RNA–Protein interactions for RNA: ENST00000417578.5

SNHG17-203, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2 BASIC

Gene SNHG17, Length 880 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-203ENST00000417578 BRD4O60885 1362 aaPredicted RBP22.75■■□□□ 1.23
SNHG17-203ENST00000417578 POTEAQ6S8J7 498 aa22.74■■□□□ 1.23
SNHG17-203ENST00000417578 TESK2Q96S53 571 aa22.74■■□□□ 1.23
SNHG17-203ENST00000417578 ZNF692Q9BU19 519 aaPredicted RBP22.73■■□□□ 1.23
SNHG17-203ENST00000417578 CABLES1Q8TDN4 633 aa22.72■■□□□ 1.23
SNHG17-203ENST00000417578 PLEKHG5O94827 1062 aa22.71■■□□□ 1.23
SNHG17-203ENST00000417578 FNBP4Q8N3X1 1017 aaPredicted RBP22.7■■□□□ 1.22
SNHG17-203ENST00000417578 TMF1P82094 1093 aa22.69■■□□□ 1.22
SNHG17-203ENST00000417578 ABTB2Q8N961 1025 aa22.69■■□□□ 1.22
SNHG17-203ENST00000417578 USP6P35125 1406 aa22.68■■□□□ 1.22
SNHG17-203ENST00000417578 TMC1Q8TDI8 760 aa22.68■■□□□ 1.22
SNHG17-203ENST00000417578 USP21Q9UK80 565 aa22.68■■□□□ 1.22
SNHG17-203ENST00000417578 ABCA3Q99758 1704 aa22.68■■□□□ 1.22
SNHG17-203ENST00000417578 AKAP12Q02952 1782 aa22.66■■□□□ 1.22
SNHG17-203ENST00000417578 QTRT2Q9H974 415 aaKnown RBP22.66■■□□□ 1.22
SNHG17-203ENST00000417578 CDCA8Q53HL2 280 aa22.65■■□□□ 1.22
SNHG17-203ENST00000417578 NLRP13Q86W25 1043 aa22.65■■□□□ 1.22
SNHG17-203ENST00000417578 RXRBP28702 533 aa22.64■■□□□ 1.21
SNHG17-203ENST00000417578 CPSF1Q10570 1443 aaKnown RBP22.64■■□□□ 1.21
SNHG17-203ENST00000417578 KTN1Q86UP2 1357 aaKnown RBP22.63■■□□□ 1.21
SNHG17-203ENST00000417578 NUTM2GQ5VZR2 741 aa22.63■■□□□ 1.21
SNHG17-203ENST00000417578 HDGFL2Q7Z4V5 671 aaPredicted RBP22.63■■□□□ 1.21
SNHG17-203ENST00000417578 SLC12A5Q9H2X9 1139 aa22.63■■□□□ 1.21
SNHG17-203ENST00000417578 TERF2IPQ9NYB0 399 aa22.63■■□□□ 1.21
SNHG17-203ENST00000417578 TRPC5Q9UL62 973 aaPredicted RBP22.63■■□□□ 1.21
SNHG17-203ENST00000417578 NINLQ9Y2I6 1382 aa22.63■■□□□ 1.21
SNHG17-203ENST00000417578 CRYBG1Q9Y4K1 1723 aa22.62■■□□□ 1.21
SNHG17-203ENST00000417578 EIF4G2P78344 907 aaKnown RBP eCLIP22.62■■□□□ 1.213e-13■■■■□ 22.9
SNHG17-203ENST00000417578 SSH2Q76I76 1423 aa22.62■■□□□ 1.21
SNHG17-203ENST00000417578 TTC21BQ7Z4L5 1316 aa22.6■■□□□ 1.21
SNHG17-203ENST00000417578 TTC21AQ8NDW8 1320 aa22.6■■□□□ 1.21
SNHG17-203ENST00000417578 SOCS7O14512 581 aa22.6■■□□□ 1.21
SNHG17-203ENST00000417578 RBM6P78332 1123 aaKnown RBP22.6■■□□□ 1.21
SNHG17-203ENST00000417578 SLIT2O94813 1529 aa22.59■■□□□ 1.21
SNHG17-203ENST00000417578 FAM83GA6ND36 823 aa22.59■■□□□ 1.21
SNHG17-203ENST00000417578 NLRP6P59044 892 aa22.59■■□□□ 1.21
SNHG17-203ENST00000417578 UNC5CLQ8IV45 518 aa22.59■■□□□ 1.21
SNHG17-203ENST00000417578 PHRF1Q9P1Y6 1649 aaKnown RBP22.59■■□□□ 1.21
SNHG17-203ENST00000417578 MON2Q7Z3U7 1717 aa22.59■■□□□ 1.21
SNHG17-203ENST00000417578 BCL9LQ86UU0 1499 aa22.59■■□□□ 1.21
SNHG17-203ENST00000417578 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.57■■□□□ 1.2
SNHG17-203ENST00000417578 NWD2Q9ULI1 1742 aa22.57■■□□□ 1.2
SNHG17-203ENST00000417578 CD163L1Q9NR16 1453 aa22.57■■□□□ 1.2
SNHG17-203ENST00000417578 USP19O94966 1318 aa22.57■■□□□ 1.2
SNHG17-203ENST00000417578 COL14A1Q05707 1796 aaKnown RBP22.56■■□□□ 1.2
SNHG17-203ENST00000417578 PLCH1Q4KWH8 1693 aa22.56■■□□□ 1.2
SNHG17-203ENST00000417578 PRDM11Q9NQV5 511 aa22.56■■□□□ 1.2
SNHG17-203ENST00000417578 ATRNO75882 1429 aa22.56■■□□□ 1.2
SNHG17-203ENST00000417578 HSPA5P11021 654 aaKnown RBP22.55■■□□□ 1.2
SNHG17-203ENST00000417578 NRKQ7Z2Y5 1582 aa22.55■■□□□ 1.2
SNHG17-203ENST00000417578 GCP02774 474 aa22.54■■□□□ 1.2
SNHG17-203ENST00000417578 ZC3H6P61129 1189 aaKnown RBP22.54■■□□□ 1.2
SNHG17-203ENST00000417578 PIK3C2AO00443 1686 aa22.54■■□□□ 1.2
SNHG17-203ENST00000417578 CDK12Q9NYV4 1490 aaPredicted RBP22.54■■□□□ 1.2
SNHG17-203ENST00000417578 A0A1W2PP64 1363 aa22.53■■□□□ 1.2
SNHG17-203ENST00000417578 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.53■■□□□ 1.27e-6■■□□□ 11.5
SNHG17-203ENST00000417578 BTG4Q9NY30 223 aa22.53■■□□□ 1.2
SNHG17-203ENST00000417578 EDC4Q6P2E9 1401 aaKnown RBP22.53■■□□□ 1.2
SNHG17-203ENST00000417578 KIAA0232Q92628 1395 aa22.52■■□□□ 1.2
SNHG17-203ENST00000417578 GJD4Q96KN9 370 aaPredicted RBP22.52■■□□□ 1.2
SNHG17-203ENST00000417578 CPDO75976 1380 aa22.5■■□□□ 1.19
SNHG17-203ENST00000417578 VPS72Q15906 364 aa22.5■■□□□ 1.19
SNHG17-203ENST00000417578 KCNH5Q8NCM2 988 aa22.5■■□□□ 1.19
SNHG17-203ENST00000417578 ANKRD36BQ8N2N9 1353 aa22.5■■□□□ 1.19
SNHG17-203ENST00000417578 SLIT3O75094 1523 aa22.49■■□□□ 1.19
SNHG17-203ENST00000417578 CHRNA2Q15822 529 aa22.48■■□□□ 1.19
SNHG17-203ENST00000417578 USP31Q70CQ4 1352 aa22.48■■□□□ 1.19
SNHG17-203ENST00000417578 CCDC9Q9Y3X0 531 aaKnown RBP22.47■■□□□ 1.19
SNHG17-203ENST00000417578 NRAPQ86VF7 1730 aa22.46■■□□□ 1.19
SNHG17-203ENST00000417578 NME9Q86XW9 330 aa22.46■■□□□ 1.19
SNHG17-203ENST00000417578 USP54Q70EL1 1684 aa22.44■■□□□ 1.18
SNHG17-203ENST00000417578 RGS12O14924 1447 aa22.43■■□□□ 1.18
SNHG17-203ENST00000417578 EVA1CP58658 441 aa22.43■■□□□ 1.18
SNHG17-203ENST00000417578 POLR3GLQ9BT43 218 aa22.43■■□□□ 1.18
SNHG17-203ENST00000417578 ZRANB1Q9UGI0 708 aa22.43■■□□□ 1.18
SNHG17-203ENST00000417578 ZBTB7CA1YPR0 619 aa22.42■■□□□ 1.18
SNHG17-203ENST00000417578 GLI3P10071 1580 aa22.42■■□□□ 1.18
SNHG17-203ENST00000417578 AATKQ6ZMQ8 1374 aa22.41■■□□□ 1.18
SNHG17-203ENST00000417578 SOX12O15370 315 aa22.41■■□□□ 1.18
SNHG17-203ENST00000417578 STRN4Q9NRL3 753 aa22.41■■□□□ 1.18
SNHG17-203ENST00000417578 MYOM1P52179 1685 aa22.41■■□□□ 1.18
SNHG17-203ENST00000417578 LMO7Q8WWI1 1683 aa22.4■■□□□ 1.18
SNHG17-203ENST00000417578 ARHGEF25Q86VW2 580 aa22.4■■□□□ 1.18
SNHG17-203ENST00000417578 CAMTA1Q9Y6Y1 1673 aa22.39■■□□□ 1.18
SNHG17-203ENST00000417578 COG3Q96JB2 828 aa22.39■■□□□ 1.17
SNHG17-203ENST00000417578 SPATA31A5Q5VU36 1347 aa22.38■■□□□ 1.17
SNHG17-203ENST00000417578 SPATA31A7Q8IWB4 1347 aa22.38■■□□□ 1.17
SNHG17-203ENST00000417578 ONECUT3O60422 494 aaPredicted RBP22.38■■□□□ 1.17
SNHG17-203ENST00000417578 NFAT5O94916 1531 aa22.37■■□□□ 1.17
SNHG17-203ENST00000417578 OVOS2A0A0J9YW53 1432 aa22.37■■□□□ 1.17
SNHG17-203ENST00000417578 OVOS2Q6IE36 1432 aa22.37■■□□□ 1.17
SNHG17-203ENST00000417578 COL18A1P39060 1754 aa22.35■■□□□ 1.17
SNHG17-203ENST00000417578 FYB1O15117 783 aa22.35■■□□□ 1.17
SNHG17-203ENST00000417578 SPATA31A1Q5TZJ5 1347 aa22.34■■□□□ 1.17
SNHG17-203ENST00000417578 C11orf95C9JLR9 678 aaPredicted RBP22.34■■□□□ 1.17
SNHG17-203ENST00000417578 SEPT12Q8IYM1 358 aa22.34■■□□□ 1.17
SNHG17-203ENST00000417578 CARD14Q9BXL6 1004 aa22.34■■□□□ 1.17
SNHG17-203ENST00000417578 COL5A2P05997 1499 aaPredicted RBP22.34■■□□□ 1.17
SNHG17-203ENST00000417578 FAM98CQ17RN3 349 aaKnown RBP22.33■■□□□ 1.17
SNHG17-203ENST00000417578 LARP1Q6PKG0 1096 aaKnown RBP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms