RNA–Protein interactions for RNA: ENST00000413985.1

CRIM1-202, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-202ENST00000413985 NBPF8Q3BBV2 869 aa16.76■□□□□ 0.27
CRIM1-202ENST00000413985 NBPF14Q5TI25 921 aa16.76■□□□□ 0.27
CRIM1-202ENST00000413985 TRPM3Q9HCF6 1732 aaPredicted RBP16.76■□□□□ 0.27
CRIM1-202ENST00000413985 RPGRIP1LQ68CZ1 1315 aa16.74■□□□□ 0.27
CRIM1-202ENST00000413985 PMFBP1Q8TBY8 1022 aa16.74■□□□□ 0.27
CRIM1-202ENST00000413985 SPATA31A1Q5TZJ5 1347 aa16.73■□□□□ 0.27
CRIM1-202ENST00000413985 RRBP1Q9P2E9 1410 aaKnown RBP16.73■□□□□ 0.27
CRIM1-202ENST00000413985 MYOM1P52179 1685 aa16.73■□□□□ 0.27
CRIM1-202ENST00000413985 ALS2Q96Q42 1657 aa16.73■□□□□ 0.27
CRIM1-202ENST00000413985 ABCC11Q96J66 1382 aa16.73■□□□□ 0.27
CRIM1-202ENST00000413985 CRYBG1Q9Y4K1 1723 aa16.73■□□□□ 0.27
CRIM1-202ENST00000413985 PDGFDQ9GZP0 370 aaPredicted RBP16.72■□□□□ 0.27
CRIM1-202ENST00000413985 CASZ1Q86V15 1759 aa16.72■□□□□ 0.27
CRIM1-202ENST00000413985 ANO8Q9HCE9 1232 aaPredicted RBP16.7■□□□□ 0.26
CRIM1-202ENST00000413985 STRN4Q9NRL3 753 aa16.69■□□□□ 0.26
CRIM1-202ENST00000413985 USP35Q9P2H5 1018 aa16.69■□□□□ 0.26
CRIM1-202ENST00000413985 YTHDC2Q9H6S0 1430 aaKnown RBP16.69■□□□□ 0.26
CRIM1-202ENST00000413985 CHRNA2Q15822 529 aa16.68■□□□□ 0.26
CRIM1-202ENST00000413985 PRDM11Q9NQV5 511 aa16.68■□□□□ 0.26
CRIM1-202ENST00000413985 ZBTB7AO95365 584 aa16.67■□□□□ 0.26
CRIM1-202ENST00000413985 SAFB2Q14151 953 aaKnown RBP eCLIP16.67■□□□□ 0.26
CRIM1-202ENST00000413985 CHD4Q14839 1912 aa16.66■□□□□ 0.26
CRIM1-202ENST00000413985 PTGER2P43116 358 aa16.65■□□□□ 0.26
CRIM1-202ENST00000413985 PDE3BQ13370 1112 aa16.65■□□□□ 0.26
CRIM1-202ENST00000413985 KIAA0232Q92628 1395 aa16.64■□□□□ 0.26
CRIM1-202ENST00000413985 RGL3Q3MIN7 710 aa16.63■□□□□ 0.25
CRIM1-202ENST00000413985 FHDC1Q9C0D6 1143 aaPredicted RBP16.63■□□□□ 0.25
CRIM1-202ENST00000413985 ATF5Q9Y2D1 282 aaPredicted RBP16.63■□□□□ 0.25
CRIM1-202ENST00000413985 PIK3C2GO75747 1445 aa16.62■□□□□ 0.25
CRIM1-202ENST00000413985 SYT17Q9BSW7 474 aa16.62■□□□□ 0.25
CRIM1-202ENST00000413985 ACIN1Q9UKV3 1341 aaKnown RBP16.61■□□□□ 0.25
CRIM1-202ENST00000413985 PHRF1Q9P1Y6 1649 aaKnown RBP16.6■□□□□ 0.25
CRIM1-202ENST00000413985 BARGINQ6ZT62 677 aa16.6■□□□□ 0.25
CRIM1-202ENST00000413985 PRAM1Q96QH2 718 aa16.6■□□□□ 0.25
CRIM1-202ENST00000413985 SSH2Q76I76 1423 aa16.6■□□□□ 0.25
CRIM1-202ENST00000413985 ANKARQ7Z5J8 1434 aa16.6■□□□□ 0.25
CRIM1-202ENST00000413985 CEP350Q5VT06 3117 aa16.59■□□□□ 0.25
CRIM1-202ENST00000413985 ZC3H6P61129 1189 aaKnown RBP16.59■□□□□ 0.25
CRIM1-202ENST00000413985 PTF1AQ7RTS3 328 aa16.59■□□□□ 0.25
CRIM1-202ENST00000413985 SIRT1Q96EB6 747 aa16.59■□□□□ 0.25
CRIM1-202ENST00000413985 PRR36Q9H6K5 1346 aa16.59■□□□□ 0.25
CRIM1-202ENST00000413985 GPRASP1Q5JY77 1395 aa16.59■□□□□ 0.25
CRIM1-202ENST00000413985 RGPD3A6NKT7 1758 aaPredicted RBP16.59■□□□□ 0.25
CRIM1-202ENST00000413985 RGPD4Q7Z3J3 1758 aa16.59■□□□□ 0.25
CRIM1-202ENST00000413985 GIGYF1O75420 1035 aaPredicted RBP16.58■□□□□ 0.24
CRIM1-202ENST00000413985 PAK3O75914 559 aaPredicted RBP16.58■□□□□ 0.24
CRIM1-202ENST00000413985 LARP1Q6PKG0 1096 aaKnown RBP16.58■□□□□ 0.24
CRIM1-202ENST00000413985 PEAK1Q9H792 1746 aa16.57■□□□□ 0.24
CRIM1-202ENST00000413985 SPATA31E1Q6ZUB1 1445 aa16.57■□□□□ 0.24
CRIM1-202ENST00000413985 HIRIP3Q9BW71 556 aaPredicted RBP16.56■□□□□ 0.24
CRIM1-202ENST00000413985 SBF2Q86WG5 1849 aa16.56■□□□□ 0.24
CRIM1-202ENST00000413985 ANKRD30BQ9BXX2 1392 aa16.55■□□□□ 0.24
CRIM1-202ENST00000413985 NUTM2GQ5VZR2 741 aa16.55■□□□□ 0.24
CRIM1-202ENST00000413985 PROM2Q8N271 834 aa16.55■□□□□ 0.24
CRIM1-202ENST00000413985 PARP4Q9UKK3 1724 aaKnown RBP16.55■□□□□ 0.24
CRIM1-202ENST00000413985 DLC1Q96QB1 1528 aa16.55■□□□□ 0.24
CRIM1-202ENST00000413985 EVA1CP58658 441 aa16.54■□□□□ 0.24
CRIM1-202ENST00000413985 TCP11L2Q8N4U5 519 aa16.54■□□□□ 0.24
CRIM1-202ENST00000413985 SLC4A1APQ9BWU0 796 aaKnown RBP16.54■□□□□ 0.24
CRIM1-202ENST00000413985 BCL11BQ9C0K0 894 aaPredicted RBP16.54■□□□□ 0.24
CRIM1-202ENST00000413985 PLSCR1O15162 318 aa16.53■□□□□ 0.24
CRIM1-202ENST00000413985 CFAP70Q5T0N1 1121 aa16.53■□□□□ 0.24
CRIM1-202ENST00000413985 SGIP1Q9BQI5 828 aa16.53■□□□□ 0.24
CRIM1-202ENST00000413985 SHANK3Q9BYB0 1731 aa16.53■□□□□ 0.24
CRIM1-202ENST00000413985 C14orf93Q9H972 538 aaKnown RBP16.52■□□□□ 0.24
CRIM1-202ENST00000413985 LMO7Q8WWI1 1683 aa16.52■□□□□ 0.23
CRIM1-202ENST00000413985 TULP4Q9NRJ4 1543 aa16.51■□□□□ 0.23
CRIM1-202ENST00000413985 NGDNQ8NEJ9 315 aaKnown RBP16.51■□□□□ 0.23
CRIM1-202ENST00000413985 OVOS2A0A0G2JMS6 1433 aa16.51■□□□□ 0.23
CRIM1-202ENST00000413985 OVOS2A0A0J9YW53 1432 aa16.51■□□□□ 0.23
CRIM1-202ENST00000413985 OVOS2Q6IE36 1432 aa16.51■□□□□ 0.23
CRIM1-202ENST00000413985 DHX57Q6P158 1386 aaKnown RBP16.51■□□□□ 0.23
CRIM1-202ENST00000413985 POGKQ9P215 609 aa16.5■□□□□ 0.23
CRIM1-202ENST00000413985 MINK1Q8N4C8 1332 aaPredicted RBP16.49■□□□□ 0.23
CRIM1-202ENST00000413985 LRRC37A3O60309 1634 aa16.49■□□□□ 0.23
CRIM1-202ENST00000413985 PPARGC1BQ86YN6 1023 aaKnown RBP16.49■□□□□ 0.23
CRIM1-202ENST00000413985 GPR162Q16538 588 aa16.47■□□□□ 0.23
CRIM1-202ENST00000413985 MTFR1LQ9H019 292 aa16.47■□□□□ 0.23
CRIM1-202ENST00000413985 ATP7BP35670 1465 aa16.47■□□□□ 0.23
CRIM1-202ENST00000413985 SLC15A2Q16348 729 aa16.46■□□□□ 0.23
CRIM1-202ENST00000413985 ARXQ96QS3 562 aa16.46■□□□□ 0.23
CRIM1-202ENST00000413985 STK32BQ9NY57 414 aa16.46■□□□□ 0.23
CRIM1-202ENST00000413985 THRAP3Q9Y2W1 955 aaKnown RBP16.46■□□□□ 0.23
CRIM1-202ENST00000413985 COL5A2P05997 1499 aaPredicted RBP16.45■□□□□ 0.22
CRIM1-202ENST00000413985 TXNRD1Q16881 649 aa16.44■□□□□ 0.22
CRIM1-202ENST00000413985 MAP3K5Q99683 1374 aa16.43■□□□□ 0.22
CRIM1-202ENST00000413985 WASLO00401 505 aaPredicted RBP16.43■□□□□ 0.22
CRIM1-202ENST00000413985 TRAK1Q9UPV9 953 aa16.43■□□□□ 0.22
CRIM1-202ENST00000413985 GOLGB1Q14789 3259 aaKnown RBP16.43■□□□□ 0.22
CRIM1-202ENST00000413985 PELP1Q8IZL8 1130 aaKnown RBP16.42■□□□□ 0.22
CRIM1-202ENST00000413985 ADGRB1O14514 1584 aa16.42■□□□□ 0.22
CRIM1-202ENST00000413985 CPDO75976 1380 aa16.41■□□□□ 0.22
CRIM1-202ENST00000413985 EIF3AQ14152 1382 aaKnown RBP16.41■□□□□ 0.22
CRIM1-202ENST00000413985 C11orf95C9JLR9 678 aaPredicted RBP16.41■□□□□ 0.22
CRIM1-202ENST00000413985 DDB1Q16531 1140 aa16.41■□□□□ 0.22
CRIM1-202ENST00000413985 MARCH10Q8NA82 808 aaPredicted RBP16.41■□□□□ 0.22
CRIM1-202ENST00000413985 CRB1P82279 1406 aa16.4■□□□□ 0.22
CRIM1-202ENST00000413985 KLHL34Q8N239 644 aa16.4■□□□□ 0.22
CRIM1-202ENST00000413985 ITSN1Q15811 1721 aa16.39■□□□□ 0.21
CRIM1-202ENST00000413985 WNK3Q9BYP7 1800 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms