RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 PKP1Q13835 747 aa10.33□□□□□ -0.76
SNX13-201ENST00000409076 GAS2L2Q8NHY3 880 aa10.33□□□□□ -0.76
SNX13-201ENST00000409076 ABCC10Q5T3U5 1492 aa10.33□□□□□ -0.76
SNX13-201ENST00000409076 CALD1Q05682 793 aaKnown RBP10.33□□□□□ -0.76
SNX13-201ENST00000409076 GAS2L3Q86XJ1 694 aa10.33□□□□□ -0.76
SNX13-201ENST00000409076 EXOC6BQ9Y2D4 811 aa10.33□□□□□ -0.76
SNX13-201ENST00000409076 KDM5DQ9BY66 1539 aa10.33□□□□□ -0.76
SNX13-201ENST00000409076 TWISTNBQ3B726 338 aaPredicted RBP10.32□□□□□ -0.76
SNX13-201ENST00000409076 TBC1D9Q6ZT07 1266 aa10.32□□□□□ -0.76
SNX13-201ENST00000409076 UPF3BQ9BZI7 483 aaKnown RBP10.32□□□□□ -0.76
SNX13-201ENST00000409076 EIF2S2P20042 333 aaKnown RBP10.31□□□□□ -0.76
SNX13-201ENST00000409076 IDI1Q13907 227 aa10.31□□□□□ -0.76
SNX13-201ENST00000409076 CCDC27Q2M243 656 aa10.31□□□□□ -0.76
SNX13-201ENST00000409076 AEBP1Q8IUX7 1158 aa10.31□□□□□ -0.76
SNX13-201ENST00000409076 ADGRL2O95490 1459 aa10.31□□□□□ -0.76
SNX13-201ENST00000409076 FAM177BA6PVY3 158 aa10.31□□□□□ -0.76
SNX13-201ENST00000409076 NASPP49321 788 aaPredicted RBP10.31□□□□□ -0.76
SNX13-201ENST00000409076 FOSBP53539 338 aa10.31□□□□□ -0.76
SNX13-201ENST00000409076 ZGPATQ8N5A5 531 aaKnown RBP10.31□□□□□ -0.76
SNX13-201ENST00000409076 C8orf58Q8NAV2 365 aa10.31□□□□□ -0.76
SNX13-201ENST00000409076 ANO2Q9NQ90 1003 aa10.31□□□□□ -0.76
SNX13-201ENST00000409076 XPCQ01831 940 aaPredicted RBP10.3□□□□□ -0.76
SNX13-201ENST00000409076 SULT6B1Q6IMI4 303 aa10.3□□□□□ -0.76
SNX13-201ENST00000409076 IL1RAPL2Q9NP60 686 aa10.3□□□□□ -0.76
SNX13-201ENST00000409076 DDX11L8A8MPP1 907 aa10.3□□□□□ -0.76
SNX13-201ENST00000409076 ESPNB1AK53 854 aa10.3□□□□□ -0.76
SNX13-201ENST00000409076 CYB5RLQ6IPT4 315 aa10.3□□□□□ -0.76
SNX13-201ENST00000409076 WDR63Q8IWG1 891 aa10.3□□□□□ -0.76
SNX13-201ENST00000409076 ARHGEF12Q9NZN5 1544 aa10.3□□□□□ -0.76
SNX13-201ENST00000409076 SAMD9LQ8IVG5 1584 aa10.3□□□□□ -0.76
SNX13-201ENST00000409076 FYB1O15117 783 aa10.3□□□□□ -0.76
SNX13-201ENST00000409076 OS9Q13438 667 aaPredicted RBP10.3□□□□□ -0.76
SNX13-201ENST00000409076 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.3□□□□□ -0.76
SNX13-201ENST00000409076 TRIM35Q9UPQ4 493 aa10.3□□□□□ -0.76
SNX13-201ENST00000409076 CDC42BPAQ5VT25 1732 aa10.3□□□□□ -0.76
SNX13-201ENST00000409076 ADGBQ8N7X0 1667 aa10.29□□□□□ -0.76
SNX13-201ENST00000409076 VGFO15240 615 aaPredicted RBP10.29□□□□□ -0.76
SNX13-201ENST00000409076 GLIPR1L2Q4G1C9 344 aa10.29□□□□□ -0.76
SNX13-201ENST00000409076 ERCC6L2Q5T890 1561 aa10.29□□□□□ -0.76
SNX13-201ENST00000409076 PPFIA3O75145 1194 aa10.29□□□□□ -0.76
SNX13-201ENST00000409076 NEK4P51957 841 aa10.29□□□□□ -0.76
SNX13-201ENST00000409076 NAP1L2Q9ULW6 460 aaPredicted RBP10.29□□□□□ -0.76
SNX13-201ENST00000409076 MRE11P49959 708 aa10.28□□□□□ -0.76
SNX13-201ENST00000409076 PRDM10Q9NQV6 1147 aa10.28□□□□□ -0.76
SNX13-201ENST00000409076 SYCE3A1L190 88 aa10.28□□□□□ -0.76
SNX13-201ENST00000409076 TRMT2AQ8IZ69 625 aaKnown RBP10.28□□□□□ -0.76
SNX13-201ENST00000409076 FBXW7Q969H0 707 aa10.28□□□□□ -0.76
SNX13-201ENST00000409076 ZNF830Q96NB3 372 aaPredicted RBP10.28□□□□□ -0.76
SNX13-201ENST00000409076 FOXO3O43524 673 aa10.27□□□□□ -0.76
SNX13-201ENST00000409076 NGEFQ8N5V2 710 aa10.27□□□□□ -0.76
SNX13-201ENST00000409076 MBIPQ9NS73 344 aa10.27□□□□□ -0.76
SNX13-201ENST00000409076 K7ELQ4 463 aaPredicted RBP10.27□□□□□ -0.77
SNX13-201ENST00000409076 SLC4A2P04920 1241 aa10.27□□□□□ -0.77
SNX13-201ENST00000409076 ANTXR1Q9H6X2 564 aa10.27□□□□□ -0.77
SNX13-201ENST00000409076 TTC37Q6PGP7 1564 aa10.27□□□□□ -0.77
SNX13-201ENST00000409076 ERBB4Q15303 1308 aa10.27□□□□□ -0.77
SNX13-201ENST00000409076 ANXA1P04083 346 aa10.27□□□□□ -0.77
SNX13-201ENST00000409076 KIAA1211Q6ZU35 1233 aa10.27□□□□□ -0.77
SNX13-201ENST00000409076 CASC1Q6TDU7 716 aa10.26□□□□□ -0.77
SNX13-201ENST00000409076 KIF16BQ96L93 1317 aa10.26□□□□□ -0.77
SNX13-201ENST00000409076 FKBP5Q13451 457 aaPredicted RBP10.26□□□□□ -0.77
SNX13-201ENST00000409076 USHBP1Q8N6Y0 703 aa10.26□□□□□ -0.77
SNX13-201ENST00000409076 PKNOX2Q96KN3 472 aa10.26□□□□□ -0.77
SNX13-201ENST00000409076 RTF1Q92541 710 aaKnown RBP10.26□□□□□ -0.77
SNX13-201ENST00000409076 COG3Q96JB2 828 aa10.26□□□□□ -0.77
SNX13-201ENST00000409076 MEIS3Q99687 375 aa10.26□□□□□ -0.77
SNX13-201ENST00000409076 TSC1Q92574 1164 aa10.25□□□□□ -0.77
SNX13-201ENST00000409076 TRPM1Q7Z4N2 1603 aa10.25□□□□□ -0.77
SNX13-201ENST00000409076 CDC45O75419 566 aa10.25□□□□□ -0.77
SNX13-201ENST00000409076 KCNJ4P48050 445 aa10.25□□□□□ -0.77
SNX13-201ENST00000409076 ADCY10Q96PN6 1610 aa10.25□□□□□ -0.77
SNX13-201ENST00000409076 INSRP06213 1382 aa10.25□□□□□ -0.77
SNX13-201ENST00000409076 NUTM1Q86Y26 1132 aa10.25□□□□□ -0.77
SNX13-201ENST00000409076 ZBTB40Q9NUA8 1239 aa10.24□□□□□ -0.77
SNX13-201ENST00000409076 A0A1W2PP64 1363 aa10.24□□□□□ -0.77
SNX13-201ENST00000409076 SLC26A8Q96RN1 970 aa10.24□□□□□ -0.77
SNX13-201ENST00000409076 AK9Q5TCS8 1911 aa10.24□□□□□ -0.77
SNX13-201ENST00000409076 JARID2Q92833 1246 aaPredicted RBP10.24□□□□□ -0.77
SNX13-201ENST00000409076 ERVK-7P63135 1459 aa10.23□□□□□ -0.77
SNX13-201ENST00000409076 C17orf53Q8N3J3 647 aaPredicted RBP10.23□□□□□ -0.77
SNX13-201ENST00000409076 C14orf93Q9H972 538 aaKnown RBP10.23□□□□□ -0.77
SNX13-201ENST00000409076 TSPYL4Q9UJ04 414 aa10.23□□□□□ -0.77
SNX13-201ENST00000409076 PIK3C2GO75747 1445 aa10.23□□□□□ -0.77
SNX13-201ENST00000409076 KDM4AO75164 1064 aa10.23□□□□□ -0.77
SNX13-201ENST00000409076 CPA1P15085 419 aa10.23□□□□□ -0.77
SNX13-201ENST00000409076 NUCB1Q02818 461 aa10.23□□□□□ -0.77
SNX13-201ENST00000409076 A0A0G2JS52 829 aa10.22□□□□□ -0.77
SNX13-201ENST00000409076 BAG4O95429 457 aaKnown RBP10.22□□□□□ -0.77
SNX13-201ENST00000409076 AMPHP49418 695 aa10.22□□□□□ -0.77
SNX13-201ENST00000409076 ADGRL1O94910 1474 aa10.22□□□□□ -0.77
SNX13-201ENST00000409076 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.22□□□□□ -0.77
SNX13-201ENST00000409076 FIBPO43427 364 aa10.22□□□□□ -0.77
SNX13-201ENST00000409076 SYNMO15061 1565 aa10.22□□□□□ -0.77
SNX13-201ENST00000409076 ATP10AO60312 1499 aa10.22□□□□□ -0.77
SNX13-201ENST00000409076 ST18O60284 1047 aa10.22□□□□□ -0.77
SNX13-201ENST00000409076 G2E3Q7L622 706 aa10.22□□□□□ -0.77
SNX13-201ENST00000409076 SPC24Q8NBT2 197 aa10.22□□□□□ -0.77
SNX13-201ENST00000409076 GNAI1P63096 354 aa10.21□□□□□ -0.77
SNX13-201ENST00000409076 POLKQ9UBT6 870 aa10.21□□□□□ -0.77
SNX13-201ENST00000409076 HSP90AB2PQ58FF8 381 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms