RNA–Protein interactions for RNA: ENST00000410940.1

RNU4-78P-201, Transcript of RNA, U4 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU4-78P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-78P-201ENST00000410940 GDPD2Q9HCC8 539 aa6.18□□□□□ -1.42
RNU4-78P-201ENST00000410940 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.17□□□□□ -1.42
RNU4-78P-201ENST00000410940 ADH1BP00325 375 aa6.17□□□□□ -1.42
RNU4-78P-201ENST00000410940 SNRPBP14678 240 aaKnown RBP6.17□□□□□ -1.42
RNU4-78P-201ENST00000410940 LORP23490 312 aaPredicted RBP6.17□□□□□ -1.42
RNU4-78P-201ENST00000410940 CYP4X1Q8N118 509 aa6.17□□□□□ -1.42
RNU4-78P-201ENST00000410940 MTMR14Q8NCE2 650 aa6.17□□□□□ -1.42
RNU4-78P-201ENST00000410940 CDHR5Q9HBB8 845 aa6.17□□□□□ -1.42
RNU4-78P-201ENST00000410940 ADGRG1Q9Y653 693 aa6.17□□□□□ -1.42
RNU4-78P-201ENST00000410940 PRPF38BQ5VTL8 546 aaKnown RBP6.16□□□□□ -1.42
RNU4-78P-201ENST00000410940 B4GALNT3Q6L9W6 998 aa6.16□□□□□ -1.42
RNU4-78P-201ENST00000410940 ZSCAN1Q8NBB4 408 aa6.16□□□□□ -1.42
RNU4-78P-201ENST00000410940 TTC13Q8NBP0 860 aa6.16□□□□□ -1.42
RNU4-78P-201ENST00000410940 SLC6A16Q9GZN6 736 aa6.16□□□□□ -1.42
RNU4-78P-201ENST00000410940 RBM25P49756 843 aaKnown RBP6.15□□□□□ -1.42
RNU4-78P-201ENST00000410940 NUTM1Q86Y26 1132 aa6.15□□□□□ -1.42
RNU4-78P-201ENST00000410940 TRIM47Q96LD4 638 aa6.15□□□□□ -1.42
RNU4-78P-201ENST00000410940 ATP13A2Q9NQ11 1180 aa6.15□□□□□ -1.42
RNU4-78P-201ENST00000410940 ACTN4O43707 911 aaKnown RBP6.14□□□□□ -1.43
RNU4-78P-201ENST00000410940 HMGB1P09429 215 aaKnown RBP6.14□□□□□ -1.43
RNU4-78P-201ENST00000410940 SOX11P35716 441 aa6.14□□□□□ -1.43
RNU4-78P-201ENST00000410940 ABL2P42684 1182 aa6.14□□□□□ -1.43
RNU4-78P-201ENST00000410940 CCDC27Q2M243 656 aa6.14□□□□□ -1.43
RNU4-78P-201ENST00000410940 PADI6Q6TGC4 694 aa6.14□□□□□ -1.43
RNU4-78P-201ENST00000410940 SPIRE2Q8WWL2 714 aa6.14□□□□□ -1.43
RNU4-78P-201ENST00000410940 EYA1Q99502 592 aa6.14□□□□□ -1.43
RNU4-78P-201ENST00000410940 NDUFB9Q9Y6M9 179 aa6.14□□□□□ -1.43
RNU4-78P-201ENST00000410940 RPIAP49247 311 aa6.13□□□□□ -1.43
RNU4-78P-201ENST00000410940 RSBN1LQ6PCB5 846 aaPredicted RBP6.13□□□□□ -1.43
RNU4-78P-201ENST00000410940 SENP2Q9HC62 589 aa6.13□□□□□ -1.43
RNU4-78P-201ENST00000410940 LILRB3O75022 631 aa6.12□□□□□ -1.43
RNU4-78P-201ENST00000410940 SLC16A10Q8TF71 515 aa6.12□□□□□ -1.43
RNU4-78P-201ENST00000410940 LIMD1Q9UGP4 676 aa6.12□□□□□ -1.43
RNU4-78P-201ENST00000410940 CD2BP2O95400 341 aaKnown RBP6.11□□□□□ -1.43
RNU4-78P-201ENST00000410940 CD46P15529 392 aa6.11□□□□□ -1.43
RNU4-78P-201ENST00000410940 ERCC3P19447 782 aa6.11□□□□□ -1.43
RNU4-78P-201ENST00000410940 GMPRP36959 345 aa6.11□□□□□ -1.43
RNU4-78P-201ENST00000410940 USP46P62068 366 aa6.11□□□□□ -1.43
RNU4-78P-201ENST00000410940 KMT5BQ4FZB7 885 aa6.11□□□□□ -1.43
RNU4-78P-201ENST00000410940 RSPH4AQ5TD94 716 aa6.11□□□□□ -1.43
RNU4-78P-201ENST00000410940 HDGFL1Q5TGJ6 251 aa6.11□□□□□ -1.43
RNU4-78P-201ENST00000410940 TTC24A2A3L6 582 aaPredicted RBP6.1□□□□□ -1.43
RNU4-78P-201ENST00000410940 NR1I2O75469 434 aa6.1□□□□□ -1.43
RNU4-78P-201ENST00000410940 AP1G2O75843 785 aa6.1□□□□□ -1.43
RNU4-78P-201ENST00000410940 SND1Q7KZF4 910 aaKnown RBP eCLIP6.1□□□□□ -1.43
RNU4-78P-201ENST00000410940 NUTM2BA6NNL0 878 aaPredicted RBP6.09□□□□□ -1.43
RNU4-78P-201ENST00000410940 NUTM2EB1AL46 878 aaPredicted RBP6.09□□□□□ -1.43
RNU4-78P-201ENST00000410940 SRPK2P78362 688 aaKnown RBP6.09□□□□□ -1.43
RNU4-78P-201ENST00000410940 NUTM2DQ5VT03 806 aaPredicted RBP6.09□□□□□ -1.43
RNU4-78P-201ENST00000410940 FOXD4L5Q5VV16 416 aaPredicted RBP6.09□□□□□ -1.43
RNU4-78P-201ENST00000410940 NUTM2AQ8IVF1 878 aaPredicted RBP6.09□□□□□ -1.43
RNU4-78P-201ENST00000410940 PNMA1Q8ND90 353 aa6.09□□□□□ -1.43
RNU4-78P-201ENST00000410940 FOXD4L4Q8WXT5 416 aaPredicted RBP6.09□□□□□ -1.43
RNU4-78P-201ENST00000410940 PPP1R12CQ9BZL4 782 aa6.09□□□□□ -1.43
RNU4-78P-201ENST00000410940 VRTNQ9H8Y1 702 aa6.09□□□□□ -1.43
RNU4-78P-201ENST00000410940 TBC1D2BQ9UPU7 963 aa6.09□□□□□ -1.43
RNU4-78P-201ENST00000410940 ATG7O95352 703 aa6.08□□□□□ -1.44
RNU4-78P-201ENST00000410940 USP17L8P0C7I0 530 aa6.08□□□□□ -1.44
RNU4-78P-201ENST00000410940 SMPD1P17405 629 aa6.08□□□□□ -1.44
RNU4-78P-201ENST00000410940 SCUBE3Q8IX30 993 aa6.08□□□□□ -1.44
RNU4-78P-201ENST00000410940 KIFC2Q96AC6 838 aa6.08□□□□□ -1.44
RNU4-78P-201ENST00000410940 ZBTB3Q9H5J0 574 aa6.08□□□□□ -1.44
RNU4-78P-201ENST00000410940 NXF1Q9UBU9 619 aaKnown RBP6.08□□□□□ -1.44
RNU4-78P-201ENST00000410940 GNEQ9Y223 722 aaKnown RBP6.08□□□□□ -1.44
RNU4-78P-201ENST00000410940 POM121CA8CG34 1229 aa6.07□□□□□ -1.44
RNU4-78P-201ENST00000410940 CFHP08603 1231 aa6.07□□□□□ -1.44
RNU4-78P-201ENST00000410940 CFAP70Q5T0N1 1121 aa6.07□□□□□ -1.44
RNU4-78P-201ENST00000410940 IRF7Q92985 503 aa6.07□□□□□ -1.44
RNU4-78P-201ENST00000410940 SPSB2Q99619 263 aa6.07□□□□□ -1.44
RNU4-78P-201ENST00000410940 RCCD1A6NED2 376 aa6.06□□□□□ -1.44
RNU4-78P-201ENST00000410940 DNAJB2P25686 324 aa6.06□□□□□ -1.44
RNU4-78P-201ENST00000410940 MOXD2PA6NHM9 499 aa6.05□□□□□ -1.44
RNU4-78P-201ENST00000410940 FAM161AQ3B820 660 aa6.05□□□□□ -1.44
RNU4-78P-201ENST00000410940 HELBQ8NG08 1087 aaPredicted RBP6.05□□□□□ -1.44
RNU4-78P-201ENST00000410940 CCER1Q8TC90 406 aaPredicted RBP6.05□□□□□ -1.44
RNU4-78P-201ENST00000410940 ALG2Q9H553 416 aa6.05□□□□□ -1.44
RNU4-78P-201ENST00000410940 FCF1Q9Y324 198 aaKnown RBP6.05□□□□□ -1.44
RNU4-78P-201ENST00000410940 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.04□□□□□ -1.44
RNU4-78P-201ENST00000410940 PALM3A6NDB9 673 aaPredicted RBP6.04□□□□□ -1.44
RNU4-78P-201ENST00000410940 KDM4AO75164 1064 aa6.04□□□□□ -1.44
RNU4-78P-201ENST00000410940 RFX1P22670 979 aa6.04□□□□□ -1.44
RNU4-78P-201ENST00000410940 GJD4Q96KN9 370 aaPredicted RBP6.04□□□□□ -1.44
RNU4-78P-201ENST00000410940 TMEM134Q9H6X4 195 aa6.04□□□□□ -1.44
RNU4-78P-201ENST00000410940 IVNS1ABPQ9Y6Y0 642 aa6.04□□□□□ -1.44
RNU4-78P-201ENST00000410940 ELOAQ14241 798 aaKnown RBP6.03□□□□□ -1.44
RNU4-78P-201ENST00000410940 QPCTQ16769 361 aa6.03□□□□□ -1.44
RNU4-78P-201ENST00000410940 RTL5Q5HYW3 569 aaPredicted RBP6.03□□□□□ -1.44
RNU4-78P-201ENST00000410940 FBXO31Q5XUX0 539 aaPredicted RBP6.03□□□□□ -1.44
RNU4-78P-201ENST00000410940 NPAS3Q8IXF0 933 aa6.03□□□□□ -1.44
RNU4-78P-201ENST00000410940 SNIP1Q8TAD8 396 aaKnown RBP6.03□□□□□ -1.44
RNU4-78P-201ENST00000410940 NLRP7Q8WX94 980 aa6.03□□□□□ -1.44
RNU4-78P-201ENST00000410940 RBM47A0AV96 593 aaKnown RBP6.02□□□□□ -1.45
RNU4-78P-201ENST00000410940 DDX11L8A8MPP1 907 aa6.02□□□□□ -1.45
RNU4-78P-201ENST00000410940 J3QL48 77 aa6.02□□□□□ -1.45
RNU4-78P-201ENST00000410940 SLC10A3P09131 477 aa6.02□□□□□ -1.45
RNU4-78P-201ENST00000410940 LMOD1P29536 600 aaPredicted RBP6.02□□□□□ -1.45
RNU4-78P-201ENST00000410940 EIF4G2P78344 907 aaKnown RBP eCLIP6.02□□□□□ -1.45
RNU4-78P-201ENST00000410940 SEMA3FQ13275 785 aa6.02□□□□□ -1.45
RNU4-78P-201ENST00000410940 CSPP1Q1MSJ5 1256 aa6.02□□□□□ -1.45
RNU4-78P-201ENST00000410940 GRIPAP1Q4V328 841 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms