RNA–Protein interactions for RNA: ENST00000419582.5

PTPA-213, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-213ENST00000419582 RGPD8O14715 1765 aaPredicted RBP22.78■■□□□ 1.24
PTPA-213ENST00000419582 PLEKHG5O94827 1062 aa22.78■■□□□ 1.24
PTPA-213ENST00000419582 KCNQ2O43526 872 aa22.77■■□□□ 1.24
PTPA-213ENST00000419582 IFT172Q9UG01 1749 aa22.77■■□□□ 1.23
PTPA-213ENST00000419582 RGL3Q3MIN7 710 aa22.75■■□□□ 1.23
PTPA-213ENST00000419582 PMFBP1Q8TBY8 1022 aa22.75■■□□□ 1.23
PTPA-213ENST00000419582 GPRASP1Q5JY77 1395 aa22.75■■□□□ 1.23
PTPA-213ENST00000419582 DHX57Q6P158 1386 aaKnown RBP22.75■■□□□ 1.23
PTPA-213ENST00000419582 RREB1Q92766 1687 aa22.74■■□□□ 1.23
PTPA-213ENST00000419582 TRPM3Q9HCF6 1732 aaPredicted RBP22.74■■□□□ 1.23
PTPA-213ENST00000419582 UTRNP46939 3433 aa22.73■■□□□ 1.23
PTPA-213ENST00000419582 BARGINQ6ZT62 677 aa22.73■■□□□ 1.23
PTPA-213ENST00000419582 PPP1R1BQ9UD71 204 aaPredicted RBP22.73■■□□□ 1.23
PTPA-213ENST00000419582 ALS2Q96Q42 1657 aa22.73■■□□□ 1.23
PTPA-213ENST00000419582 PRDM11Q9NQV5 511 aa22.72■■□□□ 1.23
PTPA-213ENST00000419582 ACIN1Q9UKV3 1341 aaKnown RBP22.72■■□□□ 1.23
PTPA-213ENST00000419582 C11orf95C9JLR9 678 aaPredicted RBP22.71■■□□□ 1.23
PTPA-213ENST00000419582 PRAM1Q96QH2 718 aa22.71■■□□□ 1.23
PTPA-213ENST00000419582 PDE3BQ13370 1112 aa22.68■■□□□ 1.22
PTPA-213ENST00000419582 NUP188Q5SRE5 1749 aa22.68■■□□□ 1.22
PTPA-213ENST00000419582 DLC1Q96QB1 1528 aa22.67■■□□□ 1.22
PTPA-213ENST00000419582 EIF3AQ14152 1382 aaKnown RBP22.67■■□□□ 1.22
PTPA-213ENST00000419582 ZNF784Q8NCA9 323 aaPredicted RBP22.66■■□□□ 1.22
PTPA-213ENST00000419582 CRYBG1Q9Y4K1 1723 aa22.65■■□□□ 1.22
PTPA-213ENST00000419582 CFAP70Q5T0N1 1121 aa22.64■■□□□ 1.21
PTPA-213ENST00000419582 POGKQ9P215 609 aa22.64■■□□□ 1.21
PTPA-213ENST00000419582 KIAA0232Q92628 1395 aa22.63■■□□□ 1.21
PTPA-213ENST00000419582 IFFO2Q5TF58 517 aa22.63■■□□□ 1.21
PTPA-213ENST00000419582 PRR36Q9H6K5 1346 aa22.62■■□□□ 1.21
PTPA-213ENST00000419582 PLSCR1O15162 318 aa22.62■■□□□ 1.21
PTPA-213ENST00000419582 SAFB2Q14151 953 aaKnown RBP eCLIP22.62■■□□□ 1.21
PTPA-213ENST00000419582 THRAP3Q9Y2W1 955 aaKnown RBP22.61■■□□□ 1.21
PTPA-213ENST00000419582 TCP11L2Q8N4U5 519 aa22.59■■□□□ 1.21
PTPA-213ENST00000419582 NGDNQ8NEJ9 315 aaKnown RBP22.59■■□□□ 1.21
PTPA-213ENST00000419582 STRN4Q9NRL3 753 aa22.59■■□□□ 1.21
PTPA-213ENST00000419582 WASLO00401 505 aaPredicted RBP22.58■■□□□ 1.21
PTPA-213ENST00000419582 CHRNA2Q15822 529 aa22.58■■□□□ 1.21
PTPA-213ENST00000419582 SSH2Q76I76 1423 aa22.57■■□□□ 1.2
PTPA-213ENST00000419582 TULP4Q9NRJ4 1543 aa22.57■■□□□ 1.2
PTPA-213ENST00000419582 PAK3O75914 559 aaPredicted RBP22.57■■□□□ 1.2
PTPA-213ENST00000419582 EVA1CP58658 441 aa22.57■■□□□ 1.2
PTPA-213ENST00000419582 C1QTNF8P60827 252 aa22.56■■□□□ 1.2
PTPA-213ENST00000419582 MPHOSPH9Q99550 1183 aa22.55■■□□□ 1.2
PTPA-213ENST00000419582 USP35Q9P2H5 1018 aa22.55■■□□□ 1.2
PTPA-213ENST00000419582 CEP350Q5VT06 3117 aa22.54■■□□□ 1.2
PTPA-213ENST00000419582 ZC3H6P61129 1189 aaKnown RBP22.54■■□□□ 1.2
PTPA-213ENST00000419582 CPDO75976 1380 aa22.53■■□□□ 1.2
PTPA-213ENST00000419582 SENP3-EIF4A1A0A087X0R7 540 aa22.53■■□□□ 1.2
PTPA-213ENST00000419582 PTGER2P43116 358 aa22.53■■□□□ 1.2
PTPA-213ENST00000419582 LARP1Q6PKG0 1096 aaKnown RBP22.53■■□□□ 1.2
PTPA-213ENST00000419582 ATP7BP35670 1465 aa22.53■■□□□ 1.2
PTPA-213ENST00000419582 RGPD3A6NKT7 1758 aaPredicted RBP22.53■■□□□ 1.2
PTPA-213ENST00000419582 RGPD4Q7Z3J3 1758 aa22.53■■□□□ 1.2
PTPA-213ENST00000419582 CAMTA1Q9Y6Y1 1673 aa22.52■■□□□ 1.2
PTPA-213ENST00000419582 HIRIP3Q9BW71 556 aaPredicted RBP22.52■■□□□ 1.2
PTPA-213ENST00000419582 CASZ1Q86V15 1759 aa22.5■■□□□ 1.19
PTPA-213ENST00000419582 ADGRB1O14514 1584 aa22.5■■□□□ 1.19
PTPA-213ENST00000419582 PPARGC1BQ86YN6 1023 aaKnown RBP22.49■■□□□ 1.19
PTPA-213ENST00000419582 SYT17Q9BSW7 474 aa22.49■■□□□ 1.19
PTPA-213ENST00000419582 ANO8Q9HCE9 1232 aaPredicted RBP22.49■■□□□ 1.19
PTPA-213ENST00000419582 MINK1Q8N4C8 1332 aaPredicted RBP22.49■■□□□ 1.19
PTPA-213ENST00000419582 BCL11BQ9C0K0 894 aaPredicted RBP22.48■■□□□ 1.19
PTPA-213ENST00000419582 TRAK1Q9UPV9 953 aa22.48■■□□□ 1.19
PTPA-213ENST00000419582 PHRF1Q9P1Y6 1649 aaKnown RBP22.48■■□□□ 1.19
PTPA-213ENST00000419582 OVOS2A0A0G2JMS6 1433 aa22.48■■□□□ 1.19
PTPA-213ENST00000419582 OVOS2A0A0J9YW53 1432 aa22.48■■□□□ 1.19
PTPA-213ENST00000419582 OVOS2Q6IE36 1432 aa22.48■■□□□ 1.19
PTPA-213ENST00000419582 PROM2Q8N271 834 aa22.47■■□□□ 1.19
PTPA-213ENST00000419582 NRKQ7Z2Y5 1582 aa22.46■■□□□ 1.19
PTPA-213ENST00000419582 PARP4Q9UKK3 1724 aaKnown RBP22.46■■□□□ 1.19
PTPA-213ENST00000419582 NUDT16Q96DE0 195 aaKnown RBP22.46■■□□□ 1.19
PTPA-213ENST00000419582 POLR3AO14802 1390 aaPredicted RBP22.46■■□□□ 1.19
PTPA-213ENST00000419582 BCL9O00512 1426 aa22.46■■□□□ 1.19
PTPA-213ENST00000419582 PDGFDQ9GZP0 370 aaPredicted RBP22.45■■□□□ 1.18
PTPA-213ENST00000419582 LMO7Q8WWI1 1683 aa22.45■■□□□ 1.18
PTPA-213ENST00000419582 PEAK1Q9H792 1746 aa22.45■■□□□ 1.18
PTPA-213ENST00000419582 USP19O94966 1318 aa22.44■■□□□ 1.18
PTPA-213ENST00000419582 ZBTB7AO95365 584 aa22.43■■□□□ 1.18
PTPA-213ENST00000419582 SGIP1Q9BQI5 828 aa22.43■■□□□ 1.18
PTPA-213ENST00000419582 FHDC1Q9C0D6 1143 aaPredicted RBP22.43■■□□□ 1.18
PTPA-213ENST00000419582 STAC3Q96MF2 364 aa22.42■■□□□ 1.18
PTPA-213ENST00000419582 PLEKHG3A1L390 1219 aa22.41■■□□□ 1.18
PTPA-213ENST00000419582 CHD4Q14839 1912 aa22.41■■□□□ 1.18
PTPA-213ENST00000419582 CRB1P82279 1406 aa22.4■■□□□ 1.18
PTPA-213ENST00000419582 MAP3K5Q99683 1374 aa22.4■■□□□ 1.18
PTPA-213ENST00000419582 NUTM2GQ5VZR2 741 aa22.4■■□□□ 1.18
PTPA-213ENST00000419582 MTFR1LQ9H019 292 aa22.4■■□□□ 1.18
PTPA-213ENST00000419582 COL5A2P05997 1499 aaPredicted RBP22.4■■□□□ 1.18
PTPA-213ENST00000419582 GCP02774 474 aa22.39■■□□□ 1.17
PTPA-213ENST00000419582 SLC15A2Q16348 729 aa22.39■■□□□ 1.17
PTPA-213ENST00000419582 ABTB2Q8N961 1025 aa22.39■■□□□ 1.17
PTPA-213ENST00000419582 ATF5Q9Y2D1 282 aaPredicted RBP22.39■■□□□ 1.17
PTPA-213ENST00000419582 CCDC61Q9Y6R9 512 aa22.39■■□□□ 1.17
PTPA-213ENST00000419582 ACEP12821 1306 aa22.38■■□□□ 1.17
PTPA-213ENST00000419582 ITSN1Q15811 1721 aa22.38■■□□□ 1.17
PTPA-213ENST00000419582 DDB1Q16531 1140 aa22.38■■□□□ 1.17
PTPA-213ENST00000419582 MYOM1P52179 1685 aa22.38■■□□□ 1.17
PTPA-213ENST00000419582 AATKQ6ZMQ8 1374 aa22.38■■□□□ 1.17
PTPA-213ENST00000419582 SBF2Q86WG5 1849 aa22.37■■□□□ 1.17
PTPA-213ENST00000419582 NLRP13Q86W25 1043 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms