RNA–Protein interactions for RNA: ENST00000407004.7

ILF3-202, Transcript of interleukin enhancer binding factor 3, humanhuman

TSL 1 (best) BASIC

Gene ILF3, Length 3,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ILF3-202ENST00000407004 PPM1GO15355 546 aaPredicted RBP15.88■□□□□ 0.13
ILF3-202ENST00000407004 NPC1L1Q9UHC9 1359 aa15.87■□□□□ 0.13
ILF3-202ENST00000407004 ATAD2Q6PL18 1390 aa15.86■□□□□ 0.13
ILF3-202ENST00000407004 NCKAP5LQ9HCH0 1330 aa15.85■□□□□ 0.13
ILF3-202ENST00000407004 NHSL1Q5SYE7 1610 aa15.83■□□□□ 0.12
ILF3-202ENST00000407004 RGS3P49796 1198 aa15.83■□□□□ 0.12
ILF3-202ENST00000407004 KIF20BQ96Q89 1820 aa15.83■□□□□ 0.12
ILF3-202ENST00000407004 KTN1Q86UP2 1357 aaKnown RBP15.82■□□□□ 0.12
ILF3-202ENST00000407004 HSP90AA2PQ14568 343 aaPredicted RBP15.82■□□□□ 0.12
ILF3-202ENST00000407004 TMF1P82094 1093 aa15.82■□□□□ 0.12
ILF3-202ENST00000407004 TRPM3Q9HCF6 1732 aaPredicted RBP15.82■□□□□ 0.12
ILF3-202ENST00000407004 DISP3Q9P2K9 1392 aa15.81■□□□□ 0.12
ILF3-202ENST00000407004 CD163L1Q9NR16 1453 aa15.81■□□□□ 0.12
ILF3-202ENST00000407004 FRAT1Q92837 279 aaPredicted RBP15.81■□□□□ 0.12
ILF3-202ENST00000407004 AMOTL2Q9Y2J4 779 aa15.81■□□□□ 0.12
ILF3-202ENST00000407004 EVC2Q86UK5 1308 aa15.81■□□□□ 0.12
ILF3-202ENST00000407004 CPSF1Q10570 1443 aaKnown RBP15.81■□□□□ 0.12
ILF3-202ENST00000407004 POLR3AO14802 1390 aaPredicted RBP15.8■□□□□ 0.12
ILF3-202ENST00000407004 ST20-MTHFSA0A0A6YYL1 179 aa15.8■□□□□ 0.12
ILF3-202ENST00000407004 PHRF1Q9P1Y6 1649 aaKnown RBP15.79■□□□□ 0.12
ILF3-202ENST00000407004 ZFP91Q96JP5 570 aaPredicted RBP15.79■□□□□ 0.12
ILF3-202ENST00000407004 MED1Q15648 1581 aaPredicted RBP15.78■□□□□ 0.12
ILF3-202ENST00000407004 PLEKHH1Q9ULM0 1364 aa15.78■□□□□ 0.12
ILF3-202ENST00000407004 SENP3-EIF4A1A0A087X0R7 540 aa15.78■□□□□ 0.12
ILF3-202ENST00000407004 CNGB1Q14028 1251 aaPredicted RBP15.78■□□□□ 0.12
ILF3-202ENST00000407004 KIF7Q2M1P5 1343 aa15.78■□□□□ 0.12
ILF3-202ENST00000407004 AHDC1Q5TGY3 1603 aaPredicted RBP15.77■□□□□ 0.12
ILF3-202ENST00000407004 SSH2Q76I76 1423 aa15.77■□□□□ 0.12
ILF3-202ENST00000407004 CFAP44Q96MT7 982 aa15.77■□□□□ 0.12
ILF3-202ENST00000407004 MARF1Q9Y4F3 1742 aaKnown RBP15.77■□□□□ 0.12
ILF3-202ENST00000407004 NSD2O96028 1365 aa15.77■□□□□ 0.11
ILF3-202ENST00000407004 CRYBG1Q9Y4K1 1723 aa15.77■□□□□ 0.11
ILF3-202ENST00000407004 ANKRD36BQ8N2N9 1353 aa15.76■□□□□ 0.11
ILF3-202ENST00000407004 ABCC6O95255 1503 aa15.76■□□□□ 0.11
ILF3-202ENST00000407004 ALS2Q96Q42 1657 aa15.76■□□□□ 0.11
ILF3-202ENST00000407004 CCDC184Q52MB2 194 aa15.75■□□□□ 0.11
ILF3-202ENST00000407004 TMEM132EQ6IEE7 984 aa15.75■□□□□ 0.11
ILF3-202ENST00000407004 PRAM1Q96QH2 718 aa15.75■□□□□ 0.11
ILF3-202ENST00000407004 MRS2Q9HD23 443 aa15.75■□□□□ 0.11
ILF3-202ENST00000407004 RGPD8O14715 1765 aaPredicted RBP15.75■□□□□ 0.11
ILF3-202ENST00000407004 WASLO00401 505 aaPredicted RBP15.75■□□□□ 0.11
ILF3-202ENST00000407004 PLEKHG3A1L390 1219 aa15.74■□□□□ 0.11
ILF3-202ENST00000407004 POLR3GLQ9BT43 218 aa15.74■□□□□ 0.11
ILF3-202ENST00000407004 COL22A1Q8NFW1 1626 aaPredicted RBP15.74■□□□□ 0.11
ILF3-202ENST00000407004 FAM43AQ8N2R8 423 aa15.73■□□□□ 0.11
ILF3-202ENST00000407004 NFKBIBQ15653 356 aa15.73■□□□□ 0.11
ILF3-202ENST00000407004 NUTM2DQ5VT03 806 aaPredicted RBP15.72■□□□□ 0.11
ILF3-202ENST00000407004 TRAK1Q9UPV9 953 aa15.72■□□□□ 0.11
ILF3-202ENST00000407004 SLC26A8Q96RN1 970 aa15.72■□□□□ 0.11
ILF3-202ENST00000407004 SLC4A3P48751 1232 aa15.71■□□□□ 0.11
ILF3-202ENST00000407004 C1orf167Q5SNV9 1468 aa15.7■□□□□ 0.1
ILF3-202ENST00000407004 EDC4Q6P2E9 1401 aaKnown RBP15.7■□□□□ 0.1
ILF3-202ENST00000407004 PDE4AP27815 886 aa15.69■□□□□ 0.1
ILF3-202ENST00000407004 HSPA2P54652 639 aa15.69■□□□□ 0.1
ILF3-202ENST00000407004 TMEM94Q12767 1356 aa15.69■□□□□ 0.1
ILF3-202ENST00000407004 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.69■□□□□ 0.1
ILF3-202ENST00000407004 C19orf44Q9H6X5 657 aa15.69■□□□□ 0.1
ILF3-202ENST00000407004 PRDM10Q9NQV6 1147 aa15.69■□□□□ 0.1
ILF3-202ENST00000407004 USP31Q70CQ4 1352 aa15.68■□□□□ 0.1
ILF3-202ENST00000407004 POGKQ9P215 609 aa15.67■□□□□ 0.1
ILF3-202ENST00000407004 SMG6Q86US8 1419 aaKnown RBP15.67■□□□□ 0.1
ILF3-202ENST00000407004 SLIT3O75094 1523 aa15.67■□□□□ 0.1
ILF3-202ENST00000407004 CANXP27824 592 aaKnown RBP15.67■□□□□ 0.1
ILF3-202ENST00000407004 MSH6P52701 1360 aa15.67■□□□□ 0.1
ILF3-202ENST00000407004 PIK3C2AO00443 1686 aa15.66■□□□□ 0.1
ILF3-202ENST00000407004 VGLL3A8MV65 326 aa15.66■□□□□ 0.1
ILF3-202ENST00000407004 PPIP5K1Q6PFW1 1433 aa15.66■□□□□ 0.1
ILF3-202ENST00000407004 ABCA3Q99758 1704 aa15.66■□□□□ 0.1
ILF3-202ENST00000407004 INSRP06213 1382 aa15.66■□□□□ 0.1
ILF3-202ENST00000407004 ZBED9Q6R2W3 1325 aa15.65■□□□□ 0.1
ILF3-202ENST00000407004 PXDNQ92626 1479 aa15.65■□□□□ 0.1
ILF3-202ENST00000407004 GTF2E1P29083 439 aaPredicted RBP15.65■□□□□ 0.1
ILF3-202ENST00000407004 CDK19Q9BWU1 502 aa15.65■□□□□ 0.1
ILF3-202ENST00000407004 SBNO1A3KN83 1393 aa15.65■□□□□ 0.1
ILF3-202ENST00000407004 PER1O15534 1290 aaPredicted RBP15.65■□□□□ 0.1
ILF3-202ENST00000407004 USP6P35125 1406 aa15.65■□□□□ 0.1
ILF3-202ENST00000407004 ZNF692Q9BU19 519 aaPredicted RBP15.64■□□□□ 0.09
ILF3-202ENST00000407004 SECISBP2LQ93073 1101 aaKnown RBP15.64■□□□□ 0.09
ILF3-202ENST00000407004 PRR36Q9H6K5 1346 aa15.63■□□□□ 0.09
ILF3-202ENST00000407004 CCDC61Q9Y6R9 512 aa15.63■□□□□ 0.09
ILF3-202ENST00000407004 HSP90AA1P07900 732 aaKnown RBP15.63■□□□□ 0.09
ILF3-202ENST00000407004 WAPLQ7Z5K2 1190 aa15.63■□□□□ 0.09
ILF3-202ENST00000407004 SHPRHQ149N8 1683 aa15.63■□□□□ 0.09
ILF3-202ENST00000407004 CADPS2Q86UW7 1296 aa15.63■□□□□ 0.09
ILF3-202ENST00000407004 PARD3Q8TEW0 1356 aa15.63■□□□□ 0.09
ILF3-202ENST00000407004 TTC21AQ8NDW8 1320 aa15.62■□□□□ 0.09
ILF3-202ENST00000407004 DDRGK1Q96HY6 314 aa15.62■□□□□ 0.09
ILF3-202ENST00000407004 MAPK8IP2Q13387 824 aaPredicted RBP15.62■□□□□ 0.09
ILF3-202ENST00000407004 TCERG1O14776 1098 aaKnown RBP15.61■□□□□ 0.09
ILF3-202ENST00000407004 CNPY4Q8N129 248 aa15.61■□□□□ 0.09
ILF3-202ENST00000407004 ROBO1Q9Y6N7 1651 aa15.61■□□□□ 0.09
ILF3-202ENST00000407004 OVOS2A0A0J9YW53 1432 aa15.6■□□□□ 0.09
ILF3-202ENST00000407004 OVOS2Q6IE36 1432 aa15.6■□□□□ 0.09
ILF3-202ENST00000407004 A0A1W2PP64 1363 aa15.6■□□□□ 0.09
ILF3-202ENST00000407004 ZNF335Q9H4Z2 1342 aaPredicted RBP15.6■□□□□ 0.09
ILF3-202ENST00000407004 STK26Q9P289 416 aa15.6■□□□□ 0.09
ILF3-202ENST00000407004 KIF24Q5T7B8 1368 aa15.6■□□□□ 0.09
ILF3-202ENST00000407004 PROSER2Q86WR7 435 aaPredicted RBP15.59■□□□□ 0.09
ILF3-202ENST00000407004 NUDT16Q96DE0 195 aaKnown RBP15.59■□□□□ 0.09
ILF3-202ENST00000407004 COL16A1Q07092 1604 aaPredicted RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 9499.4 ms