RNA–Protein interactions for RNA: ENST00000414479.1

SMC4P1-201, Transcript of structural maintenance of chromosomes 4 pseudogene 1, humanhuman

BASIC

Gene SMC4P1, Length 527 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4P1-201ENST00000414479 ARMC2Q8NEN0 867 aa12.06□□□□□ -0.48
SMC4P1-201ENST00000414479 BLOC1S3Q6QNY0 202 aa12.05□□□□□ -0.48
SMC4P1-201ENST00000414479 NFATC2IPQ8NCF5 419 aa12.05□□□□□ -0.48
SMC4P1-201ENST00000414479 HS3ST6Q96QI5 342 aa12.05□□□□□ -0.48
SMC4P1-201ENST00000414479 GZF1Q9H116 711 aaPredicted RBP12.05□□□□□ -0.48
SMC4P1-201ENST00000414479 SCUBE3Q8IX30 993 aa12.04□□□□□ -0.48
SMC4P1-201ENST00000414479 GPKOWQ92917 476 aaPredicted RBP eCLIP12.04□□□□□ -0.48
SMC4P1-201ENST00000414479 FBXO45P0C2W1 286 aa12.03□□□□□ -0.48
SMC4P1-201ENST00000414479 CTHP32929 405 aa12.03□□□□□ -0.48
SMC4P1-201ENST00000414479 MCCD1P59942 119 aaPredicted RBP12.03□□□□□ -0.48
SMC4P1-201ENST00000414479 LHX8Q68G74 356 aa12.03□□□□□ -0.48
SMC4P1-201ENST00000414479 VRTNQ9H8Y1 702 aa12.03□□□□□ -0.48
SMC4P1-201ENST00000414479 F12P00748 615 aaPredicted RBP12.02□□□□□ -0.49
SMC4P1-201ENST00000414479 GPSM3Q9Y4H4 160 aa12.02□□□□□ -0.49
SMC4P1-201ENST00000414479 HRO43593 1189 aa12.01□□□□□ -0.49
SMC4P1-201ENST00000414479 APLP1P51693 650 aa12.01□□□□□ -0.49
SMC4P1-201ENST00000414479 NBPF14Q5TI25 921 aa12.01□□□□□ -0.49
SMC4P1-201ENST00000414479 TBC1D9Q6ZT07 1266 aa12.01□□□□□ -0.49
SMC4P1-201ENST00000414479 WNT2BQ93097 391 aa12.01□□□□□ -0.49
SMC4P1-201ENST00000414479 CCNYL3P0C7X3 344 aa12□□□□□ -0.49
SMC4P1-201ENST00000414479 PTK2Q05397 1052 aa12□□□□□ -0.49
SMC4P1-201ENST00000414479 MSS51Q4VC12 460 aa12□□□□□ -0.49
SMC4P1-201ENST00000414479 THAP11Q96EK4 314 aa11.99□□□□□ -0.49
SMC4P1-201ENST00000414479 MAP10Q9P2G4 905 aa11.99□□□□□ -0.49
SMC4P1-201ENST00000414479 BCAMP50895 628 aa11.98□□□□□ -0.49
SMC4P1-201ENST00000414479 ELOAQ14241 798 aaKnown RBP11.97□□□□□ -0.49
SMC4P1-201ENST00000414479 MFAP1P55081 439 aaKnown RBP11.96□□□□□ -0.49
SMC4P1-201ENST00000414479 SLFNL1Q499Z3 407 aa11.96□□□□□ -0.49
SMC4P1-201ENST00000414479 PDXDC2PQ6P474 469 aa11.96□□□□□ -0.49
SMC4P1-201ENST00000414479 NUDT12Q9BQG2 462 aa11.96□□□□□ -0.49
SMC4P1-201ENST00000414479 SKIP12755 728 aa11.95□□□□□ -0.5
SMC4P1-201ENST00000414479 CDCA8Q53HL2 280 aa11.95□□□□□ -0.5
SMC4P1-201ENST00000414479 PLEKHM2Q8IWE5 1019 aa11.95□□□□□ -0.5
SMC4P1-201ENST00000414479 SPSB2Q99619 263 aa11.95□□□□□ -0.5
SMC4P1-201ENST00000414479 USP17L3A6NCW0 530 aa11.94□□□□□ -0.5
SMC4P1-201ENST00000414479 USP17L4A6NCW7 530 aa11.94□□□□□ -0.5
SMC4P1-201ENST00000414479 USP17L5A8MUK1 530 aa11.94□□□□□ -0.5
SMC4P1-201ENST00000414479 LZTS3O60299 673 aaPredicted RBP11.94□□□□□ -0.5
SMC4P1-201ENST00000414479 DXOO77932 396 aaKnown RBP11.94□□□□□ -0.5
SMC4P1-201ENST00000414479 USP17L2Q6R6M4 530 aa11.94□□□□□ -0.5
SMC4P1-201ENST00000414479 ANKRD13DQ6ZTN6 518 aa11.94□□□□□ -0.5
SMC4P1-201ENST00000414479 USP17L1Q7RTZ2 530 aa11.94□□□□□ -0.5
SMC4P1-201ENST00000414479 KCNH2Q12809 1159 aa11.93□□□□□ -0.5
SMC4P1-201ENST00000414479 NYAP1Q6ZVC0 841 aa11.93□□□□□ -0.5
SMC4P1-201ENST00000414479 FAM163AQ96GL9 167 aaPredicted RBP11.93□□□□□ -0.5
SMC4P1-201ENST00000414479 EVA1BQ9NVM1 165 aa11.93□□□□□ -0.5
SMC4P1-201ENST00000414479 TMEM88BA6NKF7 163 aa11.91□□□□□ -0.5
SMC4P1-201ENST00000414479 MMP16P51512 607 aa11.91□□□□□ -0.5
SMC4P1-201ENST00000414479 PCDHB9Q9Y5E1 797 aa11.91□□□□□ -0.5
SMC4P1-201ENST00000414479 FAM196BA6NMK8 535 aa11.9□□□□□ -0.5
SMC4P1-201ENST00000414479 ATP5J2-PTCD1G3V325 749 aa11.9□□□□□ -0.5
SMC4P1-201ENST00000414479 KANK4Q5T7N3 995 aaPredicted RBP11.9□□□□□ -0.5
SMC4P1-201ENST00000414479 RNF135Q8IUD6 432 aa11.9□□□□□ -0.5
SMC4P1-201ENST00000414479 PIK3CDO00329 1044 aa11.89□□□□□ -0.51
SMC4P1-201ENST00000414479 LARP1Q6PKG0 1096 aaKnown RBP11.89□□□□□ -0.51
SMC4P1-201ENST00000414479 ARHGAP9Q9BRR9 750 aa11.89□□□□□ -0.51
SMC4P1-201ENST00000414479 NOVA2Q9UNW9 492 aaKnown RBP11.89□□□□□ -0.51
SMC4P1-201ENST00000414479 IVNS1ABPQ9Y6Y0 642 aa11.89□□□□□ -0.51
SMC4P1-201ENST00000414479 ZBTB33Q86T24 672 aa11.88□□□□□ -0.51
SMC4P1-201ENST00000414479 WBP1LQ9NX94 342 aa11.88□□□□□ -0.51
SMC4P1-201ENST00000414479 CEP126Q9P2H0 1117 aa11.88□□□□□ -0.51
SMC4P1-201ENST00000414479 MAP7D1Q3KQU3 841 aa11.87□□□□□ -0.51
SMC4P1-201ENST00000414479 POTEB3A0JP26 581 aa11.86□□□□□ -0.51
SMC4P1-201ENST00000414479 ADH1BP00325 375 aa11.86□□□□□ -0.51
SMC4P1-201ENST00000414479 COPS2P61201 443 aa11.86□□□□□ -0.51
SMC4P1-201ENST00000414479 EML3Q32P44 896 aa11.86□□□□□ -0.51
SMC4P1-201ENST00000414479 POTEBQ6S5H4 581 aa11.86□□□□□ -0.51
SMC4P1-201ENST00000414479 RGS22Q8NE09 1264 aa11.86□□□□□ -0.51
SMC4P1-201ENST00000414479 MKRN1Q9UHC7 482 aaKnown RBP11.86□□□□□ -0.51
SMC4P1-201ENST00000414479 USP17L15C9J2P7 530 aa11.85□□□□□ -0.51
SMC4P1-201ENST00000414479 USP17L10C9JJH3 530 aa11.85□□□□□ -0.51
SMC4P1-201ENST00000414479 USP17L13C9JLJ4 530 aa11.85□□□□□ -0.51
SMC4P1-201ENST00000414479 USP17L12C9JPN9 530 aa11.85□□□□□ -0.51
SMC4P1-201ENST00000414479 USP17L11C9JVI0 530 aa11.85□□□□□ -0.51
SMC4P1-201ENST00000414479 USP17L21D6R901 530 aa11.85□□□□□ -0.51
SMC4P1-201ENST00000414479 USP17L18D6R9N7 530 aa11.85□□□□□ -0.51
SMC4P1-201ENST00000414479 USP17L22D6RA61 530 aa11.85□□□□□ -0.51
SMC4P1-201ENST00000414479 USP17L17D6RBQ6 530 aa11.85□□□□□ -0.51
SMC4P1-201ENST00000414479 USP17L19D6RCP7 530 aa11.85□□□□□ -0.51
SMC4P1-201ENST00000414479 USP17L20D6RJB6 530 aa11.85□□□□□ -0.51
SMC4P1-201ENST00000414479 USP17L24Q0WX57 530 aa11.85□□□□□ -0.51
SMC4P1-201ENST00000414479 CCDC27Q2M243 656 aa11.85□□□□□ -0.51
SMC4P1-201ENST00000414479 SND1Q7KZF4 910 aaKnown RBP eCLIP11.85□□□□□ -0.51
SMC4P1-201ENST00000414479 TRIM50Q86XT4 487 aa11.85□□□□□ -0.51
SMC4P1-201ENST00000414479 FAM160A2Q8N612 972 aaPredicted RBP11.85□□□□□ -0.51
SMC4P1-201ENST00000414479 CCER1Q8TC90 406 aaPredicted RBP11.85□□□□□ -0.51
SMC4P1-201ENST00000414479 TMEM164Q5U3C3 297 aa11.84□□□□□ -0.51
SMC4P1-201ENST00000414479 PLPP7Q8NBV4 271 aa11.84□□□□□ -0.51
SMC4P1-201ENST00000414479 MTMR7Q9Y216 660 aa11.84□□□□□ -0.51
SMC4P1-201ENST00000414479 GNEQ9Y223 722 aaKnown RBP11.84□□□□□ -0.51
SMC4P1-201ENST00000414479 CARNS1A5YM72 827 aa11.83□□□□□ -0.52
SMC4P1-201ENST00000414479 RASA1P20936 1047 aa11.83□□□□□ -0.52
SMC4P1-201ENST00000414479 ATP1A2P50993 1020 aa11.83□□□□□ -0.52
SMC4P1-201ENST00000414479 NCOA4Q13772 614 aa11.83□□□□□ -0.52
SMC4P1-201ENST00000414479 THSD4Q6ZMP0 1018 aa11.83□□□□□ -0.52
SMC4P1-201ENST00000414479 DZIP3Q86Y13 1208 aaKnown RBP11.83□□□□□ -0.52
SMC4P1-201ENST00000414479 FAM174AQ8TBP5 190 aa11.83□□□□□ -0.52
SMC4P1-201ENST00000414479 ADAM32Q8TC27 787 aa11.83□□□□□ -0.52
SMC4P1-201ENST00000414479 ZMIZ1Q9ULJ6 1067 aa11.83□□□□□ -0.52
SMC4P1-201ENST00000414479 ZPR1O75312 459 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms