RNA–Protein interactions for RNA: ENST00000400181.8

KDM1A-202, Transcript of lysine demethylase 1A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KDM1A, Length 3,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-202ENST00000400181 TET3O43151 1660 aa22.54■■□□□ 1.2
KDM1A-202ENST00000400181 CD109Q6YHK3 1445 aa22.54■■□□□ 1.2
KDM1A-202ENST00000400181 MYOM2P54296 1465 aa22.53■■□□□ 1.2
KDM1A-202ENST00000400181 SNX21Q969T3 373 aa22.53■■□□□ 1.2
KDM1A-202ENST00000400181 EVC2Q86UK5 1308 aa22.53■■□□□ 1.2
KDM1A-202ENST00000400181 CT47B1P0C2W7 299 aaPredicted RBP22.53■■□□□ 1.2
KDM1A-202ENST00000400181 PLEKHF1Q96S99 279 aa22.53■■□□□ 1.2
KDM1A-202ENST00000400181 FBLN1P23142 703 aa22.52■■□□□ 1.2
KDM1A-202ENST00000400181 THUMPD2Q9BTF0 503 aaKnown RBP22.52■■□□□ 1.2
KDM1A-202ENST00000400181 GAS2L2Q8NHY3 880 aa22.52■■□□□ 1.2
KDM1A-202ENST00000400181 KIF2CQ99661 725 aa22.52■■□□□ 1.2
KDM1A-202ENST00000400181 KIAA1210Q9ULL0 1709 aa22.52■■□□□ 1.2
KDM1A-202ENST00000400181 DDX49Q9Y6V7 483 aaKnown RBP22.51■■□□□ 1.19
KDM1A-202ENST00000400181 TBC1D9Q6ZT07 1266 aa22.51■■□□□ 1.19
KDM1A-202ENST00000400181 KIF16BQ96L93 1317 aa22.5■■□□□ 1.19
KDM1A-202ENST00000400181 PKNOX2Q96KN3 472 aa22.5■■□□□ 1.19
KDM1A-202ENST00000400181 SHROOM2Q13796 1616 aa22.5■■□□□ 1.19
KDM1A-202ENST00000400181 K7ELQ4 463 aaPredicted RBP22.5■■□□□ 1.19
KDM1A-202ENST00000400181 ZMYND15Q9H091 742 aa22.49■■□□□ 1.19
KDM1A-202ENST00000400181 RRP9O43818 475 aaKnown RBP22.49■■□□□ 1.19
KDM1A-202ENST00000400181 NASPP49321 788 aaPredicted RBP22.49■■□□□ 1.19
KDM1A-202ENST00000400181 CIZ1Q9ULV3 898 aaPredicted RBP22.48■■□□□ 1.19
KDM1A-202ENST00000400181 NCOA3Q9Y6Q9 1424 aa22.48■■□□□ 1.19
KDM1A-202ENST00000400181 BMP2KLQ5H9B9 411 aa22.48■■□□□ 1.19
KDM1A-202ENST00000400181 SKOR2Q2VWA4 1001 aaPredicted RBP22.47■■□□□ 1.19
KDM1A-202ENST00000400181 GOLGA6L22H0YM25 854 aa22.47■■□□□ 1.19
KDM1A-202ENST00000400181 ATP7AQ04656 1500 aa22.47■■□□□ 1.19
KDM1A-202ENST00000400181 ISY1Q9ULR0 285 aaKnown RBP22.46■■□□□ 1.19
KDM1A-202ENST00000400181 KIF1BO60333 1816 aa22.46■■□□□ 1.19
KDM1A-202ENST00000400181 ANKRD36BQ8N2N9 1353 aa22.46■■□□□ 1.19
KDM1A-202ENST00000400181 MROH2AA6NES4 1674 aa22.46■■□□□ 1.19
KDM1A-202ENST00000400181 ANP32BQ92688 251 aaKnown RBP22.46■■□□□ 1.19
KDM1A-202ENST00000400181 MINK1Q8N4C8 1332 aaPredicted RBP22.45■■□□□ 1.18
KDM1A-202ENST00000400181 ZCCHC11Q5TAX3 1644 aaKnown RBP22.45■■□□□ 1.18
KDM1A-202ENST00000400181 DIAPH1O60610 1272 aaKnown RBP22.45■■□□□ 1.18
KDM1A-202ENST00000400181 MCTP1Q6DN14 999 aa22.45■■□□□ 1.18
KDM1A-202ENST00000400181 CHD1O14646 1710 aa22.45■■□□□ 1.18
KDM1A-202ENST00000400181 KIAA1211Q6ZU35 1233 aa22.44■■□□□ 1.18
KDM1A-202ENST00000400181 FANCAO15360 1455 aa22.44■■□□□ 1.18
KDM1A-202ENST00000400181 HMOX1P09601 288 aa22.44■■□□□ 1.18
KDM1A-202ENST00000400181 TSPYL6Q8N831 410 aa22.44■■□□□ 1.18
KDM1A-202ENST00000400181 QRICH2Q9H0J4 1663 aa22.43■■□□□ 1.18
KDM1A-202ENST00000400181 APBB1O00213 710 aa22.43■■□□□ 1.18
KDM1A-202ENST00000400181 A0A1W2PP64 1363 aa22.43■■□□□ 1.18
KDM1A-202ENST00000400181 ABCC11Q96J66 1382 aa22.43■■□□□ 1.18
KDM1A-202ENST00000400181 PRKAR2BP31323 418 aa22.42■■□□□ 1.18
KDM1A-202ENST00000400181 BAG4O95429 457 aaKnown RBP22.42■■□□□ 1.18
KDM1A-202ENST00000400181 CAVIN1Q6NZI2 390 aaKnown RBP22.42■■□□□ 1.18
KDM1A-202ENST00000400181 FYB1O15117 783 aa22.42■■□□□ 1.18
KDM1A-202ENST00000400181 ZBTB7BO15156 539 aaPredicted RBP22.42■■□□□ 1.18
KDM1A-202ENST00000400181 DEPDC5O75140 1603 aa22.42■■□□□ 1.18
KDM1A-202ENST00000400181 PPIP5K1Q6PFW1 1433 aa22.41■■□□□ 1.18
KDM1A-202ENST00000400181 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.4■■□□□ 1.182e-6■■■□□ 14.8
KDM1A-202ENST00000400181 ADGRL1O94910 1474 aa22.4■■□□□ 1.18
KDM1A-202ENST00000400181 AK9Q5TCS8 1911 aa22.4■■□□□ 1.18
KDM1A-202ENST00000400181 SIRT2Q8IXJ6 389 aa22.4■■□□□ 1.18
KDM1A-202ENST00000400181 ATAD2Q6PL18 1390 aa22.4■■□□□ 1.18
KDM1A-202ENST00000400181 MSNP26038 577 aaKnown RBP22.39■■□□□ 1.18
KDM1A-202ENST00000400181 PKP1Q13835 747 aa22.39■■□□□ 1.18
KDM1A-202ENST00000400181 RBM10P98175 930 aaKnown RBP22.39■■□□□ 1.17
KDM1A-202ENST00000400181 CCDC173Q0VFZ6 552 aa22.39■■□□□ 1.17
KDM1A-202ENST00000400181 FOXD4L5Q5VV16 416 aaPredicted RBP22.39■■□□□ 1.17
KDM1A-202ENST00000400181 FOXD4L4Q8WXT5 416 aaPredicted RBP22.39■■□□□ 1.17
KDM1A-202ENST00000400181 GCC1Q96CN9 775 aa22.38■■□□□ 1.17
KDM1A-202ENST00000400181 CHAMP1Q96JM3 812 aa22.38■■□□□ 1.17
KDM1A-202ENST00000400181 NRXN1Q9ULB1 1477 aa22.38■■□□□ 1.17
KDM1A-202ENST00000400181 VWDEQ8N2E2 1590 aa22.37■■□□□ 1.17
KDM1A-202ENST00000400181 MYO3AQ8NEV4 1616 aa22.37■■□□□ 1.17
KDM1A-202ENST00000400181 IL16Q14005 1332 aa22.37■■□□□ 1.17
KDM1A-202ENST00000400181 ALDH1L2Q3SY69 923 aa22.37■■□□□ 1.17
KDM1A-202ENST00000400181 C16orf71Q8IYS4 520 aaPredicted RBP22.37■■□□□ 1.17
KDM1A-202ENST00000400181 CDC45O75419 566 aa22.37■■□□□ 1.17
KDM1A-202ENST00000400181 PHACTR3Q96KR7 559 aa22.37■■□□□ 1.17
KDM1A-202ENST00000400181 NSD2O96028 1365 aa22.37■■□□□ 1.17
KDM1A-202ENST00000400181 CALD1Q05682 793 aaKnown RBP22.36■■□□□ 1.17
KDM1A-202ENST00000400181 NCBP3Q53F19 620 aaKnown RBP22.36■■□□□ 1.17
KDM1A-202ENST00000400181 ZSCAN30Q86W11 494 aa22.36■■□□□ 1.17
KDM1A-202ENST00000400181 ADGRB2O60241 1585 aa22.36■■□□□ 1.17
KDM1A-202ENST00000400181 ARID3AQ99856 593 aa22.36■■□□□ 1.17
KDM1A-202ENST00000400181 EFCAB6Q5THR3 1501 aa22.36■■□□□ 1.17
KDM1A-202ENST00000400181 KLHL40Q2TBA0 621 aa22.35■■□□□ 1.17
KDM1A-202ENST00000400181 GSPT1P15170 499 aaKnown RBP22.35■■□□□ 1.17
KDM1A-202ENST00000400181 PTMSP20962 102 aa22.35■■□□□ 1.17
KDM1A-202ENST00000400181 VAMP4O75379 141 aa22.34■■□□□ 1.17
KDM1A-202ENST00000400181 TERF2IPQ9NYB0 399 aa22.34■■□□□ 1.17
KDM1A-202ENST00000400181 RBM27Q9P2N5 1060 aaKnown RBP22.34■■□□□ 1.17
KDM1A-202ENST00000400181 PPRC1Q5VV67 1664 aaKnown RBP22.34■■□□□ 1.17
KDM1A-202ENST00000400181 TULP4Q9NRJ4 1543 aa22.34■■□□□ 1.17
KDM1A-202ENST00000400181 ADGRB1O14514 1584 aa22.34■■□□□ 1.17
KDM1A-202ENST00000400181 MROH1Q8NDA8 1641 aa22.34■■□□□ 1.17
KDM1A-202ENST00000400181 ZBTB7CA1YPR0 619 aa22.34■■□□□ 1.17
KDM1A-202ENST00000400181 MRPL50Q8N5N7 158 aaKnown RBP22.34■■□□□ 1.17
KDM1A-202ENST00000400181 NPATQ14207 1427 aa22.33■■□□□ 1.17
KDM1A-202ENST00000400181 VGFO15240 615 aaPredicted RBP22.33■■□□□ 1.16
KDM1A-202ENST00000400181 TPM2P07951 284 aa22.32■■□□□ 1.16
KDM1A-202ENST00000400181 R3HCC1Q9Y3T6 440 aaKnown RBP22.32■■□□□ 1.16
KDM1A-202ENST00000400181 PRPF40AO75400 957 aaKnown RBP22.32■■□□□ 1.16
KDM1A-202ENST00000400181 OTUD7AQ8TE49 926 aaPredicted RBP22.32■■□□□ 1.16
KDM1A-202ENST00000400181 PRAM1Q96QH2 718 aa22.32■■□□□ 1.16
KDM1A-202ENST00000400181 ZGPATQ8N5A5 531 aaKnown RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms