RNA–Protein interactions for RNA: ENST00000403537.3

THUMPD2-202, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-202ENST00000403537 QRICH2Q9H0J4 1663 aa25.33■■□□□ 1.65
THUMPD2-202ENST00000403537 ACEP12821 1306 aa25.33■■□□□ 1.64
THUMPD2-202ENST00000403537 RGS12O14924 1447 aa25.32■■□□□ 1.64
THUMPD2-202ENST00000403537 CARD11Q9BXL7 1154 aa25.32■■□□□ 1.64
THUMPD2-202ENST00000403537 BRD4O60885 1362 aaPredicted RBP25.31■■□□□ 1.64
THUMPD2-202ENST00000403537 TOPAZ1Q8N9V7 1692 aa25.3■■□□□ 1.64
THUMPD2-202ENST00000403537 ALS2Q96Q42 1657 aa25.3■■□□□ 1.64
THUMPD2-202ENST00000403537 GJD4Q96KN9 370 aaPredicted RBP25.3■■□□□ 1.64
THUMPD2-202ENST00000403537 CABP2Q9NPB3 220 aa25.3■■□□□ 1.64
THUMPD2-202ENST00000403537 PPIP5K1Q6PFW1 1433 aa25.29■■□□□ 1.64
THUMPD2-202ENST00000403537 PLEKHG5O94827 1062 aa25.29■■□□□ 1.64
THUMPD2-202ENST00000403537 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.29■■□□□ 1.64
THUMPD2-202ENST00000403537 VPS72Q15906 364 aa25.25■■□□□ 1.63
THUMPD2-202ENST00000403537 UPF1Q92900 1129 aaKnown RBP eCLIP25.25■■□□□ 1.63
THUMPD2-202ENST00000403537 SBNO2Q9Y2G9 1366 aa25.25■■□□□ 1.63
THUMPD2-202ENST00000403537 ABCA3Q99758 1704 aa25.25■■□□□ 1.63
THUMPD2-202ENST00000403537 FAM83GA6ND36 823 aa25.24■■□□□ 1.63
THUMPD2-202ENST00000403537 NWD2Q9ULI1 1742 aa25.23■■□□□ 1.63
THUMPD2-202ENST00000403537 ATAD2Q6PL18 1390 aa25.22■■□□□ 1.63
THUMPD2-202ENST00000403537 CABP1Q9NZU7 370 aa25.22■■□□□ 1.63
THUMPD2-202ENST00000403537 USP47Q96K76 1375 aa25.21■■□□□ 1.63
THUMPD2-202ENST00000403537 ABTB2Q8N961 1025 aa25.21■■□□□ 1.63
THUMPD2-202ENST00000403537 PRDM11Q9NQV5 511 aa25.21■■□□□ 1.63
THUMPD2-202ENST00000403537 SLC24A1O60721 1099 aa25.2■■□□□ 1.62
THUMPD2-202ENST00000403537 ZNF692Q9BU19 519 aaPredicted RBP25.2■■□□□ 1.62
THUMPD2-202ENST00000403537 NLRP13Q86W25 1043 aa25.19■■□□□ 1.62
THUMPD2-202ENST00000403537 CCDC9Q9Y3X0 531 aaKnown RBP25.19■■□□□ 1.62
THUMPD2-202ENST00000403537 COL14A1Q05707 1796 aaKnown RBP25.18■■□□□ 1.62
THUMPD2-202ENST00000403537 BTG4Q9NY30 223 aa25.18■■□□□ 1.62
THUMPD2-202ENST00000403537 PLCH1Q4KWH8 1693 aa25.17■■□□□ 1.62
THUMPD2-202ENST00000403537 USP6P35125 1406 aa25.17■■□□□ 1.62
THUMPD2-202ENST00000403537 ST20-MTHFSA0A0A6YYL1 179 aa25.15■■□□□ 1.62
THUMPD2-202ENST00000403537 NUTM2GQ5VZR2 741 aa25.15■■□□□ 1.62
THUMPD2-202ENST00000403537 USP19O94966 1318 aa25.14■■□□□ 1.62
THUMPD2-202ENST00000403537 KIAA0232Q92628 1395 aa25.14■■□□□ 1.61
THUMPD2-202ENST00000403537 CRYBG1Q9Y4K1 1723 aa25.14■■□□□ 1.61
THUMPD2-202ENST00000403537 GLI3P10071 1580 aa25.14■■□□□ 1.61
THUMPD2-202ENST00000403537 ONECUT3O60422 494 aaPredicted RBP25.13■■□□□ 1.61
THUMPD2-202ENST00000403537 PUS7Q96PZ0 661 aaKnown RBP25.13■■□□□ 1.61
THUMPD2-202ENST00000403537 CPDO75976 1380 aa25.11■■□□□ 1.61
THUMPD2-202ENST00000403537 ZC3H6P61129 1189 aaKnown RBP25.1■■□□□ 1.61
THUMPD2-202ENST00000403537 CCDC125Q86Z20 511 aa25.1■■□□□ 1.61
THUMPD2-202ENST00000403537 SEPT12Q8IYM1 358 aa25.1■■□□□ 1.61
THUMPD2-202ENST00000403537 TESK2Q96S53 571 aa25.1■■□□□ 1.61
THUMPD2-202ENST00000403537 PHRF1Q9P1Y6 1649 aaKnown RBP25.1■■□□□ 1.61
THUMPD2-202ENST00000403537 GCP02774 474 aa25.09■■□□□ 1.61
THUMPD2-202ENST00000403537 NLRP6P59044 892 aa25.09■■□□□ 1.61
THUMPD2-202ENST00000403537 SSH2Q76I76 1423 aa25.09■■□□□ 1.61
THUMPD2-202ENST00000403537 TTC21AQ8NDW8 1320 aa25.09■■□□□ 1.61
THUMPD2-202ENST00000403537 NRAPQ86VF7 1730 aa25.07■■□□□ 1.6
THUMPD2-202ENST00000403537 SPATA31A5Q5VU36 1347 aa25.07■■□□□ 1.6
THUMPD2-202ENST00000403537 SPATA31A7Q8IWB4 1347 aa25.07■■□□□ 1.6
THUMPD2-202ENST00000403537 CPSF1Q10570 1443 aaKnown RBP25.06■■□□□ 1.6
THUMPD2-202ENST00000403537 HSPA5P11021 654 aaKnown RBP25.06■■□□□ 1.6
THUMPD2-202ENST00000403537 CHRNA2Q15822 529 aa25.06■■□□□ 1.6
THUMPD2-202ENST00000403537 TTC21BQ7Z4L5 1316 aa25.06■■□□□ 1.6
THUMPD2-202ENST00000403537 KTN1Q86UP2 1357 aaKnown RBP25.05■■□□□ 1.6
THUMPD2-202ENST00000403537 NRKQ7Z2Y5 1582 aa25.05■■□□□ 1.6
THUMPD2-202ENST00000403537 A0A0G2JS52 829 aa25.04■■□□□ 1.6
THUMPD2-202ENST00000403537 EVA1CP58658 441 aa25.04■■□□□ 1.6
THUMPD2-202ENST00000403537 MYT1Q01538 1121 aa25.04■■□□□ 1.6
THUMPD2-202ENST00000403537 HDGFL2Q7Z4V5 671 aaPredicted RBP25.03■■□□□ 1.6
THUMPD2-202ENST00000403537 EIF4G2P78344 907 aaKnown RBP eCLIP25.02■■□□□ 1.6
THUMPD2-202ENST00000403537 FAM98CQ17RN3 349 aaKnown RBP25.02■■□□□ 1.6
THUMPD2-202ENST00000403537 KRT27Q7Z3Y8 459 aa25.02■■□□□ 1.6
THUMPD2-202ENST00000403537 KCNH5Q8NCM2 988 aa25.02■■□□□ 1.6
THUMPD2-202ENST00000403537 TERF2IPQ9NYB0 399 aa25.02■■□□□ 1.6
THUMPD2-202ENST00000403537 NINLQ9Y2I6 1382 aa25.02■■□□□ 1.6
THUMPD2-202ENST00000403537 TMC1Q8TDI8 760 aa25.01■■□□□ 1.59
THUMPD2-202ENST00000403537 STRN4Q9NRL3 753 aa25.01■■□□□ 1.59
THUMPD2-202ENST00000403537 SPATA31A1Q5TZJ5 1347 aa25■■□□□ 1.59
THUMPD2-202ENST00000403537 SLIT3O75094 1523 aa25■■□□□ 1.59
THUMPD2-202ENST00000403537 AKAP12Q02952 1782 aa24.98■■□□□ 1.59
THUMPD2-202ENST00000403537 AATKQ6ZMQ8 1374 aa24.97■■□□□ 1.59
THUMPD2-202ENST00000403537 BLMP54132 1417 aaPredicted RBP24.96■■□□□ 1.59
THUMPD2-202ENST00000403537 PIK3C2AO00443 1686 aa24.96■■□□□ 1.59
THUMPD2-202ENST00000403537 TMF1P82094 1093 aa24.95■■□□□ 1.58
THUMPD2-202ENST00000403537 SF3B2Q13435 895 aaKnown RBP24.95■■□□□ 1.58
THUMPD2-202ENST00000403537 CDCA8Q53HL2 280 aa24.95■■□□□ 1.58
THUMPD2-202ENST00000403537 SLC12A5Q9H2X9 1139 aa24.95■■□□□ 1.58
THUMPD2-202ENST00000403537 CAMTA1Q9Y6Y1 1673 aa24.94■■□□□ 1.58
THUMPD2-202ENST00000403537 BARGINQ6ZT62 677 aa24.94■■□□□ 1.58
THUMPD2-202ENST00000403537 THRAP3Q9Y2W1 955 aaKnown RBP24.94■■□□□ 1.58
THUMPD2-202ENST00000403537 LMO7Q8WWI1 1683 aa24.94■■□□□ 1.58
THUMPD2-202ENST00000403537 EDC4Q6P2E9 1401 aaKnown RBP24.94■■□□□ 1.58
THUMPD2-202ENST00000403537 USP31Q70CQ4 1352 aa24.93■■□□□ 1.58
THUMPD2-202ENST00000403537 CD163L1Q9NR16 1453 aa24.92■■□□□ 1.58
THUMPD2-202ENST00000403537 ZBTB7CA1YPR0 619 aa24.92■■□□□ 1.58
THUMPD2-202ENST00000403537 ZEB1P37275 1124 aaPredicted RBP24.92■■□□□ 1.58
THUMPD2-202ENST00000403537 TCP11L2Q8N4U5 519 aa24.92■■□□□ 1.58
THUMPD2-202ENST00000403537 MON2Q7Z3U7 1717 aa24.92■■□□□ 1.58
THUMPD2-202ENST00000403537 LARP1Q6PKG0 1096 aaKnown RBP24.91■■□□□ 1.58
THUMPD2-202ENST00000403537 ARHGEF25Q86VW2 580 aa24.91■■□□□ 1.58
THUMPD2-202ENST00000403537 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.91■■□□□ 1.58
THUMPD2-202ENST00000403537 MYOM1P52179 1685 aa24.91■■□□□ 1.58
THUMPD2-202ENST00000403537 COL5A2P05997 1499 aaPredicted RBP24.9■■□□□ 1.58
THUMPD2-202ENST00000403537 BRWD3Q6RI45 1802 aa24.9■■□□□ 1.58
THUMPD2-202ENST00000403537 THSD7AQ9UPZ6 1657 aa24.89■■□□□ 1.58
THUMPD2-202ENST00000403537 C11orf95C9JLR9 678 aaPredicted RBP24.89■■□□□ 1.58
THUMPD2-202ENST00000403537 USP35Q9P2H5 1018 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms