RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 LRRC7Q96NW7 1537 aa17.88■□□□□ 0.45
TMEM50B-201ENST00000420455 SENP3-EIF4A1A0A087X0R7 540 aa17.87■□□□□ 0.45
TMEM50B-201ENST00000420455 WDR43Q15061 677 aaKnown RBP eCLIP17.87■□□□□ 0.45
TMEM50B-201ENST00000420455 OVOS2A0A0J9YW53 1432 aa17.87■□□□□ 0.45
TMEM50B-201ENST00000420455 OVOS2Q6IE36 1432 aa17.87■□□□□ 0.45
TMEM50B-201ENST00000420455 NCOA3Q9Y6Q9 1424 aa17.87■□□□□ 0.45
TMEM50B-201ENST00000420455 MAP2P11137 1827 aaKnown RBP17.86■□□□□ 0.45
TMEM50B-201ENST00000420455 MARF1Q9Y4F3 1742 aaKnown RBP17.86■□□□□ 0.45
TMEM50B-201ENST00000420455 PDE3BQ13370 1112 aa17.85■□□□□ 0.45
TMEM50B-201ENST00000420455 IQSEC2Q5JU85 1478 aa17.85■□□□□ 0.45
TMEM50B-201ENST00000420455 TTC21BQ7Z4L5 1316 aa17.85■□□□□ 0.45
TMEM50B-201ENST00000420455 ZNF521Q96K83 1311 aa17.85■□□□□ 0.45
TMEM50B-201ENST00000420455 PIK3C2AO00443 1686 aa17.84■□□□□ 0.45
TMEM50B-201ENST00000420455 USP31Q70CQ4 1352 aa17.84■□□□□ 0.45
TMEM50B-201ENST00000420455 TTC21AQ8NDW8 1320 aa17.83■□□□□ 0.44
TMEM50B-201ENST00000420455 NCBP3Q53F19 620 aaKnown RBP17.83■□□□□ 0.44
TMEM50B-201ENST00000420455 CFAP53Q96M91 514 aa17.83■□□□□ 0.44
TMEM50B-201ENST00000420455 CDK12Q9NYV4 1490 aaPredicted RBP17.83■□□□□ 0.44
TMEM50B-201ENST00000420455 NGEFQ8N5V2 710 aa17.83■□□□□ 0.44
TMEM50B-201ENST00000420455 NUDCQ9Y266 331 aa17.83■□□□□ 0.44
TMEM50B-201ENST00000420455 NME9Q86XW9 330 aa17.82■□□□□ 0.44
TMEM50B-201ENST00000420455 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.82■□□□□ 0.44
TMEM50B-201ENST00000420455 TNNT2P45379 298 aaPredicted RBP17.82■□□□□ 0.44
TMEM50B-201ENST00000420455 POLKQ9UBT6 870 aa17.8■□□□□ 0.44
TMEM50B-201ENST00000420455 NEFLP07196 543 aa17.8■□□□□ 0.44
TMEM50B-201ENST00000420455 DCCP43146 1447 aa17.8■□□□□ 0.44
TMEM50B-201ENST00000420455 XIRP1Q702N8 1843 aaKnown RBP17.78■□□□□ 0.44
TMEM50B-201ENST00000420455 RNF123Q5XPI4 1314 aa17.78■□□□□ 0.44
TMEM50B-201ENST00000420455 KIF1AQ12756 1690 aa17.78■□□□□ 0.44
TMEM50B-201ENST00000420455 IRX6P78412 446 aaPredicted RBP17.78■□□□□ 0.44
TMEM50B-201ENST00000420455 COG3Q96JB2 828 aa17.78■□□□□ 0.44
TMEM50B-201ENST00000420455 ZRANB1Q9UGI0 708 aa17.77■□□□□ 0.44
TMEM50B-201ENST00000420455 PEAK1Q9H792 1746 aa17.77■□□□□ 0.43
TMEM50B-201ENST00000420455 NUTM2FA1L443 756 aa17.76■□□□□ 0.43
TMEM50B-201ENST00000420455 PHF23Q9BUL5 403 aaPredicted RBP17.76■□□□□ 0.43
TMEM50B-201ENST00000420455 RUNDC1Q96C34 613 aa17.75■□□□□ 0.43
TMEM50B-201ENST00000420455 TRPM3Q9HCF6 1732 aaPredicted RBP17.74■□□□□ 0.43
TMEM50B-201ENST00000420455 PMFBP1Q8TBY8 1022 aa17.74■□□□□ 0.43
TMEM50B-201ENST00000420455 PLEKHF1Q96S99 279 aa17.74■□□□□ 0.43
TMEM50B-201ENST00000420455 RGPD1P0DJD0 1748 aa17.74■□□□□ 0.43
TMEM50B-201ENST00000420455 MST1RQ04912 1400 aa17.74■□□□□ 0.43
TMEM50B-201ENST00000420455 TRMT2AQ8IZ69 625 aaKnown RBP17.74■□□□□ 0.43
TMEM50B-201ENST00000420455 HSPA2P54652 639 aa17.73■□□□□ 0.43
TMEM50B-201ENST00000420455 NGDNQ8NEJ9 315 aaKnown RBP17.72■□□□□ 0.43
TMEM50B-201ENST00000420455 PHF8Q9UPP1 1060 aa17.72■□□□□ 0.43
TMEM50B-201ENST00000420455 CCDC27Q2M243 656 aa17.72■□□□□ 0.43
TMEM50B-201ENST00000420455 CCDC146Q8IYE0 955 aa17.72■□□□□ 0.43
TMEM50B-201ENST00000420455 C19orf44Q9H6X5 657 aa17.72■□□□□ 0.43
TMEM50B-201ENST00000420455 C1orf167Q5SNV9 1468 aa17.72■□□□□ 0.43
TMEM50B-201ENST00000420455 APAF1O14727 1248 aa17.71■□□□□ 0.43
TMEM50B-201ENST00000420455 DIAPH1O60610 1272 aaKnown RBP17.71■□□□□ 0.43
TMEM50B-201ENST00000420455 PROSER2Q86WR7 435 aaPredicted RBP17.71■□□□□ 0.43
TMEM50B-201ENST00000420455 PHRF1Q9P1Y6 1649 aaKnown RBP17.71■□□□□ 0.43
TMEM50B-201ENST00000420455 IL13P35225 146 aa17.7■□□□□ 0.42
TMEM50B-201ENST00000420455 TMEM94Q12767 1356 aa17.7■□□□□ 0.42
TMEM50B-201ENST00000420455 RBM33Q96EV2 1170 aaKnown RBP17.7■□□□□ 0.42
TMEM50B-201ENST00000420455 EMILIN1Q9Y6C2 1016 aa17.7■□□□□ 0.42
TMEM50B-201ENST00000420455 FBLN1P23142 703 aa17.69■□□□□ 0.42
TMEM50B-201ENST00000420455 KIF24Q5T7B8 1368 aa17.69■□□□□ 0.42
TMEM50B-201ENST00000420455 CDCA7LQ96GN5 454 aa17.69■□□□□ 0.42
TMEM50B-201ENST00000420455 SALL2Q9Y467 1007 aaPredicted RBP17.69■□□□□ 0.42
TMEM50B-201ENST00000420455 SLFN5Q08AF3 891 aa17.67■□□□□ 0.42
TMEM50B-201ENST00000420455 ERICH6BQ5W0A0 696 aa17.67■□□□□ 0.42
TMEM50B-201ENST00000420455 NFAT5O94916 1531 aa17.67■□□□□ 0.42
TMEM50B-201ENST00000420455 ALS2Q96Q42 1657 aa17.67■□□□□ 0.42
TMEM50B-201ENST00000420455 U2AF1L5P0DN76 240 aaPredicted RBP17.67■□□□□ 0.42
TMEM50B-201ENST00000420455 U2AF1Q01081 240 aaKnown RBP eCLIP17.67■□□□□ 0.425e-19■■■□□ 18.8
TMEM50B-201ENST00000420455 DUSP27Q5VZP5 1158 aa17.67■□□□□ 0.42
TMEM50B-201ENST00000420455 FCHSD2O94868 740 aa17.66■□□□□ 0.42
TMEM50B-201ENST00000420455 GOLGA2Q08379 1002 aa17.66■□□□□ 0.42
TMEM50B-201ENST00000420455 TCP11L2Q8N4U5 519 aa17.66■□□□□ 0.42
TMEM50B-201ENST00000420455 SLIT3O75094 1523 aa17.66■□□□□ 0.42
TMEM50B-201ENST00000420455 WWC1Q8IX03 1113 aa17.66■□□□□ 0.42
TMEM50B-201ENST00000420455 RSPH6AQ9H0K4 717 aa17.65■□□□□ 0.42
TMEM50B-201ENST00000420455 PNNQ9H307 717 aaKnown RBP17.65■□□□□ 0.42
TMEM50B-201ENST00000420455 SBNO1A3KN83 1393 aa17.64■□□□□ 0.42
TMEM50B-201ENST00000420455 RRS1Q15050 365 aaKnown RBP17.64■□□□□ 0.41
TMEM50B-201ENST00000420455 ESCO1Q5FWF5 840 aa17.63■□□□□ 0.41
TMEM50B-201ENST00000420455 WDR63Q8IWG1 891 aa17.63■□□□□ 0.41
TMEM50B-201ENST00000420455 LTN1O94822 1766 aa17.62■□□□□ 0.41
TMEM50B-201ENST00000420455 ORAI2Q96SN7 254 aa17.62■□□□□ 0.41
TMEM50B-201ENST00000420455 E9PSI1 815 aa17.61■□□□□ 0.41
TMEM50B-201ENST00000420455 FLT4P35916 1363 aa17.61■□□□□ 0.41
TMEM50B-201ENST00000420455 MAP3K19Q56UN5 1328 aa17.61■□□□□ 0.41
TMEM50B-201ENST00000420455 C14orf37Q86TY3 774 aa17.61■□□□□ 0.41
TMEM50B-201ENST00000420455 SPINK5Q9NQ38 1064 aaPredicted RBP17.61■□□□□ 0.41
TMEM50B-201ENST00000420455 RTL1A6NKG5 1358 aa17.61■□□□□ 0.41
TMEM50B-201ENST00000420455 U2SURPO15042 1029 aaKnown RBP17.61■□□□□ 0.41
TMEM50B-201ENST00000420455 DMRT2Q9Y5R5 561 aa17.6■□□□□ 0.41
TMEM50B-201ENST00000420455 RCAN3Q9UKA8 241 aa17.6■□□□□ 0.41
TMEM50B-201ENST00000420455 EIF4A2Q14240 407 aaKnown RBP17.59■□□□□ 0.41
TMEM50B-201ENST00000420455 TMPOP42166 694 aaKnown RBP17.59■□□□□ 0.41
TMEM50B-201ENST00000420455 NLRP6P59044 892 aa17.59■□□□□ 0.41
TMEM50B-201ENST00000420455 CRYBG1Q9Y4K1 1723 aa17.59■□□□□ 0.41
TMEM50B-201ENST00000420455 CADPS2Q86UW7 1296 aa17.58■□□□□ 0.41
TMEM50B-201ENST00000420455 USP19O94966 1318 aa17.58■□□□□ 0.41
TMEM50B-201ENST00000420455 MSH6P52701 1360 aa17.58■□□□□ 0.41
TMEM50B-201ENST00000420455 ABTB2Q8N961 1025 aa17.58■□□□□ 0.4
TMEM50B-201ENST00000420455 ARHGEF10O15013 1369 aa17.58■□□□□ 0.4
TMEM50B-201ENST00000420455 PPM1GO15355 546 aaPredicted RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms