RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 SRPK2P78362 688 aaKnown RBP24■■□□□ 1.43
SCAMP4-204ENST00000414057 PLEKHG3A1L390 1219 aa24■■□□□ 1.43
SCAMP4-204ENST00000414057 RALGAPBQ86X10 1494 aa23.99■■□□□ 1.43
SCAMP4-204ENST00000414057 FAM83GA6ND36 823 aa23.99■■□□□ 1.43
SCAMP4-204ENST00000414057 CCDC9Q9Y3X0 531 aaKnown RBP23.99■■□□□ 1.43
SCAMP4-204ENST00000414057 POLR3AO14802 1390 aaPredicted RBP23.98■■□□□ 1.43
SCAMP4-204ENST00000414057 ACEP12821 1306 aa23.98■■□□□ 1.43
SCAMP4-204ENST00000414057 ALS2Q96Q42 1657 aa23.98■■□□□ 1.43
SCAMP4-204ENST00000414057 NBPF8Q3BBV2 869 aa23.97■■□□□ 1.43
SCAMP4-204ENST00000414057 ABCA3Q99758 1704 aa23.96■■□□□ 1.43
SCAMP4-204ENST00000414057 NWD2Q9ULI1 1742 aa23.96■■□□□ 1.43
SCAMP4-204ENST00000414057 ROCK2O75116 1388 aaKnown RBP23.95■■□□□ 1.42
SCAMP4-204ENST00000414057 CCDC125Q86Z20 511 aa23.94■■□□□ 1.42
SCAMP4-204ENST00000414057 BTG4Q9NY30 223 aa23.94■■□□□ 1.42
SCAMP4-204ENST00000414057 PRDM11Q9NQV5 511 aa23.93■■□□□ 1.42
SCAMP4-204ENST00000414057 GLI3P10071 1580 aa23.92■■□□□ 1.42
SCAMP4-204ENST00000414057 PLCH1Q4KWH8 1693 aa23.92■■□□□ 1.42
SCAMP4-204ENST00000414057 CABP2Q9NPB3 220 aa23.92■■□□□ 1.42
SCAMP4-204ENST00000414057 PPIP5K1Q6PFW1 1433 aa23.91■■□□□ 1.42
SCAMP4-204ENST00000414057 EVC2Q86UK5 1308 aa23.91■■□□□ 1.42
SCAMP4-204ENST00000414057 SEPT12Q8IYM1 358 aa23.91■■□□□ 1.42
SCAMP4-204ENST00000414057 TOPAZ1Q8N9V7 1692 aa23.9■■□□□ 1.42
SCAMP4-204ENST00000414057 BRD4O60885 1362 aaPredicted RBP23.9■■□□□ 1.42
SCAMP4-204ENST00000414057 ONECUT3O60422 494 aaPredicted RBP23.9■■□□□ 1.42
SCAMP4-204ENST00000414057 ABTB2Q8N961 1025 aa23.9■■□□□ 1.42
SCAMP4-204ENST00000414057 COL14A1Q05707 1796 aaKnown RBP23.9■■□□□ 1.42
SCAMP4-204ENST00000414057 TRPM1Q7Z4N2 1603 aa23.89■■□□□ 1.42
SCAMP4-204ENST00000414057 QRICH2Q9H0J4 1663 aa23.88■■□□□ 1.41
SCAMP4-204ENST00000414057 NLRP13Q86W25 1043 aa23.87■■□□□ 1.41
SCAMP4-204ENST00000414057 A0A0G2JS52 829 aa23.86■■□□□ 1.41
SCAMP4-204ENST00000414057 MYT1Q01538 1121 aa23.86■■□□□ 1.41
SCAMP4-204ENST00000414057 NUTM2GQ5VZR2 741 aa23.86■■□□□ 1.41
SCAMP4-204ENST00000414057 CABP1Q9NZU7 370 aa23.86■■□□□ 1.41
SCAMP4-204ENST00000414057 KIAA0232Q92628 1395 aa23.85■■□□□ 1.41
SCAMP4-204ENST00000414057 KRT27Q7Z3Y8 459 aa23.84■■□□□ 1.41
SCAMP4-204ENST00000414057 CRYBG1Q9Y4K1 1723 aa23.83■■□□□ 1.41
SCAMP4-204ENST00000414057 ZC3H6P61129 1189 aaKnown RBP23.82■■□□□ 1.4
SCAMP4-204ENST00000414057 SF3B2Q13435 895 aaKnown RBP23.81■■□□□ 1.4
SCAMP4-204ENST00000414057 FAM98CQ17RN3 349 aaKnown RBP23.81■■□□□ 1.4
SCAMP4-204ENST00000414057 CARD11Q9BXL7 1154 aa23.81■■□□□ 1.4
SCAMP4-204ENST00000414057 SPATA31A5Q5VU36 1347 aa23.81■■□□□ 1.4
SCAMP4-204ENST00000414057 SPATA31A7Q8IWB4 1347 aa23.81■■□□□ 1.4
SCAMP4-204ENST00000414057 NRAPQ86VF7 1730 aa23.81■■□□□ 1.4
SCAMP4-204ENST00000414057 ZNF692Q9BU19 519 aaPredicted RBP23.81■■□□□ 1.4
SCAMP4-204ENST00000414057 BLMP54132 1417 aaPredicted RBP23.8■■□□□ 1.4
SCAMP4-204ENST00000414057 USP19O94966 1318 aa23.8■■□□□ 1.4
SCAMP4-204ENST00000414057 CHRNA2Q15822 529 aa23.8■■□□□ 1.4
SCAMP4-204ENST00000414057 PHRF1Q9P1Y6 1649 aaKnown RBP23.79■■□□□ 1.4
SCAMP4-204ENST00000414057 USP6P35125 1406 aa23.79■■□□□ 1.4
SCAMP4-204ENST00000414057 EVA1CP58658 441 aa23.79■■□□□ 1.4
SCAMP4-204ENST00000414057 CPDO75976 1380 aa23.78■■□□□ 1.4
SCAMP4-204ENST00000414057 STRN4Q9NRL3 753 aa23.78■■□□□ 1.4
SCAMP4-204ENST00000414057 GCP02774 474 aa23.77■■□□□ 1.4
SCAMP4-204ENST00000414057 SBNO2Q9Y2G9 1366 aa23.77■■□□□ 1.4
SCAMP4-204ENST00000414057 NLRP6P59044 892 aa23.75■■□□□ 1.39
SCAMP4-204ENST00000414057 SPATA31A1Q5TZJ5 1347 aa23.75■■□□□ 1.39
SCAMP4-204ENST00000414057 EP400Q96L91 3159 aa23.75■■□□□ 1.39
SCAMP4-204ENST00000414057 ZRANB1Q9UGI0 708 aa23.75■■□□□ 1.39
SCAMP4-204ENST00000414057 NRKQ7Z2Y5 1582 aa23.74■■□□□ 1.39
SCAMP4-204ENST00000414057 BRWD3Q6RI45 1802 aa23.73■■□□□ 1.39
SCAMP4-204ENST00000414057 SSH2Q76I76 1423 aa23.71■■□□□ 1.39
SCAMP4-204ENST00000414057 TTC21AQ8NDW8 1320 aa23.7■■□□□ 1.38
SCAMP4-204ENST00000414057 SLC24A1O60721 1099 aa23.69■■□□□ 1.38
SCAMP4-204ENST00000414057 TTC21BQ7Z4L5 1316 aa23.69■■□□□ 1.38
SCAMP4-204ENST00000414057 ZNF316A6NFI3 1004 aaPredicted RBP23.68■■□□□ 1.38
SCAMP4-204ENST00000414057 BARGINQ6ZT62 677 aa23.68■■□□□ 1.38
SCAMP4-204ENST00000414057 USP35Q9P2H5 1018 aa23.68■■□□□ 1.38
SCAMP4-204ENST00000414057 KCNH5Q8NCM2 988 aa23.68■■□□□ 1.38
SCAMP4-204ENST00000414057 CAMTA1Q9Y6Y1 1673 aa23.67■■□□□ 1.38
SCAMP4-204ENST00000414057 THRAP3Q9Y2W1 955 aaKnown RBP23.67■■□□□ 1.38
SCAMP4-204ENST00000414057 KTN1Q86UP2 1357 aaKnown RBP23.66■■□□□ 1.38
SCAMP4-204ENST00000414057 ZBTB7CA1YPR0 619 aa23.66■■□□□ 1.38
SCAMP4-204ENST00000414057 BAG6P46379 1132 aa23.66■■□□□ 1.38
SCAMP4-204ENST00000414057 CPSF1Q10570 1443 aaKnown RBP23.66■■□□□ 1.38
SCAMP4-204ENST00000414057 LARP1Q6PKG0 1096 aaKnown RBP23.66■■□□□ 1.38
SCAMP4-204ENST00000414057 TCP11L2Q8N4U5 519 aa23.66■■□□□ 1.38
SCAMP4-204ENST00000414057 DEFB132Q7Z7B7 95 aa23.65■■□□□ 1.38
SCAMP4-204ENST00000414057 PUS7Q96PZ0 661 aaKnown RBP23.65■■□□□ 1.38
SCAMP4-204ENST00000414057 THSD7AQ9UPZ6 1657 aa23.65■■□□□ 1.38
SCAMP4-204ENST00000414057 SLIT3O75094 1523 aa23.65■■□□□ 1.38
SCAMP4-204ENST00000414057 AATKQ6ZMQ8 1374 aa23.65■■□□□ 1.38
SCAMP4-204ENST00000414057 LMO7Q8WWI1 1683 aa23.63■■□□□ 1.37
SCAMP4-204ENST00000414057 PDE3BQ13370 1112 aa23.63■■□□□ 1.37
SCAMP4-204ENST00000414057 TMC1Q8TDI8 760 aa23.63■■□□□ 1.37
SCAMP4-204ENST00000414057 FAM196AQ6ZSG2 479 aa23.62■■□□□ 1.37
SCAMP4-204ENST00000414057 HDGFL2Q7Z4V5 671 aaPredicted RBP23.62■■□□□ 1.37
SCAMP4-204ENST00000414057 COL5A2P05997 1499 aaPredicted RBP23.62■■□□□ 1.37
SCAMP4-204ENST00000414057 PIK3C2AO00443 1686 aa23.6■■□□□ 1.37
SCAMP4-204ENST00000414057 FAM182BQ5T319 152 aa23.6■■□□□ 1.37
SCAMP4-204ENST00000414057 TERF2IPQ9NYB0 399 aa23.6■■□□□ 1.37
SCAMP4-204ENST00000414057 CRB1P82279 1406 aa23.6■■□□□ 1.37
SCAMP4-204ENST00000414057 AKAP12Q02952 1782 aa23.59■■□□□ 1.37
SCAMP4-204ENST00000414057 ARHGEF25Q86VW2 580 aa23.58■■□□□ 1.37
SCAMP4-204ENST00000414057 C11orf95C9JLR9 678 aaPredicted RBP23.57■■□□□ 1.36
SCAMP4-204ENST00000414057 TOM1L2Q6ZVM7 507 aa23.57■■□□□ 1.36
SCAMP4-204ENST00000414057 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.57■■□□□ 1.36
SCAMP4-204ENST00000414057 ST20-MTHFSA0A0A6YYL1 179 aa23.56■■□□□ 1.36
SCAMP4-204ENST00000414057 SLC12A5Q9H2X9 1139 aa23.56■■□□□ 1.36
SCAMP4-204ENST00000414057 SOX12O15370 315 aa23.56■■□□□ 1.36
SCAMP4-204ENST00000414057 NINLQ9Y2I6 1382 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms