RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 ONECUT3O60422 494 aaPredicted RBP26.47■■□□□ 1.83
VPS16-204ENST00000417508 NBPF8Q3BBV2 869 aa26.47■■□□□ 1.83
VPS16-204ENST00000417508 ACEP12821 1306 aa26.46■■□□□ 1.83
VPS16-204ENST00000417508 NEUROD1Q13562 356 aa26.46■■□□□ 1.83
VPS16-204ENST00000417508 PLCH1Q4KWH8 1693 aa26.46■■□□□ 1.83
VPS16-204ENST00000417508 GLI3P10071 1580 aa26.46■■□□□ 1.83
VPS16-204ENST00000417508 SRPK2P78362 688 aaKnown RBP26.44■■□□□ 1.82
VPS16-204ENST00000417508 CCDC9Q9Y3X0 531 aaKnown RBP26.44■■□□□ 1.82
VPS16-204ENST00000417508 BTG4Q9NY30 223 aa26.43■■□□□ 1.82
VPS16-204ENST00000417508 TOPAZ1Q8N9V7 1692 aa26.41■■□□□ 1.82
VPS16-204ENST00000417508 COL14A1Q05707 1796 aaKnown RBP26.41■■□□□ 1.82
VPS16-204ENST00000417508 SEPT12Q8IYM1 358 aa26.41■■□□□ 1.82
VPS16-204ENST00000417508 PRDM11Q9NQV5 511 aa26.39■■□□□ 1.82
VPS16-204ENST00000417508 BRD4O60885 1362 aaPredicted RBP26.38■■□□□ 1.81
VPS16-204ENST00000417508 CABP2Q9NPB3 220 aa26.38■■□□□ 1.81
VPS16-204ENST00000417508 CRYBG1Q9Y4K1 1723 aa26.37■■□□□ 1.81
VPS16-204ENST00000417508 TRPM1Q7Z4N2 1603 aa26.37■■□□□ 1.81
VPS16-204ENST00000417508 ABTB2Q8N961 1025 aa26.36■■□□□ 1.81
VPS16-204ENST00000417508 PPIP5K1Q6PFW1 1433 aa26.36■■□□□ 1.81
VPS16-204ENST00000417508 EVC2Q86UK5 1308 aa26.36■■□□□ 1.81
VPS16-204ENST00000417508 ROCK2O75116 1388 aaKnown RBP26.35■■□□□ 1.81
VPS16-204ENST00000417508 QRICH2Q9H0J4 1663 aa26.35■■□□□ 1.81
VPS16-204ENST00000417508 NRAPQ86VF7 1730 aa26.34■■□□□ 1.81
VPS16-204ENST00000417508 BRWD3Q6RI45 1802 aa26.34■■□□□ 1.81
VPS16-204ENST00000417508 KRT27Q7Z3Y8 459 aa26.33■■□□□ 1.81
VPS16-204ENST00000417508 NLRP13Q86W25 1043 aa26.33■■□□□ 1.81
VPS16-204ENST00000417508 NUTM2GQ5VZR2 741 aa26.32■■□□□ 1.8
VPS16-204ENST00000417508 CABP1Q9NZU7 370 aa26.32■■□□□ 1.8
VPS16-204ENST00000417508 SPATA31A5Q5VU36 1347 aa26.32■■□□□ 1.8
VPS16-204ENST00000417508 SPATA31A7Q8IWB4 1347 aa26.32■■□□□ 1.8
VPS16-204ENST00000417508 KIAA0232Q92628 1395 aa26.32■■□□□ 1.8
VPS16-204ENST00000417508 ZC3H6P61129 1189 aaKnown RBP26.3■■□□□ 1.8
VPS16-204ENST00000417508 BLMP54132 1417 aaPredicted RBP26.3■■□□□ 1.8
VPS16-204ENST00000417508 FAM98CQ17RN3 349 aaKnown RBP26.29■■□□□ 1.8
VPS16-204ENST00000417508 USP19O94966 1318 aa26.28■■□□□ 1.8
VPS16-204ENST00000417508 PHRF1Q9P1Y6 1649 aaKnown RBP26.28■■□□□ 1.8
VPS16-204ENST00000417508 A0A0G2JS52 829 aa26.27■■□□□ 1.8
VPS16-204ENST00000417508 MYT1Q01538 1121 aa26.27■■□□□ 1.8
VPS16-204ENST00000417508 TRIM26Q12899 539 aaPredicted RBP26.27■■□□□ 1.8
VPS16-204ENST00000417508 SF3B2Q13435 895 aaKnown RBP26.27■■□□□ 1.8
VPS16-204ENST00000417508 CHRNA2Q15822 529 aa26.27■■□□□ 1.8
VPS16-204ENST00000417508 ZNF692Q9BU19 519 aaPredicted RBP26.27■■□□□ 1.8
VPS16-204ENST00000417508 CPDO75976 1380 aa26.25■■□□□ 1.79
VPS16-204ENST00000417508 GCP02774 474 aa26.25■■□□□ 1.79
VPS16-204ENST00000417508 ZRANB1Q9UGI0 708 aa26.25■■□□□ 1.79
VPS16-204ENST00000417508 EP400Q96L91 3159 aa26.25■■□□□ 1.79
VPS16-204ENST00000417508 EVA1CP58658 441 aa26.24■■□□□ 1.79
VPS16-204ENST00000417508 USP6P35125 1406 aa26.23■■□□□ 1.79
VPS16-204ENST00000417508 SPATA31A1Q5TZJ5 1347 aa26.23■■□□□ 1.79
VPS16-204ENST00000417508 TONSLQ96HA7 1378 aa26.22■■□□□ 1.79
VPS16-204ENST00000417508 NLRP6P59044 892 aa26.21■■□□□ 1.79
VPS16-204ENST00000417508 CARD11Q9BXL7 1154 aa26.21■■□□□ 1.79
VPS16-204ENST00000417508 STRN4Q9NRL3 753 aa26.21■■□□□ 1.79
VPS16-204ENST00000417508 SBNO2Q9Y2G9 1366 aa26.2■■□□□ 1.78
VPS16-204ENST00000417508 SSH2Q76I76 1423 aa26.19■■□□□ 1.78
VPS16-204ENST00000417508 NRKQ7Z2Y5 1582 aa26.19■■□□□ 1.78
VPS16-204ENST00000417508 BARGINQ6ZT62 677 aa26.17■■□□□ 1.78
VPS16-204ENST00000417508 THSD7AQ9UPZ6 1657 aa26.15■■□□□ 1.78
VPS16-204ENST00000417508 CAMTA1Q9Y6Y1 1673 aa26.15■■□□□ 1.78
VPS16-204ENST00000417508 DEFB132Q7Z7B7 95 aa26.14■■□□□ 1.78
VPS16-204ENST00000417508 THRAP3Q9Y2W1 955 aaKnown RBP26.14■■□□□ 1.78
VPS16-204ENST00000417508 TTC21BQ7Z4L5 1316 aa26.14■■□□□ 1.77
VPS16-204ENST00000417508 TTC21AQ8NDW8 1320 aa26.14■■□□□ 1.77
VPS16-204ENST00000417508 BAG6P46379 1132 aa26.13■■□□□ 1.77
VPS16-204ENST00000417508 LMO7Q8WWI1 1683 aa26.12■■□□□ 1.77
VPS16-204ENST00000417508 LARP1Q6PKG0 1096 aaKnown RBP26.12■■□□□ 1.77
VPS16-204ENST00000417508 TCP11L2Q8N4U5 519 aa26.12■■□□□ 1.77
VPS16-204ENST00000417508 KCNH5Q8NCM2 988 aa26.12■■□□□ 1.77
VPS16-204ENST00000417508 CPSF1Q10570 1443 aaKnown RBP26.12■■□□□ 1.77
VPS16-204ENST00000417508 AATKQ6ZMQ8 1374 aa26.11■■□□□ 1.77
VPS16-204ENST00000417508 SLIT3O75094 1523 aa26.11■■□□□ 1.77
VPS16-204ENST00000417508 PUS7Q96PZ0 661 aaKnown RBP26.11■■□□□ 1.77
VPS16-204ENST00000417508 USP35Q9P2H5 1018 aa26.11■■□□□ 1.77
VPS16-204ENST00000417508 AKAP12Q02952 1782 aa26.1■■□□□ 1.77
VPS16-204ENST00000417508 SLC24A1O60721 1099 aa26.1■■□□□ 1.77
VPS16-204ENST00000417508 FAM196AQ6ZSG2 479 aa26.1■■□□□ 1.77
VPS16-204ENST00000417508 KTN1Q86UP2 1357 aaKnown RBP26.09■■□□□ 1.77
VPS16-204ENST00000417508 PIK3C2AO00443 1686 aa26.07■■□□□ 1.76
VPS16-204ENST00000417508 PDE3BQ13370 1112 aa26.07■■□□□ 1.76
VPS16-204ENST00000417508 COL5A2P05997 1499 aaPredicted RBP26.06■■□□□ 1.76
VPS16-204ENST00000417508 FAM182BQ5T319 152 aa26.06■■□□□ 1.76
VPS16-204ENST00000417508 RGPD1P0DJD0 1748 aa26.05■■□□□ 1.76
VPS16-204ENST00000417508 ZBTB7CA1YPR0 619 aa26.04■■□□□ 1.76
VPS16-204ENST00000417508 ARHGEF25Q86VW2 580 aa26.04■■□□□ 1.76
VPS16-204ENST00000417508 CRB1P82279 1406 aa26.04■■□□□ 1.76
VPS16-204ENST00000417508 C11orf95C9JLR9 678 aaPredicted RBP26.03■■□□□ 1.76
VPS16-204ENST00000417508 HDGFL2Q7Z4V5 671 aaPredicted RBP26.03■■□□□ 1.76
VPS16-204ENST00000417508 TMC1Q8TDI8 760 aa26.02■■□□□ 1.76
VPS16-204ENST00000417508 DISP2A7MBM2 1401 aa26■■□□□ 1.75
VPS16-204ENST00000417508 TERF2IPQ9NYB0 399 aa26■■□□□ 1.75
VPS16-204ENST00000417508 COL18A1P39060 1754 aa26■■□□□ 1.75
VPS16-204ENST00000417508 USP31Q70CQ4 1352 aa25.99■■□□□ 1.75
VPS16-204ENST00000417508 EN1Q05925 392 aaPredicted RBP25.99■■□□□ 1.75
VPS16-204ENST00000417508 TOM1L2Q6ZVM7 507 aa25.99■■□□□ 1.75
VPS16-204ENST00000417508 SLC12A5Q9H2X9 1139 aa25.99■■□□□ 1.75
VPS16-204ENST00000417508 AXIN2Q9Y2T1 843 aa25.99■■□□□ 1.75
VPS16-204ENST00000417508 MON2Q7Z3U7 1717 aa25.99■■□□□ 1.75
VPS16-204ENST00000417508 WDR17Q8IZU2 1322 aa25.98■■□□□ 1.75
VPS16-204ENST00000417508 ST20-MTHFSA0A0A6YYL1 179 aa25.97■■□□□ 1.75
VPS16-204ENST00000417508 TRIM37O94972 964 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms