RNA–Protein interactions for RNA: ENST00000405957.6

LSP1-203, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LSP1, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-203ENST00000405957 GGNBP2Q9H3C7 697 aa22.66■■□□□ 1.22
LSP1-203ENST00000405957 DMRT2Q9Y5R5 561 aa22.66■■□□□ 1.22
LSP1-203ENST00000405957 NRKQ7Z2Y5 1582 aa22.66■■□□□ 1.22
LSP1-203ENST00000405957 ZNF521Q96K83 1311 aa22.66■■□□□ 1.22
LSP1-203ENST00000405957 COL3A1P02461 1466 aaPredicted RBP22.66■■□□□ 1.22
LSP1-203ENST00000405957 CCDC61Q9Y6R9 512 aa22.66■■□□□ 1.22
LSP1-203ENST00000405957 IQSEC2Q5JU85 1478 aa22.63■■□□□ 1.21
LSP1-203ENST00000405957 PRR36Q9H6K5 1346 aa22.63■■□□□ 1.21
LSP1-203ENST00000405957 B4GALNT3Q6L9W6 998 aa22.63■■□□□ 1.21
LSP1-203ENST00000405957 NKTRP30414 1462 aaKnown RBP22.62■■□□□ 1.21
LSP1-203ENST00000405957 GOLGA2Q08379 1002 aa22.62■■□□□ 1.21
LSP1-203ENST00000405957 CCDC146Q8IYE0 955 aa22.62■■□□□ 1.21
LSP1-203ENST00000405957 CDCA7LQ96GN5 454 aa22.62■■□□□ 1.21
LSP1-203ENST00000405957 RBM33Q96EV2 1170 aaKnown RBP22.61■■□□□ 1.21
LSP1-203ENST00000405957 CCDC136Q96JN2 1154 aa22.61■■□□□ 1.21
LSP1-203ENST00000405957 ZNF335Q9H4Z2 1342 aaPredicted RBP22.6■■□□□ 1.21
LSP1-203ENST00000405957 APAF1O14727 1248 aa22.58■■□□□ 1.21
LSP1-203ENST00000405957 NALCNQ8IZF0 1738 aa22.57■■□□□ 1.2
LSP1-203ENST00000405957 PROSER2Q86WR7 435 aaPredicted RBP22.57■■□□□ 1.2
LSP1-203ENST00000405957 ZNF692Q9BU19 519 aaPredicted RBP22.57■■□□□ 1.2
LSP1-203ENST00000405957 MAP2P11137 1827 aaKnown RBP22.57■■□□□ 1.2
LSP1-203ENST00000405957 PNPLA6Q8IY17 1366 aa22.57■■□□□ 1.2
LSP1-203ENST00000405957 FMN2Q9NZ56 1722 aa22.56■■□□□ 1.2
LSP1-203ENST00000405957 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.56■■□□□ 1.2
LSP1-203ENST00000405957 RUNDC1Q96C34 613 aa22.56■■□□□ 1.2
LSP1-203ENST00000405957 NCBP3Q53F19 620 aaKnown RBP22.55■■□□□ 1.2
LSP1-203ENST00000405957 DUSP27Q5VZP5 1158 aa22.55■■□□□ 1.2
LSP1-203ENST00000405957 RBM19Q9Y4C8 960 aaKnown RBP22.55■■□□□ 1.2
LSP1-203ENST00000405957 PLEKHG3A1L390 1219 aa22.54■■□□□ 1.2
LSP1-203ENST00000405957 RGPD8O14715 1765 aaPredicted RBP22.53■■□□□ 1.2
LSP1-203ENST00000405957 ANKARQ7Z5J8 1434 aa22.53■■□□□ 1.2
LSP1-203ENST00000405957 ADGRL3Q9HAR2 1447 aa22.53■■□□□ 1.2
LSP1-203ENST00000405957 SLFN5Q08AF3 891 aa22.53■■□□□ 1.2
LSP1-203ENST00000405957 TMEM94Q12767 1356 aa22.52■■□□□ 1.2
LSP1-203ENST00000405957 AATKQ6ZMQ8 1374 aa22.52■■□□□ 1.2
LSP1-203ENST00000405957 E9PSI1 815 aa22.52■■□□□ 1.2
LSP1-203ENST00000405957 TRMT2AQ8IZ69 625 aaKnown RBP22.52■■□□□ 1.2
LSP1-203ENST00000405957 CDK12Q9NYV4 1490 aaPredicted RBP22.51■■□□□ 1.19
LSP1-203ENST00000405957 USP6P35125 1406 aa22.51■■□□□ 1.19
LSP1-203ENST00000405957 C14orf37Q86TY3 774 aa22.51■■□□□ 1.19
LSP1-203ENST00000405957 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.5■■□□□ 1.19
LSP1-203ENST00000405957 NME9Q86XW9 330 aa22.5■■□□□ 1.19
LSP1-203ENST00000405957 XIRP1Q702N8 1843 aaKnown RBP22.49■■□□□ 1.19
LSP1-203ENST00000405957 LRRC7Q96NW7 1537 aa22.49■■□□□ 1.19
LSP1-203ENST00000405957 ACEP12821 1306 aa22.48■■□□□ 1.19
LSP1-203ENST00000405957 U2AF1L5P0DN76 240 aaPredicted RBP22.48■■□□□ 1.19
LSP1-203ENST00000405957 U2AF1Q01081 240 aaKnown RBP eCLIP22.48■■□□□ 1.19
LSP1-203ENST00000405957 OVOS2A0A0J9YW53 1432 aa22.47■■□□□ 1.19
LSP1-203ENST00000405957 OVOS2Q6IE36 1432 aa22.47■■□□□ 1.19
LSP1-203ENST00000405957 SSH2Q76I76 1423 aa22.47■■□□□ 1.19
LSP1-203ENST00000405957 COG3Q96JB2 828 aa22.47■■□□□ 1.19
LSP1-203ENST00000405957 POLKQ9UBT6 870 aa22.47■■□□□ 1.19
LSP1-203ENST00000405957 NCOA3Q9Y6Q9 1424 aa22.47■■□□□ 1.19
LSP1-203ENST00000405957 NUTM2FA1L443 756 aa22.46■■□□□ 1.19
LSP1-203ENST00000405957 DIAPH1O60610 1272 aaKnown RBP22.46■■□□□ 1.19
LSP1-203ENST00000405957 TCP11L2Q8N4U5 519 aa22.46■■□□□ 1.19
LSP1-203ENST00000405957 PHF23Q9BUL5 403 aaPredicted RBP22.46■■□□□ 1.19
LSP1-203ENST00000405957 TTC21BQ7Z4L5 1316 aa22.46■■□□□ 1.19
LSP1-203ENST00000405957 CCDC27Q2M243 656 aa22.45■■□□□ 1.19
LSP1-203ENST00000405957 WWC1Q8IX03 1113 aa22.45■■□□□ 1.19
LSP1-203ENST00000405957 EXOC6Q8TAG9 804 aa22.44■■□□□ 1.18
LSP1-203ENST00000405957 C19orf44Q9H6X5 657 aa22.43■■□□□ 1.18
LSP1-203ENST00000405957 U2SURPO15042 1029 aaKnown RBP22.43■■□□□ 1.18
LSP1-203ENST00000405957 LTBP4Q8N2S1 1624 aa22.43■■□□□ 1.18
LSP1-203ENST00000405957 USP54Q70EL1 1684 aa22.42■■□□□ 1.18
LSP1-203ENST00000405957 TTC21AQ8NDW8 1320 aa22.42■■□□□ 1.18
LSP1-203ENST00000405957 PLEKHF1Q96S99 279 aa22.41■■□□□ 1.18
LSP1-203ENST00000405957 ZRANB1Q9UGI0 708 aa22.41■■□□□ 1.18
LSP1-203ENST00000405957 PNNQ9H307 717 aaKnown RBP22.4■■□□□ 1.18
LSP1-203ENST00000405957 SPINK5Q9NQ38 1064 aaPredicted RBP22.4■■□□□ 1.18
LSP1-203ENST00000405957 PIK3C2AO00443 1686 aa22.4■■□□□ 1.18
LSP1-203ENST00000405957 WDR63Q8IWG1 891 aa22.4■■□□□ 1.18
LSP1-203ENST00000405957 FANCIQ9NVI1 1328 aa22.4■■□□□ 1.18
LSP1-203ENST00000405957 MSH6P52701 1360 aa22.39■■□□□ 1.18
LSP1-203ENST00000405957 DCCP43146 1447 aa22.39■■□□□ 1.17
LSP1-203ENST00000405957 RRP7AQ9Y3A4 280 aaKnown RBP22.38■■□□□ 1.17
LSP1-203ENST00000405957 EMILIN1Q9Y6C2 1016 aa22.38■■□□□ 1.17
LSP1-203ENST00000405957 MAPK8IP3Q9UPT6 1336 aa22.38■■□□□ 1.17
LSP1-203ENST00000405957 USP31Q70CQ4 1352 aa22.38■■□□□ 1.17
LSP1-203ENST00000405957 ATF3P18847 181 aa22.36■■□□□ 1.17
LSP1-203ENST00000405957 PPM1GO15355 546 aaPredicted RBP22.35■■□□□ 1.17
LSP1-203ENST00000405957 FCHSD2O94868 740 aa22.35■■□□□ 1.17
LSP1-203ENST00000405957 FBLN1P23142 703 aa22.35■■□□□ 1.17
LSP1-203ENST00000405957 NEUROD2Q15784 382 aa22.35■■□□□ 1.17
LSP1-203ENST00000405957 NGDNQ8NEJ9 315 aaKnown RBP22.35■■□□□ 1.17
LSP1-203ENST00000405957 PEAK1Q9H792 1746 aa22.35■■□□□ 1.17
LSP1-203ENST00000405957 MARF1Q9Y4F3 1742 aaKnown RBP22.35■■□□□ 1.17
LSP1-203ENST00000405957 PLIN1O60240 522 aa22.34■■□□□ 1.17
LSP1-203ENST00000405957 PMFBP1Q8TBY8 1022 aa22.34■■□□□ 1.17
LSP1-203ENST00000405957 CRBNQ96SW2 442 aa22.34■■□□□ 1.17
LSP1-203ENST00000405957 CADPS2Q86UW7 1296 aa22.33■■□□□ 1.17
LSP1-203ENST00000405957 MST1RQ04912 1400 aa22.33■■□□□ 1.16
LSP1-203ENST00000405957 IL13P35225 146 aa22.33■■□□□ 1.16
LSP1-203ENST00000405957 TMPOP42166 694 aaKnown RBP22.33■■□□□ 1.16
LSP1-203ENST00000405957 RSPH6AQ9H0K4 717 aa22.32■■□□□ 1.16
LSP1-203ENST00000405957 C1orf167Q5SNV9 1468 aa22.32■■□□□ 1.16
LSP1-203ENST00000405957 RRS1Q15050 365 aaKnown RBP22.31■■□□□ 1.16
LSP1-203ENST00000405957 RGPD1P0DJD0 1748 aa22.3■■□□□ 1.16
LSP1-203ENST00000405957 MYH16Q9H6N6 1097 aa22.3■■□□□ 1.16
LSP1-203ENST00000405957 TCERG1O14776 1098 aaKnown RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms