RNA–Protein interactions for RNA: ENST00000399598.6

UBXN2B-201, Transcript of UBX domain protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2B, Length 5,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2B-201ENST00000399598 OLFM4Q6UX06 510 aa18.23■□□□□ 0.51
UBXN2B-201ENST00000399598 ABTB2Q8N961 1025 aa18.23■□□□□ 0.51
UBXN2B-201ENST00000399598 MTMR7Q9Y216 660 aa18.23■□□□□ 0.51
UBXN2B-201ENST00000399598 CTDP1Q9Y5B0 961 aaPredicted RBP18.23■□□□□ 0.51
UBXN2B-201ENST00000399598 KINO60870 393 aaKnown RBP18.23■□□□□ 0.51
UBXN2B-201ENST00000399598 PDCP20941 246 aa18.23■□□□□ 0.51
UBXN2B-201ENST00000399598 RRBP1Q9P2E9 1410 aaKnown RBP18.22■□□□□ 0.51
UBXN2B-201ENST00000399598 SAMD1Q6SPF0 538 aaPredicted RBP18.22■□□□□ 0.51
UBXN2B-201ENST00000399598 IL27Q8NEV9 243 aa18.22■□□□□ 0.51
UBXN2B-201ENST00000399598 SULT6B1Q6IMI4 303 aa18.22■□□□□ 0.51
UBXN2B-201ENST00000399598 TSPY26PQ9H489 355 aa18.21■□□□□ 0.51
UBXN2B-201ENST00000399598 ATF3P18847 181 aa18.21■□□□□ 0.51
UBXN2B-201ENST00000399598 ATF7IPQ6VMQ6 1270 aa18.21■□□□□ 0.51
UBXN2B-201ENST00000399598 CEBPZQ03701 1054 aaKnown RBP18.21■□□□□ 0.51
UBXN2B-201ENST00000399598 HDGFL1Q5TGJ6 251 aa18.2■□□□□ 0.5
UBXN2B-201ENST00000399598 RBM33Q96EV2 1170 aaKnown RBP18.2■□□□□ 0.5
UBXN2B-201ENST00000399598 FAM177BA6PVY3 158 aa18.19■□□□□ 0.5
UBXN2B-201ENST00000399598 ZNF428Q96B54 188 aa18.19■□□□□ 0.5
UBXN2B-201ENST00000399598 CABP1Q9NZU7 370 aa18.19■□□□□ 0.5
UBXN2B-201ENST00000399598 HSP90B2PQ58FF3 399 aa18.19■□□□□ 0.5
UBXN2B-201ENST00000399598 MPNDQ8N594 471 aa18.19■□□□□ 0.5
UBXN2B-201ENST00000399598 TTLL5Q6EMB2 1281 aa18.19■□□□□ 0.5
UBXN2B-201ENST00000399598 CCDC43Q96MW1 224 aaKnown RBP18.19■□□□□ 0.5
UBXN2B-201ENST00000399598 RUFY1Q96T51 708 aa18.19■□□□□ 0.5
UBXN2B-201ENST00000399598 BRMS1Q9HCU9 246 aa18.19■□□□□ 0.5
UBXN2B-201ENST00000399598 LETM1O95202 739 aaPredicted RBP18.18■□□□□ 0.5
UBXN2B-201ENST00000399598 XBP1P17861 261 aa18.18■□□□□ 0.5
UBXN2B-201ENST00000399598 TXNDC2Q86VQ3 553 aa18.18■□□□□ 0.5
UBXN2B-201ENST00000399598 MVPQ14764 893 aaKnown RBP18.18■□□□□ 0.5
UBXN2B-201ENST00000399598 SMC2O95347 1197 aa18.18■□□□□ 0.5
UBXN2B-201ENST00000399598 TBC1D2BQ9UPU7 963 aa18.18■□□□□ 0.5
UBXN2B-201ENST00000399598 OFD1O75665 1012 aa18.17■□□□□ 0.5
UBXN2B-201ENST00000399598 HFM1A2PYH4 1435 aa18.17■□□□□ 0.5
UBXN2B-201ENST00000399598 PLEKHO1Q53GL0 409 aaPredicted RBP18.17■□□□□ 0.5
UBXN2B-201ENST00000399598 WDR63Q8IWG1 891 aa18.17■□□□□ 0.5
UBXN2B-201ENST00000399598 SART3Q15020 963 aaKnown RBP18.16■□□□□ 0.5
UBXN2B-201ENST00000399598 SPC24Q8NBT2 197 aa18.16■□□□□ 0.5
UBXN2B-201ENST00000399598 KIAA1107Q9UPP5 1409 aa18.16■□□□□ 0.5
UBXN2B-201ENST00000399598 K7ELQ4 463 aaPredicted RBP18.16■□□□□ 0.5
UBXN2B-201ENST00000399598 HIP1O00291 1037 aa18.16■□□□□ 0.5
UBXN2B-201ENST00000399598 LRRCC1Q9C099 1032 aa18.16■□□□□ 0.5
UBXN2B-201ENST00000399598 CCDC173Q0VFZ6 552 aa18.15■□□□□ 0.5
UBXN2B-201ENST00000399598 PRDM2Q13029 1718 aa18.15■□□□□ 0.5
UBXN2B-201ENST00000399598 STK38Q15208 465 aa18.15■□□□□ 0.5
UBXN2B-201ENST00000399598 STK3Q13188 491 aa18.15■□□□□ 0.5
UBXN2B-201ENST00000399598 ESCO1Q5FWF5 840 aa18.15■□□□□ 0.5
UBXN2B-201ENST00000399598 RRP12Q5JTH9 1297 aaKnown RBP18.15■□□□□ 0.5
UBXN2B-201ENST00000399598 CHD1LQ86WJ1 897 aa18.15■□□□□ 0.5
UBXN2B-201ENST00000399598 ERC1Q8IUD2 1116 aa18.15■□□□□ 0.5
UBXN2B-201ENST00000399598 CDK19Q9BWU1 502 aa18.15■□□□□ 0.5
UBXN2B-201ENST00000399598 SIL1Q9H173 461 aa18.15■□□□□ 0.5
UBXN2B-201ENST00000399598 ACBD3Q9H3P7 528 aa18.15■□□□□ 0.5
UBXN2B-201ENST00000399598 CYP46A1Q9Y6A2 500 aa18.15■□□□□ 0.5
UBXN2B-201ENST00000399598 ARHGAP5Q13017 1502 aa18.15■□□□□ 0.5
UBXN2B-201ENST00000399598 SMG6Q86US8 1419 aaKnown RBP18.14■□□□□ 0.49
UBXN2B-201ENST00000399598 CCT4P50991 539 aaKnown RBP18.14■□□□□ 0.49
UBXN2B-201ENST00000399598 MAP4K4O95819 1239 aaPredicted RBP18.14■□□□□ 0.49
UBXN2B-201ENST00000399598 CWC22Q9HCG8 908 aaKnown RBP18.14■□□□□ 0.49
UBXN2B-201ENST00000399598 SRCIN1Q9C0H9 1055 aa18.13■□□□□ 0.49
UBXN2B-201ENST00000399598 CT47A1Q5JQC4 288 aaPredicted RBP18.13■□□□□ 0.49
UBXN2B-201ENST00000399598 AK7Q96M32 723 aa18.13■□□□□ 0.49
UBXN2B-201ENST00000399598 GPRASP1Q5JY77 1395 aa18.13■□□□□ 0.49
UBXN2B-201ENST00000399598 CT47B1P0C2W7 299 aaPredicted RBP18.13■□□□□ 0.49
UBXN2B-201ENST00000399598 SCAPERQ9BY12 1400 aa18.12■□□□□ 0.49
UBXN2B-201ENST00000399598 MAP7D2Q96T17 732 aa18.12■□□□□ 0.49
UBXN2B-201ENST00000399598 BRPF1P55201 1214 aaPredicted RBP18.12■□□□□ 0.49
UBXN2B-201ENST00000399598 MTERF4Q7Z6M4 381 aaKnown RBP18.12■□□□□ 0.49
UBXN2B-201ENST00000399598 RBM10P98175 930 aaKnown RBP18.12■□□□□ 0.49
UBXN2B-201ENST00000399598 CAGE1Q8TC20 777 aa18.11■□□□□ 0.49
UBXN2B-201ENST00000399598 ZNF396Q96N95 335 aaPredicted RBP18.11■□□□□ 0.49
UBXN2B-201ENST00000399598 WDR33Q9C0J8 1336 aaKnown RBP18.11■□□□□ 0.49
UBXN2B-201ENST00000399598 GRPEL1Q9HAV7 217 aa18.11■□□□□ 0.49
UBXN2B-201ENST00000399598 EPS15P42566 896 aa18.11■□□□□ 0.49
UBXN2B-201ENST00000399598 RBM42Q9BTD8 480 aaKnown RBP18.11■□□□□ 0.49
UBXN2B-201ENST00000399598 C9orf84Q5VXU9 1444 aa18.1■□□□□ 0.49
UBXN2B-201ENST00000399598 MCM4P33991 863 aa18.1■□□□□ 0.49
UBXN2B-201ENST00000399598 HMGN5P82970 282 aaKnown RBP18.1■□□□□ 0.49
UBXN2B-201ENST00000399598 CCDC192P0DO97 292 aa18.1■□□□□ 0.49
UBXN2B-201ENST00000399598 CDR1P51861 262 aa18.09■□□□□ 0.49
UBXN2B-201ENST00000399598 IL1RAPL2Q9NP60 686 aa18.09■□□□□ 0.49
UBXN2B-201ENST00000399598 LARP1BQ659C4 914 aaKnown RBP18.09■□□□□ 0.49
UBXN2B-201ENST00000399598 ME1P48163 572 aa18.09■□□□□ 0.49
UBXN2B-201ENST00000399598 ZNF530Q6P9A1 599 aaPredicted RBP18.09■□□□□ 0.49
UBXN2B-201ENST00000399598 ERBINQ96RT1 1412 aa18.09■□□□□ 0.49
UBXN2B-201ENST00000399598 SRGAP3O43295 1099 aa18.08■□□□□ 0.49
UBXN2B-201ENST00000399598 KRT85P78386 507 aa18.08■□□□□ 0.49
UBXN2B-201ENST00000399598 CCDC158Q5M9N0 1113 aa18.08■□□□□ 0.49
UBXN2B-201ENST00000399598 TNMDQ9H2S6 317 aa18.08■□□□□ 0.49
UBXN2B-201ENST00000399598 CNNM1Q9NRU3 951 aa18.08■□□□□ 0.49
UBXN2B-201ENST00000399598 IKQ13123 557 aaPredicted RBP18.08■□□□□ 0.48
UBXN2B-201ENST00000399598 RRS1Q15050 365 aaKnown RBP18.08■□□□□ 0.48
UBXN2B-201ENST00000399598 FILIP1LQ4L180 1135 aa18.08■□□□□ 0.48
UBXN2B-201ENST00000399598 STK11IPQ8N1F8 1099 aa18.08■□□□□ 0.48
UBXN2B-201ENST00000399598 SLFN5Q08AF3 891 aa18.07■□□□□ 0.48
UBXN2B-201ENST00000399598 ZNF692Q9BU19 519 aaPredicted RBP18.07■□□□□ 0.48
UBXN2B-201ENST00000399598 TTC39AQ5SRH9 613 aa18.07■□□□□ 0.48
UBXN2B-201ENST00000399598 AEBP1Q8IUX7 1158 aa18.07■□□□□ 0.48
UBXN2B-201ENST00000399598 KIF6Q6ZMV9 814 aa18.06■□□□□ 0.48
UBXN2B-201ENST00000399598 SKAP1Q86WV1 359 aa18.06■□□□□ 0.48
UBXN2B-201ENST00000399598 TMEM57Q8N5G2 664 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms