RNA–Protein interactions for RNA: ENST00000420222.1

SH3PXD2A-204, Transcript of SH3 and PX domains 2A, humanhuman

TSL 2

Gene SH3PXD2A, Length 3,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-204ENST00000420222 CFAP65Q6ZU64 1925 aaKnown RBP18.57■□□□□ 0.56
SH3PXD2A-204ENST00000420222 NUCB1Q02818 461 aa18.57■□□□□ 0.56
SH3PXD2A-204ENST00000420222 ZBTB40Q9NUA8 1239 aa18.57■□□□□ 0.56
SH3PXD2A-204ENST00000420222 XPCQ01831 940 aaPredicted RBP18.56■□□□□ 0.56
SH3PXD2A-204ENST00000420222 SKOR2Q2VWA4 1001 aaPredicted RBP18.56■□□□□ 0.56
SH3PXD2A-204ENST00000420222 FOXD4L6Q3SYB3 417 aaPredicted RBP18.56■□□□□ 0.56
SH3PXD2A-204ENST00000420222 FOXD4L3Q6VB84 417 aaPredicted RBP18.56■□□□□ 0.56
SH3PXD2A-204ENST00000420222 RBM25P49756 843 aaKnown RBP18.55■□□□□ 0.56
SH3PXD2A-204ENST00000420222 PTPRTO14522 1441 aa18.55■□□□□ 0.56
SH3PXD2A-204ENST00000420222 PHF23Q9BUL5 403 aaPredicted RBP18.55■□□□□ 0.56
SH3PXD2A-204ENST00000420222 RBM27Q9P2N5 1060 aaKnown RBP18.55■□□□□ 0.56
SH3PXD2A-204ENST00000420222 IPO8O15397 1037 aaKnown RBP18.55■□□□□ 0.56
SH3PXD2A-204ENST00000420222 PKP1Q13835 747 aa18.55■□□□□ 0.56
SH3PXD2A-204ENST00000420222 CALD1Q05682 793 aaKnown RBP18.54■□□□□ 0.56
SH3PXD2A-204ENST00000420222 CCDC173Q0VFZ6 552 aa18.54■□□□□ 0.56
SH3PXD2A-204ENST00000420222 TRIM35Q9UPQ4 493 aa18.54■□□□□ 0.56
SH3PXD2A-204ENST00000420222 BAG4O95429 457 aaKnown RBP18.54■□□□□ 0.56
SH3PXD2A-204ENST00000420222 GGT6Q6P531 493 aa18.54■□□□□ 0.56
SH3PXD2A-204ENST00000420222 ZSCAN30Q86W11 494 aa18.54■□□□□ 0.56
SH3PXD2A-204ENST00000420222 NOS1P29475 1434 aa18.53■□□□□ 0.56
SH3PXD2A-204ENST00000420222 SPHKAPQ2M3C7 1700 aa18.53■□□□□ 0.56
SH3PXD2A-204ENST00000420222 NOL8Q76FK4 1167 aaKnown RBP18.53■□□□□ 0.56
SH3PXD2A-204ENST00000420222 RNF214Q8ND24 703 aa18.53■□□□□ 0.56
SH3PXD2A-204ENST00000420222 KIF2CQ99661 725 aa18.53■□□□□ 0.56
SH3PXD2A-204ENST00000420222 SLC24A1O60721 1099 aa18.53■□□□□ 0.56
SH3PXD2A-204ENST00000420222 SNX21Q969T3 373 aa18.53■□□□□ 0.56
SH3PXD2A-204ENST00000420222 TPM2P07951 284 aa18.52■□□□□ 0.56
SH3PXD2A-204ENST00000420222 HMOX1P09601 288 aa18.52■□□□□ 0.56
SH3PXD2A-204ENST00000420222 CCDC27Q2M243 656 aa18.52■□□□□ 0.56
SH3PXD2A-204ENST00000420222 PRPF40AO75400 957 aaKnown RBP18.52■□□□□ 0.55
SH3PXD2A-204ENST00000420222 IQSEC2Q5JU85 1478 aa18.51■□□□□ 0.55
SH3PXD2A-204ENST00000420222 DDIT3P35638 169 aa18.51■□□□□ 0.55
SH3PXD2A-204ENST00000420222 CIZ1Q9ULV3 898 aaPredicted RBP18.51■□□□□ 0.55
SH3PXD2A-204ENST00000420222 ISY1Q9ULR0 285 aaKnown RBP18.51■□□□□ 0.55
SH3PXD2A-204ENST00000420222 ATAD2Q6PL18 1390 aa18.5■□□□□ 0.55
SH3PXD2A-204ENST00000420222 TRPM2O94759 1503 aa18.5■□□□□ 0.55
SH3PXD2A-204ENST00000420222 SHPRHQ149N8 1683 aa18.5■□□□□ 0.55
SH3PXD2A-204ENST00000420222 KIF16BQ96L93 1317 aa18.5■□□□□ 0.55
SH3PXD2A-204ENST00000420222 ZNF518AQ6AHZ1 1483 aa18.5■□□□□ 0.55
SH3PXD2A-204ENST00000420222 BMP2KLQ5H9B9 411 aa18.49■□□□□ 0.55
SH3PXD2A-204ENST00000420222 ZMYM3Q14202 1370 aa18.49■□□□□ 0.55
SH3PXD2A-204ENST00000420222 STAC3Q96MF2 364 aa18.48■□□□□ 0.55
SH3PXD2A-204ENST00000420222 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.48■□□□□ 0.556e-8■□□□□ 8.8
SH3PXD2A-204ENST00000420222 C16orf71Q8IYS4 520 aaPredicted RBP18.48■□□□□ 0.55
SH3PXD2A-204ENST00000420222 ABCA6Q8N139 1617 aa18.47■□□□□ 0.55
SH3PXD2A-204ENST00000420222 MINK1Q8N4C8 1332 aaPredicted RBP18.47■□□□□ 0.55
SH3PXD2A-204ENST00000420222 ZSCAN23Q3MJ62 389 aa18.47■□□□□ 0.55
SH3PXD2A-204ENST00000420222 TSPYL6Q8N831 410 aa18.47■□□□□ 0.55
SH3PXD2A-204ENST00000420222 RBSNQ9H1K0 784 aa18.47■□□□□ 0.55
SH3PXD2A-204ENST00000420222 PRIM1P49642 420 aaKnown RBP18.47■□□□□ 0.55
SH3PXD2A-204ENST00000420222 CD109Q6YHK3 1445 aa18.47■□□□□ 0.55
SH3PXD2A-204ENST00000420222 ZGPATQ8N5A5 531 aaKnown RBP18.47■□□□□ 0.55
SH3PXD2A-204ENST00000420222 PDCL3Q9H2J4 239 aa18.47■□□□□ 0.55
SH3PXD2A-204ENST00000420222 PTMAP06454 111 aaKnown RBP18.46■□□□□ 0.55
SH3PXD2A-204ENST00000420222 KLHL40Q2TBA0 621 aa18.46■□□□□ 0.55
SH3PXD2A-204ENST00000420222 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.46■□□□□ 0.55
SH3PXD2A-204ENST00000420222 NCOA3Q9Y6Q9 1424 aa18.45■□□□□ 0.54
SH3PXD2A-204ENST00000420222 EVC2Q86UK5 1308 aa18.45■□□□□ 0.54
SH3PXD2A-204ENST00000420222 PRKAR2BP31323 418 aa18.45■□□□□ 0.54
SH3PXD2A-204ENST00000420222 PRDM10Q9NQV6 1147 aa18.45■□□□□ 0.54
SH3PXD2A-204ENST00000420222 UQCRHLA0A096LP55 91 aa18.45■□□□□ 0.54
SH3PXD2A-204ENST00000420222 CDC45O75419 566 aa18.45■□□□□ 0.54
SH3PXD2A-204ENST00000420222 UQCRHP07919 91 aa18.45■□□□□ 0.54
SH3PXD2A-204ENST00000420222 SYCE3A1L190 88 aa18.45■□□□□ 0.54
SH3PXD2A-204ENST00000420222 DIAPH1O60610 1272 aaKnown RBP18.44■□□□□ 0.54
SH3PXD2A-204ENST00000420222 DNTTIP2Q5QJE6 756 aaKnown RBP18.44■□□□□ 0.54
SH3PXD2A-204ENST00000420222 SMARCA5O60264 1052 aaPredicted RBP18.43■□□□□ 0.54
SH3PXD2A-204ENST00000420222 OTUD7AQ8TE49 926 aaPredicted RBP18.43■□□□□ 0.54
SH3PXD2A-204ENST00000420222 PLCH2O75038 1416 aa18.43■□□□□ 0.54
SH3PXD2A-204ENST00000420222 OFD1O75665 1012 aa18.43■□□□□ 0.54
SH3PXD2A-204ENST00000420222 PTMSP20962 102 aa18.43■□□□□ 0.54
SH3PXD2A-204ENST00000420222 PLEKHF1Q96S99 279 aa18.43■□□□□ 0.54
SH3PXD2A-204ENST00000420222 CT47B1P0C2W7 299 aaPredicted RBP18.42■□□□□ 0.54
SH3PXD2A-204ENST00000420222 PPIP5K1Q6PFW1 1433 aa18.42■□□□□ 0.54
SH3PXD2A-204ENST00000420222 GSPT1P15170 499 aaKnown RBP18.41■□□□□ 0.54
SH3PXD2A-204ENST00000420222 SIRT2Q8IXJ6 389 aa18.41■□□□□ 0.54
SH3PXD2A-204ENST00000420222 PPP1R9BQ96SB3 815 aa18.41■□□□□ 0.54
SH3PXD2A-204ENST00000420222 MAP3K4Q9Y6R4 1608 aa18.41■□□□□ 0.54
SH3PXD2A-204ENST00000420222 ZBTB7BO15156 539 aaPredicted RBP18.41■□□□□ 0.54
SH3PXD2A-204ENST00000420222 ERCC6L2Q5T890 1561 aa18.4■□□□□ 0.54
SH3PXD2A-204ENST00000420222 GCC1Q96CN9 775 aa18.4■□□□□ 0.54
SH3PXD2A-204ENST00000420222 ABCC11Q96J66 1382 aa18.39■□□□□ 0.53
SH3PXD2A-204ENST00000420222 NSFL1CQ9UNZ2 370 aaKnown RBP18.39■□□□□ 0.53
SH3PXD2A-204ENST00000420222 DCTN1Q14203 1278 aa18.38■□□□□ 0.53
SH3PXD2A-204ENST00000420222 JARID2Q92833 1246 aaPredicted RBP18.38■□□□□ 0.53
SH3PXD2A-204ENST00000420222 LMBRD1Q9NUN5 540 aa18.38■□□□□ 0.53
SH3PXD2A-204ENST00000420222 PLCB2Q00722 1185 aa18.38■□□□□ 0.53
SH3PXD2A-204ENST00000420222 PHACTR3Q96KR7 559 aa18.38■□□□□ 0.53
SH3PXD2A-204ENST00000420222 C14orf93Q9H972 538 aaKnown RBP18.38■□□□□ 0.53
SH3PXD2A-204ENST00000420222 GPT2Q8TD30 523 aa18.37■□□□□ 0.53
SH3PXD2A-204ENST00000420222 NUCB2P80303 420 aa18.37■□□□□ 0.53
SH3PXD2A-204ENST00000420222 A0A1W2PP64 1363 aa18.37■□□□□ 0.53
SH3PXD2A-204ENST00000420222 RABEP1Q15276 862 aa18.36■□□□□ 0.53
SH3PXD2A-204ENST00000420222 TSC1Q92574 1164 aa18.36■□□□□ 0.53
SH3PXD2A-204ENST00000420222 GDPD2Q9HCC8 539 aa18.36■□□□□ 0.53
SH3PXD2A-204ENST00000420222 FAM83GA6ND36 823 aa18.36■□□□□ 0.53
SH3PXD2A-204ENST00000420222 FYB1O15117 783 aa18.36■□□□□ 0.53
SH3PXD2A-204ENST00000420222 TSHZ3Q63HK5 1081 aa18.36■□□□□ 0.53
SH3PXD2A-204ENST00000420222 FAM177BA6PVY3 158 aa18.35■□□□□ 0.53
SH3PXD2A-204ENST00000420222 ABCC1P33527 1531 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms