RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 COL14A1Q05707 1796 aaKnown RBP17.86■□□□□ 0.45
SPTLC1P3-201ENST00000403408 DISP2A7MBM2 1401 aa17.86■□□□□ 0.45
SPTLC1P3-201ENST00000403408 EZH2Q15910 746 aaKnown RBP17.85■□□□□ 0.45
SPTLC1P3-201ENST00000403408 ANKARQ7Z5J8 1434 aa17.85■□□□□ 0.45
SPTLC1P3-201ENST00000403408 ADGRB2O60241 1585 aa17.84■□□□□ 0.45
SPTLC1P3-201ENST00000403408 DHX57Q6P158 1386 aaKnown RBP17.84■□□□□ 0.45
SPTLC1P3-201ENST00000403408 HIRIP3Q9BW71 556 aaPredicted RBP17.84■□□□□ 0.45
SPTLC1P3-201ENST00000403408 ADGRB1O14514 1584 aa17.83■□□□□ 0.45
SPTLC1P3-201ENST00000403408 DLC1Q96QB1 1528 aa17.83■□□□□ 0.45
SPTLC1P3-201ENST00000403408 CAMKK2Q96RR4 588 aa17.83■□□□□ 0.44
SPTLC1P3-201ENST00000403408 ACIN1Q9UKV3 1341 aaKnown RBP17.82■□□□□ 0.44
SPTLC1P3-201ENST00000403408 UTRNP46939 3433 aa17.8■□□□□ 0.44
SPTLC1P3-201ENST00000403408 TRIM37O94972 964 aa17.79■□□□□ 0.44
SPTLC1P3-201ENST00000403408 POGKQ9P215 609 aa17.79■□□□□ 0.44
SPTLC1P3-201ENST00000403408 SPATA31A1Q5TZJ5 1347 aa17.78■□□□□ 0.44
SPTLC1P3-201ENST00000403408 MINK1Q8N4C8 1332 aaPredicted RBP17.78■□□□□ 0.44
SPTLC1P3-201ENST00000403408 TRAK1Q9UPV9 953 aa17.78■□□□□ 0.44
SPTLC1P3-201ENST00000403408 CHRNA2Q15822 529 aa17.77■□□□□ 0.44
SPTLC1P3-201ENST00000403408 TULP4Q9NRJ4 1543 aa17.77■□□□□ 0.43
SPTLC1P3-201ENST00000403408 KIAA0232Q92628 1395 aa17.76■□□□□ 0.43
SPTLC1P3-201ENST00000403408 WASLO00401 505 aaPredicted RBP17.75■□□□□ 0.43
SPTLC1P3-201ENST00000403408 PRDM11Q9NQV5 511 aa17.75■□□□□ 0.43
SPTLC1P3-201ENST00000403408 GPRASP1Q5JY77 1395 aa17.75■□□□□ 0.43
SPTLC1P3-201ENST00000403408 RREB1Q92766 1687 aa17.74■□□□□ 0.43
SPTLC1P3-201ENST00000403408 NUP188Q5SRE5 1749 aa17.74■□□□□ 0.43
SPTLC1P3-201ENST00000403408 PHRF1Q9P1Y6 1649 aaKnown RBP17.73■□□□□ 0.43
SPTLC1P3-201ENST00000403408 PAK3O75914 559 aaPredicted RBP17.72■□□□□ 0.43
SPTLC1P3-201ENST00000403408 APBA3O96018 575 aa17.72■□□□□ 0.43
SPTLC1P3-201ENST00000403408 STRN4Q9NRL3 753 aa17.72■□□□□ 0.43
SPTLC1P3-201ENST00000403408 ATP7BP35670 1465 aa17.71■□□□□ 0.43
SPTLC1P3-201ENST00000403408 ZC3H6P61129 1189 aaKnown RBP17.71■□□□□ 0.43
SPTLC1P3-201ENST00000403408 NUTM2GQ5VZR2 741 aa17.71■□□□□ 0.43
SPTLC1P3-201ENST00000403408 FAM196AQ6ZSG2 479 aa17.71■□□□□ 0.43
SPTLC1P3-201ENST00000403408 NGDNQ8NEJ9 315 aaKnown RBP17.71■□□□□ 0.43
SPTLC1P3-201ENST00000403408 CAMTA1Q9Y6Y1 1673 aa17.69■□□□□ 0.42
SPTLC1P3-201ENST00000403408 ADRA2BP18089 450 aa17.69■□□□□ 0.42
SPTLC1P3-201ENST00000403408 USP35Q9P2H5 1018 aa17.69■□□□□ 0.42
SPTLC1P3-201ENST00000403408 SSH2Q76I76 1423 aa17.67■□□□□ 0.42
SPTLC1P3-201ENST00000403408 LARP1Q6PKG0 1096 aaKnown RBP17.67■□□□□ 0.42
SPTLC1P3-201ENST00000403408 NUDT16Q96DE0 195 aaKnown RBP17.67■□□□□ 0.42
SPTLC1P3-201ENST00000403408 PARD3Q8TEW0 1356 aa17.66■□□□□ 0.42
SPTLC1P3-201ENST00000403408 YY1P25490 414 aa17.66■□□□□ 0.42
SPTLC1P3-201ENST00000403408 BARGINQ6ZT62 677 aa17.66■□□□□ 0.42
SPTLC1P3-201ENST00000403408 KDM2AQ9Y2K7 1162 aa17.66■□□□□ 0.42
SPTLC1P3-201ENST00000403408 LMO7Q8WWI1 1683 aa17.66■□□□□ 0.42
SPTLC1P3-201ENST00000403408 ARHGEF28Q8N1W1 1705 aaKnown RBP17.66■□□□□ 0.42
SPTLC1P3-201ENST00000403408 EIF3AQ14152 1382 aaKnown RBP17.66■□□□□ 0.42
SPTLC1P3-201ENST00000403408 NRKQ7Z2Y5 1582 aa17.65■□□□□ 0.42
SPTLC1P3-201ENST00000403408 TOPAZ1Q8N9V7 1692 aa17.63■□□□□ 0.41
SPTLC1P3-201ENST00000403408 ITSN1Q15811 1721 aa17.63■□□□□ 0.41
SPTLC1P3-201ENST00000403408 POLR3AO14802 1390 aaPredicted RBP17.63■□□□□ 0.41
SPTLC1P3-201ENST00000403408 PTF1AQ7RTS3 328 aa17.62■□□□□ 0.41
SPTLC1P3-201ENST00000403408 DCAF11Q8TEB1 546 aa17.62■□□□□ 0.41
SPTLC1P3-201ENST00000403408 CDK19Q9BWU1 502 aa17.62■□□□□ 0.41
SPTLC1P3-201ENST00000403408 PEAK1Q9H792 1746 aa17.61■□□□□ 0.41
SPTLC1P3-201ENST00000403408 PDE3BQ13370 1112 aa17.61■□□□□ 0.41
SPTLC1P3-201ENST00000403408 NBPF8Q3BBV2 869 aa17.61■□□□□ 0.41
SPTLC1P3-201ENST00000403408 ACEP12821 1306 aa17.61■□□□□ 0.41
SPTLC1P3-201ENST00000403408 TCP11L2Q8N4U5 519 aa17.6■□□□□ 0.41
SPTLC1P3-201ENST00000403408 PDGFDQ9GZP0 370 aaPredicted RBP17.6■□□□□ 0.41
SPTLC1P3-201ENST00000403408 ANO8Q9HCE9 1232 aaPredicted RBP17.6■□□□□ 0.41
SPTLC1P3-201ENST00000403408 USP19O94966 1318 aa17.6■□□□□ 0.41
SPTLC1P3-201ENST00000403408 PARP4Q9UKK3 1724 aaKnown RBP17.59■□□□□ 0.41
SPTLC1P3-201ENST00000403408 CPDO75976 1380 aa17.59■□□□□ 0.41
SPTLC1P3-201ENST00000403408 EVA1CP58658 441 aa17.59■□□□□ 0.41
SPTLC1P3-201ENST00000403408 SBF2Q86WG5 1849 aa17.58■□□□□ 0.41
SPTLC1P3-201ENST00000403408 RAB3GAP2Q9H2M9 1393 aa17.58■□□□□ 0.4
SPTLC1P3-201ENST00000403408 PLEKHG3A1L390 1219 aa17.58■□□□□ 0.4
SPTLC1P3-201ENST00000403408 KCNQ2O43526 872 aa17.58■□□□□ 0.4
SPTLC1P3-201ENST00000403408 NBPF14Q5TI25 921 aa17.57■□□□□ 0.4
SPTLC1P3-201ENST00000403408 SPON1Q9HCB6 807 aa17.57■□□□□ 0.4
SPTLC1P3-201ENST00000403408 CASZ1Q86V15 1759 aa17.57■□□□□ 0.4
SPTLC1P3-201ENST00000403408 COL5A2P05997 1499 aaPredicted RBP17.56■□□□□ 0.4
SPTLC1P3-201ENST00000403408 PROM2Q8N271 834 aa17.55■□□□□ 0.4
SPTLC1P3-201ENST00000403408 ABTB2Q8N961 1025 aa17.55■□□□□ 0.4
SPTLC1P3-201ENST00000403408 CCDC61Q9Y6R9 512 aa17.55■□□□□ 0.4
SPTLC1P3-201ENST00000403408 NINLQ9Y2I6 1382 aa17.54■□□□□ 0.4
SPTLC1P3-201ENST00000403408 GCP02774 474 aa17.54■□□□□ 0.4
SPTLC1P3-201ENST00000403408 THRAP3Q9Y2W1 955 aaKnown RBP17.53■□□□□ 0.4
SPTLC1P3-201ENST00000403408 LRRC37A3O60309 1634 aa17.53■□□□□ 0.4
SPTLC1P3-201ENST00000403408 GOLGB1Q14789 3259 aaKnown RBP17.53■□□□□ 0.4
SPTLC1P3-201ENST00000403408 PPP1R1BQ9UD71 204 aaPredicted RBP17.52■□□□□ 0.4
SPTLC1P3-201ENST00000403408 RGPD3A6NKT7 1758 aaPredicted RBP17.52■□□□□ 0.4
SPTLC1P3-201ENST00000403408 RGPD4Q7Z3J3 1758 aa17.52■□□□□ 0.4
SPTLC1P3-201ENST00000403408 COL18A1P39060 1754 aa17.51■□□□□ 0.39
SPTLC1P3-201ENST00000403408 OVOS2A0A0G2JMS6 1433 aa17.5■□□□□ 0.39
SPTLC1P3-201ENST00000403408 OVOS2A0A0J9YW53 1432 aa17.5■□□□□ 0.39
SPTLC1P3-201ENST00000403408 OVOS2Q6IE36 1432 aa17.5■□□□□ 0.39
SPTLC1P3-201ENST00000403408 PLSCR1O15162 318 aa17.5■□□□□ 0.39
SPTLC1P3-201ENST00000403408 PTGER2P43116 358 aa17.5■□□□□ 0.39
SPTLC1P3-201ENST00000403408 NBPF1Q3BBV0 1214 aa17.5■□□□□ 0.39
SPTLC1P3-201ENST00000403408 MYOM1P52179 1685 aa17.49■□□□□ 0.39
SPTLC1P3-201ENST00000403408 CRB1P82279 1406 aa17.49■□□□□ 0.39
SPTLC1P3-201ENST00000403408 MARCH10Q8NA82 808 aaPredicted RBP17.49■□□□□ 0.39
SPTLC1P3-201ENST00000403408 AXIN2Q9Y2T1 843 aa17.49■□□□□ 0.39
SPTLC1P3-201ENST00000403408 ZBTB7AO95365 584 aa17.48■□□□□ 0.39
SPTLC1P3-201ENST00000403408 PPIP5K1Q6PFW1 1433 aa17.47■□□□□ 0.39
SPTLC1P3-201ENST00000403408 NLRP13Q86W25 1043 aa17.47■□□□□ 0.39
SPTLC1P3-201ENST00000403408 STAC3Q96MF2 364 aa17.47■□□□□ 0.39
SPTLC1P3-201ENST00000403408 CABP2Q9NPB3 220 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms