RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 COL14A1Q05707 1796 aaKnown RBP15.96■□□□□ 0.15
SSBP3-206ENST00000420121 UNC5CLQ8IV45 518 aa15.96■□□□□ 0.15
SSBP3-206ENST00000420121 GJD4Q96KN9 370 aaPredicted RBP15.96■□□□□ 0.15
SSBP3-206ENST00000420121 LMOD2Q6P5Q4 547 aa15.95■□□□□ 0.14
SSBP3-206ENST00000420121 NGDNQ8NEJ9 315 aaKnown RBP15.95■□□□□ 0.14
SSBP3-206ENST00000420121 CENPJQ9HC77 1338 aaPredicted RBP15.94■□□□□ 0.14
SSBP3-206ENST00000420121 PLEKHG5O94827 1062 aa15.94■□□□□ 0.14
SSBP3-206ENST00000420121 PLEKHG3A1L390 1219 aa15.93■□□□□ 0.14
SSBP3-206ENST00000420121 FAM83GA6ND36 823 aa15.93■□□□□ 0.14
SSBP3-206ENST00000420121 NEUROD1Q13562 356 aa15.93■□□□□ 0.14
SSBP3-206ENST00000420121 ACEP12821 1306 aa15.93■□□□□ 0.14
SSBP3-206ENST00000420121 HAP1P54257 671 aaPredicted RBP15.92■□□□□ 0.14
SSBP3-206ENST00000420121 CCDC61Q9Y6R9 512 aa15.92■□□□□ 0.14
SSBP3-206ENST00000420121 NBPF8Q3BBV2 869 aa15.91■□□□□ 0.14
SSBP3-206ENST00000420121 ATAD2Q6PL18 1390 aa15.9■□□□□ 0.14
SSBP3-206ENST00000420121 VPS72Q15906 364 aa15.9■□□□□ 0.14
SSBP3-206ENST00000420121 PPIP5K1Q6PFW1 1433 aa15.9■□□□□ 0.14
SSBP3-206ENST00000420121 NRKQ7Z2Y5 1582 aa15.9■□□□□ 0.14
SSBP3-206ENST00000420121 PAK3O75914 559 aaPredicted RBP15.89■□□□□ 0.13
SSBP3-206ENST00000420121 ROCK2O75116 1388 aaKnown RBP15.88■□□□□ 0.13
SSBP3-206ENST00000420121 CABP2Q9NPB3 220 aa15.88■□□□□ 0.13
SSBP3-206ENST00000420121 AKAP12Q02952 1782 aa15.87■□□□□ 0.13
SSBP3-206ENST00000420121 ONECUT3O60422 494 aaPredicted RBP15.87■□□□□ 0.13
SSBP3-206ENST00000420121 LMO7Q8WWI1 1683 aa15.86■□□□□ 0.13
SSBP3-206ENST00000420121 SRPK2P78362 688 aaKnown RBP15.86■□□□□ 0.13
SSBP3-206ENST00000420121 BTG4Q9NY30 223 aa15.86■□□□□ 0.13
SSBP3-206ENST00000420121 TRIM26Q12899 539 aaPredicted RBP15.85■□□□□ 0.13
SSBP3-206ENST00000420121 PIK3C2AO00443 1686 aa15.85■□□□□ 0.13
SSBP3-206ENST00000420121 THSD7AQ9UPZ6 1657 aa15.85■□□□□ 0.13
SSBP3-206ENST00000420121 KIAA0232Q92628 1395 aa15.85■□□□□ 0.13
SSBP3-206ENST00000420121 SSH2Q76I76 1423 aa15.85■□□□□ 0.13
SSBP3-206ENST00000420121 NUTM2GQ5VZR2 741 aa15.84■□□□□ 0.13
SSBP3-206ENST00000420121 USP19O94966 1318 aa15.84■□□□□ 0.13
SSBP3-206ENST00000420121 USP6P35125 1406 aa15.84■□□□□ 0.13
SSBP3-206ENST00000420121 KCNA4P22459 653 aa15.83■□□□□ 0.12
SSBP3-206ENST00000420121 SEPT12Q8IYM1 358 aa15.83■□□□□ 0.12
SSBP3-206ENST00000420121 PRDM11Q9NQV5 511 aa15.82■□□□□ 0.12
SSBP3-206ENST00000420121 CABP1Q9NZU7 370 aa15.82■□□□□ 0.12
SSBP3-206ENST00000420121 EVC2Q86UK5 1308 aa15.82■□□□□ 0.12
SSBP3-206ENST00000420121 BRD4O60885 1362 aaPredicted RBP15.82■□□□□ 0.12
SSBP3-206ENST00000420121 SBNO2Q9Y2G9 1366 aa15.82■□□□□ 0.12
SSBP3-206ENST00000420121 SLIT3O75094 1523 aa15.81■□□□□ 0.12
SSBP3-206ENST00000420121 SPATA31A5Q5VU36 1347 aa15.81■□□□□ 0.12
SSBP3-206ENST00000420121 MON2Q7Z3U7 1717 aa15.81■□□□□ 0.12
SSBP3-206ENST00000420121 SPATA31A7Q8IWB4 1347 aa15.81■□□□□ 0.12
SSBP3-206ENST00000420121 CAMTA1Q9Y6Y1 1673 aa15.81■□□□□ 0.12
SSBP3-206ENST00000420121 CPDO75976 1380 aa15.8■□□□□ 0.12
SSBP3-206ENST00000420121 CHRNA2Q15822 529 aa15.8■□□□□ 0.12
SSBP3-206ENST00000420121 ABTB2Q8N961 1025 aa15.8■□□□□ 0.12
SSBP3-206ENST00000420121 CCDC9Q9Y3X0 531 aaKnown RBP15.8■□□□□ 0.12
SSBP3-206ENST00000420121 COL18A1P39060 1754 aa15.8■□□□□ 0.12
SSBP3-206ENST00000420121 TONSLQ96HA7 1378 aa15.79■□□□□ 0.12
SSBP3-206ENST00000420121 ZC3H6P61129 1189 aaKnown RBP15.79■□□□□ 0.12
SSBP3-206ENST00000420121 CPSF1Q10570 1443 aaKnown RBP15.78■□□□□ 0.12
SSBP3-206ENST00000420121 MAPK8IP2Q13387 824 aaPredicted RBP15.78■□□□□ 0.12
SSBP3-206ENST00000420121 FAM98CQ17RN3 349 aaKnown RBP15.78■□□□□ 0.12
SSBP3-206ENST00000420121 BLMP54132 1417 aaPredicted RBP15.77■□□□□ 0.12
SSBP3-206ENST00000420121 USP54Q70EL1 1684 aa15.76■□□□□ 0.11
SSBP3-206ENST00000420121 SPATA31A1Q5TZJ5 1347 aa15.76■□□□□ 0.11
SSBP3-206ENST00000420121 GCP02774 474 aa15.76■□□□□ 0.11
SSBP3-206ENST00000420121 KRT27Q7Z3Y8 459 aa15.76■□□□□ 0.11
SSBP3-206ENST00000420121 NLRP13Q86W25 1043 aa15.76■□□□□ 0.11
SSBP3-206ENST00000420121 CCDC125Q86Z20 511 aa15.76■□□□□ 0.11
SSBP3-206ENST00000420121 CARD11Q9BXL7 1154 aa15.76■□□□□ 0.11
SSBP3-206ENST00000420121 CD163L1Q9NR16 1453 aa15.76■□□□□ 0.11
SSBP3-206ENST00000420121 RGPD5Q99666 1765 aa15.75■□□□□ 0.11
SSBP3-206ENST00000420121 TNS1Q9HBL0 1735 aaKnown RBP15.74■□□□□ 0.11
SSBP3-206ENST00000420121 RGPD1P0DJD0 1748 aa15.74■□□□□ 0.11
SSBP3-206ENST00000420121 TTC21BQ7Z4L5 1316 aa15.73■□□□□ 0.11
SSBP3-206ENST00000420121 COL5A2P05997 1499 aaPredicted RBP15.73■□□□□ 0.11
SSBP3-206ENST00000420121 STRN4Q9NRL3 753 aa15.73■□□□□ 0.11
SSBP3-206ENST00000420121 NLRP6P59044 892 aa15.72■□□□□ 0.11
SSBP3-206ENST00000420121 WNK3Q9BYP7 1800 aa15.72■□□□□ 0.11
SSBP3-206ENST00000420121 NFAT5O94916 1531 aa15.72■□□□□ 0.11
SSBP3-206ENST00000420121 PARP4Q9UKK3 1724 aaKnown RBP15.71■□□□□ 0.11
SSBP3-206ENST00000420121 ZNF692Q9BU19 519 aaPredicted RBP15.71■□□□□ 0.11
SSBP3-206ENST00000420121 A0A0G2JS52 829 aa15.7■□□□□ 0.1
SSBP3-206ENST00000420121 MYT1Q01538 1121 aa15.7■□□□□ 0.1
SSBP3-206ENST00000420121 FAM182BQ5T319 152 aa15.7■□□□□ 0.1
SSBP3-206ENST00000420121 LARP1Q6PKG0 1096 aaKnown RBP15.7■□□□□ 0.1
SSBP3-206ENST00000420121 DEFB132Q7Z7B7 95 aa15.7■□□□□ 0.1
SSBP3-206ENST00000420121 AATKQ6ZMQ8 1374 aa15.7■□□□□ 0.1
SSBP3-206ENST00000420121 KTN1Q86UP2 1357 aaKnown RBP15.7■□□□□ 0.1
SSBP3-206ENST00000420121 TTC21AQ8NDW8 1320 aa15.69■□□□□ 0.1
SSBP3-206ENST00000420121 TESK2Q96S53 571 aa15.69■□□□□ 0.1
SSBP3-206ENST00000420121 BARGINQ6ZT62 677 aa15.68■□□□□ 0.1
SSBP3-206ENST00000420121 LTN1O94822 1766 aa15.67■□□□□ 0.1
SSBP3-206ENST00000420121 SRCAPQ6ZRS2 3230 aa15.67■□□□□ 0.1
SSBP3-206ENST00000420121 CRB1P82279 1406 aa15.67■□□□□ 0.1
SSBP3-206ENST00000420121 PEAK1Q9H792 1746 aa15.66■□□□□ 0.1
SSBP3-206ENST00000420121 USP31Q70CQ4 1352 aa15.66■□□□□ 0.1
SSBP3-206ENST00000420121 LRRC37A3O60309 1634 aa15.66■□□□□ 0.1
SSBP3-206ENST00000420121 EVA1CP58658 441 aa15.66■□□□□ 0.1
SSBP3-206ENST00000420121 ARHGEF25Q86VW2 580 aa15.66■□□□□ 0.1
SSBP3-206ENST00000420121 PUS7Q96PZ0 661 aaKnown RBP15.66■□□□□ 0.1
SSBP3-206ENST00000420121 SLC12A5Q9H2X9 1139 aa15.66■□□□□ 0.1
SSBP3-206ENST00000420121 USP35Q9P2H5 1018 aa15.66■□□□□ 0.1
SSBP3-206ENST00000420121 ZRANB1Q9UGI0 708 aa15.66■□□□□ 0.1
SSBP3-206ENST00000420121 AXIN2Q9Y2T1 843 aa15.66■□□□□ 0.1
SSBP3-206ENST00000420121 ST20-MTHFSA0A0A6YYL1 179 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms