RNA–Protein interactions for RNA: ENST00000409286.5

LIMS2-204, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-204ENST00000409286 TCP11L2Q8N4U5 519 aa25.39■■□□□ 1.65
LIMS2-204ENST00000409286 PHF23Q9BUL5 403 aaPredicted RBP25.39■■□□□ 1.65
LIMS2-204ENST00000409286 AMOTL2Q9Y2J4 779 aa25.38■■□□□ 1.65
LIMS2-204ENST00000409286 CCDC136Q96JN2 1154 aa25.37■■□□□ 1.65
LIMS2-204ENST00000409286 PTCH1Q13635 1447 aa25.36■■□□□ 1.65
LIMS2-204ENST00000409286 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.36■■□□□ 1.65
LIMS2-204ENST00000409286 PRR36Q9H6K5 1346 aa25.36■■□□□ 1.65
LIMS2-204ENST00000409286 SPINK5Q9NQ38 1064 aaPredicted RBP25.36■■□□□ 1.65
LIMS2-204ENST00000409286 NKTRP30414 1462 aaKnown RBP25.35■■□□□ 1.65
LIMS2-204ENST00000409286 WDR63Q8IWG1 891 aa25.35■■□□□ 1.65
LIMS2-204ENST00000409286 ZNF142P52746 1687 aaPredicted RBP25.34■■□□□ 1.65
LIMS2-204ENST00000409286 PLEKHG3A1L390 1219 aa25.33■■□□□ 1.65
LIMS2-204ENST00000409286 DIAPH1O60610 1272 aaKnown RBP25.33■■□□□ 1.65
LIMS2-204ENST00000409286 EXOC6Q8TAG9 804 aa25.33■■□□□ 1.65
LIMS2-204ENST00000409286 PIK3R4Q99570 1358 aa25.32■■□□□ 1.64
LIMS2-204ENST00000409286 MON2Q7Z3U7 1717 aa25.32■■□□□ 1.64
LIMS2-204ENST00000409286 PNNQ9H307 717 aaKnown RBP25.32■■□□□ 1.64
LIMS2-204ENST00000409286 NCKAP5LQ9HCH0 1330 aa25.31■■□□□ 1.64
LIMS2-204ENST00000409286 SETD1BQ9UPS6 1966 aaKnown RBP25.31■■□□□ 1.64
LIMS2-204ENST00000409286 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.31■■□□□ 1.64
LIMS2-204ENST00000409286 POLKQ9UBT6 870 aa25.31■■□□□ 1.64
LIMS2-204ENST00000409286 AKAP12Q02952 1782 aa25.3■■□□□ 1.64
LIMS2-204ENST00000409286 AATKQ6ZMQ8 1374 aa25.3■■□□□ 1.64
LIMS2-204ENST00000409286 U2SURPO15042 1029 aaKnown RBP25.3■■□□□ 1.64
LIMS2-204ENST00000409286 DMRT2Q9Y5R5 561 aa25.3■■□□□ 1.64
LIMS2-204ENST00000409286 NME9Q86XW9 330 aa25.29■■□□□ 1.64
LIMS2-204ENST00000409286 PLEKHF1Q96S99 279 aa25.29■■□□□ 1.64
LIMS2-204ENST00000409286 PLIN1O60240 522 aa25.29■■□□□ 1.64
LIMS2-204ENST00000409286 COG3Q96JB2 828 aa25.29■■□□□ 1.64
LIMS2-204ENST00000409286 RRP7AQ9Y3A4 280 aaKnown RBP25.29■■□□□ 1.64
LIMS2-204ENST00000409286 NEUROD2Q15784 382 aa25.28■■□□□ 1.64
LIMS2-204ENST00000409286 ITSN1Q15811 1721 aa25.28■■□□□ 1.64
LIMS2-204ENST00000409286 TOPAZ1Q8N9V7 1692 aa25.26■■□□□ 1.63
LIMS2-204ENST00000409286 ANKLE2Q86XL3 938 aa25.25■■□□□ 1.63
LIMS2-204ENST00000409286 ACEP12821 1306 aa25.24■■□□□ 1.63
LIMS2-204ENST00000409286 XRN1Q8IZH2 1706 aaKnown RBP25.24■■□□□ 1.63
LIMS2-204ENST00000409286 FCHSD2O94868 740 aa25.23■■□□□ 1.63
LIMS2-204ENST00000409286 TTC21BQ7Z4L5 1316 aa25.23■■□□□ 1.63
LIMS2-204ENST00000409286 MAPK8IP3Q9UPT6 1336 aa25.23■■□□□ 1.63
LIMS2-204ENST00000409286 CRBNQ96SW2 442 aa25.23■■□□□ 1.63
LIMS2-204ENST00000409286 ZRANB1Q9UGI0 708 aa25.22■■□□□ 1.63
LIMS2-204ENST00000409286 TMPOP42166 694 aaKnown RBP25.21■■□□□ 1.63
LIMS2-204ENST00000409286 MYH16Q9H6N6 1097 aa25.2■■□□□ 1.63
LIMS2-204ENST00000409286 CDK12Q9NYV4 1490 aaPredicted RBP25.2■■□□□ 1.62
LIMS2-204ENST00000409286 USP6P35125 1406 aa25.19■■□□□ 1.62
LIMS2-204ENST00000409286 MAP2P11137 1827 aaKnown RBP25.19■■□□□ 1.62
LIMS2-204ENST00000409286 PPM1GO15355 546 aaPredicted RBP25.19■■□□□ 1.62
LIMS2-204ENST00000409286 FBLN1P23142 703 aa25.19■■□□□ 1.62
LIMS2-204ENST00000409286 EMILIN1Q9Y6C2 1016 aa25.18■■□□□ 1.62
LIMS2-204ENST00000409286 KCNA6P17658 529 aa25.17■■□□□ 1.62
LIMS2-204ENST00000409286 C20orf194Q5TEA3 1177 aa25.17■■□□□ 1.62
LIMS2-204ENST00000409286 RBM19Q9Y4C8 960 aaKnown RBP25.17■■□□□ 1.62
LIMS2-204ENST00000409286 NRKQ7Z2Y5 1582 aa25.17■■□□□ 1.62
LIMS2-204ENST00000409286 IL13P35225 146 aa25.17■■□□□ 1.62
LIMS2-204ENST00000409286 IL16Q14005 1332 aa25.16■■□□□ 1.62
LIMS2-204ENST00000409286 SSH2Q76I76 1423 aa25.16■■□□□ 1.62
LIMS2-204ENST00000409286 ANKARQ7Z5J8 1434 aa25.16■■□□□ 1.62
LIMS2-204ENST00000409286 NUTM2FA1L443 756 aa25.16■■□□□ 1.62
LIMS2-204ENST00000409286 RSPH6AQ9H0K4 717 aa25.15■■□□□ 1.62
LIMS2-204ENST00000409286 TRIM35Q9UPQ4 493 aa25.15■■□□□ 1.62
LIMS2-204ENST00000409286 TTC21AQ8NDW8 1320 aa25.15■■□□□ 1.62
LIMS2-204ENST00000409286 BCAR3O75815 825 aa25.13■■□□□ 1.61
LIMS2-204ENST00000409286 NEFMP07197 916 aa25.13■■□□□ 1.61
LIMS2-204ENST00000409286 OVOS2A0A0J9YW53 1432 aa25.13■■□□□ 1.61
LIMS2-204ENST00000409286 OVOS2Q6IE36 1432 aa25.13■■□□□ 1.61
LIMS2-204ENST00000409286 CT47B1P0C2W7 299 aaPredicted RBP25.12■■□□□ 1.61
LIMS2-204ENST00000409286 RIPK4P57078 832 aa25.12■■□□□ 1.61
LIMS2-204ENST00000409286 USP31Q70CQ4 1352 aa25.11■■□□□ 1.61
LIMS2-204ENST00000409286 PDE3AQ14432 1141 aa25.1■■□□□ 1.61
LIMS2-204ENST00000409286 PRKAR2BP31323 418 aa25.1■■□□□ 1.61
LIMS2-204ENST00000409286 RARSP54136 660 aaKnown RBP25.1■■□□□ 1.61
LIMS2-204ENST00000409286 RRS1Q15050 365 aaKnown RBP25.1■■□□□ 1.61
LIMS2-204ENST00000409286 LRRC7Q96NW7 1537 aa25.09■■□□□ 1.61
LIMS2-204ENST00000409286 NGDNQ8NEJ9 315 aaKnown RBP25.09■■□□□ 1.61
LIMS2-204ENST00000409286 PMFBP1Q8TBY8 1022 aa25.08■■□□□ 1.61
LIMS2-204ENST00000409286 CHD2O14647 1828 aaKnown RBP25.08■■□□□ 1.61
LIMS2-204ENST00000409286 NFE2L2Q16236 605 aa25.06■■□□□ 1.6
LIMS2-204ENST00000409286 FANCIQ9NVI1 1328 aa25.04■■□□□ 1.6
LIMS2-204ENST00000409286 NALCNQ8IZF0 1738 aa25.04■■□□□ 1.6
LIMS2-204ENST00000409286 FMN2Q9NZ56 1722 aa25.04■■□□□ 1.6
LIMS2-204ENST00000409286 NPHP4O75161 1426 aaPredicted RBP25.04■■□□□ 1.6
LIMS2-204ENST00000409286 HMOX1P09601 288 aa25.04■■□□□ 1.6
LIMS2-204ENST00000409286 CANXP27824 592 aaKnown RBP25.01■■□□□ 1.59
LIMS2-204ENST00000409286 PHACTR3Q96KR7 559 aa25.01■■□□□ 1.59
LIMS2-204ENST00000409286 CALD1Q05682 793 aaKnown RBP25.01■■□□□ 1.59
LIMS2-204ENST00000409286 RGPD8O14715 1765 aaPredicted RBP25■■□□□ 1.59
LIMS2-204ENST00000409286 EIF4A2Q14240 407 aaKnown RBP24.99■■□□□ 1.59
LIMS2-204ENST00000409286 TSR2Q969E8 191 aaKnown RBP24.99■■□□□ 1.59
LIMS2-204ENST00000409286 TCERG1O14776 1098 aaKnown RBP24.98■■□□□ 1.59
LIMS2-204ENST00000409286 EXOSC9Q06265 439 aaKnown RBP24.98■■□□□ 1.59
LIMS2-204ENST00000409286 LMOD3Q0VAK6 560 aa24.97■■□□□ 1.59
LIMS2-204ENST00000409286 CENPQQ7L2Z9 268 aaPredicted RBP24.97■■□□□ 1.59
LIMS2-204ENST00000409286 KDM2BQ8NHM5 1336 aa24.97■■□□□ 1.59
LIMS2-204ENST00000409286 AAMPQ13685 434 aa24.97■■□□□ 1.59
LIMS2-204ENST00000409286 ADGRL3Q9HAR2 1447 aa24.95■■□□□ 1.59
LIMS2-204ENST00000409286 FRAT1Q92837 279 aaPredicted RBP24.95■■□□□ 1.58
LIMS2-204ENST00000409286 SBNO1A3KN83 1393 aa24.94■■□□□ 1.58
LIMS2-204ENST00000409286 PHF8Q9UPP1 1060 aa24.94■■□□□ 1.58
LIMS2-204ENST00000409286 HSP90AB2PQ58FF8 381 aa24.93■■□□□ 1.58
LIMS2-204ENST00000409286 MAP3K19Q56UN5 1328 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms