RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 MPHOSPH9Q99550 1183 aa26.98■■□□□ 1.91
UFD1-202ENST00000399523 GPRASP1Q5JY77 1395 aa26.97■■□□□ 1.91
UFD1-202ENST00000399523 ADGRB2O60241 1585 aa26.97■■□□□ 1.91
UFD1-202ENST00000399523 DLC1Q96QB1 1528 aa26.97■■□□□ 1.91
UFD1-202ENST00000399523 FAM196AQ6ZSG2 479 aa26.96■■□□□ 1.91
UFD1-202ENST00000399523 POGKQ9P215 609 aa26.96■■□□□ 1.91
UFD1-202ENST00000399523 PARD3Q8TEW0 1356 aa26.96■■□□□ 1.91
UFD1-202ENST00000399523 ACIN1Q9UKV3 1341 aaKnown RBP26.95■■□□□ 1.91
UFD1-202ENST00000399523 TRIM37O94972 964 aa26.95■■□□□ 1.9
UFD1-202ENST00000399523 CRYBG1Q9Y4K1 1723 aa26.95■■□□□ 1.9
UFD1-202ENST00000399523 SPATA31A1Q5TZJ5 1347 aa26.94■■□□□ 1.9
UFD1-202ENST00000399523 PRDM11Q9NQV5 511 aa26.93■■□□□ 1.9
UFD1-202ENST00000399523 YY1P25490 414 aa26.92■■□□□ 1.9
UFD1-202ENST00000399523 PRR36Q9H6K5 1346 aa26.91■■□□□ 1.9
UFD1-202ENST00000399523 EIF3AQ14152 1382 aaKnown RBP26.9■■□□□ 1.9
UFD1-202ENST00000399523 APBA3O96018 575 aa26.9■■□□□ 1.9
UFD1-202ENST00000399523 HIRIP3Q9BW71 556 aaPredicted RBP26.87■■□□□ 1.89
UFD1-202ENST00000399523 TULP4Q9NRJ4 1543 aa26.86■■□□□ 1.89
UFD1-202ENST00000399523 RREB1Q92766 1687 aa26.86■■□□□ 1.89
UFD1-202ENST00000399523 KIAA0232Q92628 1395 aa26.85■■□□□ 1.89
UFD1-202ENST00000399523 ADGRB1O14514 1584 aa26.85■■□□□ 1.89
UFD1-202ENST00000399523 NGDNQ8NEJ9 315 aaKnown RBP26.85■■□□□ 1.89
UFD1-202ENST00000399523 WASLO00401 505 aaPredicted RBP26.84■■□□□ 1.89
UFD1-202ENST00000399523 PAK3O75914 559 aaPredicted RBP26.84■■□□□ 1.89
UFD1-202ENST00000399523 MINK1Q8N4C8 1332 aaPredicted RBP26.83■■□□□ 1.89
UFD1-202ENST00000399523 NUP188Q5SRE5 1749 aa26.82■■□□□ 1.88
UFD1-202ENST00000399523 CHRNA2Q15822 529 aa26.82■■□□□ 1.88
UFD1-202ENST00000399523 NBPF8Q3BBV2 869 aa26.82■■□□□ 1.88
UFD1-202ENST00000399523 NBPF14Q5TI25 921 aa26.82■■□□□ 1.88
UFD1-202ENST00000399523 BARGINQ6ZT62 677 aa26.82■■□□□ 1.88
UFD1-202ENST00000399523 STRN4Q9NRL3 753 aa26.82■■□□□ 1.88
UFD1-202ENST00000399523 TRAK1Q9UPV9 953 aa26.82■■□□□ 1.88
UFD1-202ENST00000399523 PDE3BQ13370 1112 aa26.79■■□□□ 1.88
UFD1-202ENST00000399523 SPON1Q9HCB6 807 aa26.77■■□□□ 1.88
UFD1-202ENST00000399523 USP35Q9P2H5 1018 aa26.77■■□□□ 1.88
UFD1-202ENST00000399523 PHRF1Q9P1Y6 1649 aaKnown RBP26.76■■□□□ 1.87
UFD1-202ENST00000399523 ZC3H6P61129 1189 aaKnown RBP26.76■■□□□ 1.87
UFD1-202ENST00000399523 SSH2Q76I76 1423 aa26.75■■□□□ 1.87
UFD1-202ENST00000399523 NINLQ9Y2I6 1382 aa26.74■■□□□ 1.87
UFD1-202ENST00000399523 KCNQ2O43526 872 aa26.74■■□□□ 1.87
UFD1-202ENST00000399523 PPP1R1BQ9UD71 204 aaPredicted RBP26.74■■□□□ 1.87
UFD1-202ENST00000399523 ATP7BP35670 1465 aa26.74■■□□□ 1.87
UFD1-202ENST00000399523 EVA1CP58658 441 aa26.73■■□□□ 1.87
UFD1-202ENST00000399523 DCAF8L1A6NGE4 600 aa26.72■■□□□ 1.87
UFD1-202ENST00000399523 TCP11L2Q8N4U5 519 aa26.72■■□□□ 1.87
UFD1-202ENST00000399523 ITSN1Q15811 1721 aa26.71■■□□□ 1.87
UFD1-202ENST00000399523 NUDT16Q96DE0 195 aaKnown RBP26.71■■□□□ 1.87
UFD1-202ENST00000399523 LARP1Q6PKG0 1096 aaKnown RBP26.7■■□□□ 1.86
UFD1-202ENST00000399523 CAMTA1Q9Y6Y1 1673 aa26.7■■□□□ 1.86
UFD1-202ENST00000399523 NUTM2GQ5VZR2 741 aa26.69■■□□□ 1.86
UFD1-202ENST00000399523 THRAP3Q9Y2W1 955 aaKnown RBP26.68■■□□□ 1.86
UFD1-202ENST00000399523 C11orf95C9JLR9 678 aaPredicted RBP26.67■■□□□ 1.86
UFD1-202ENST00000399523 POLR3AO14802 1390 aaPredicted RBP26.66■■□□□ 1.86
UFD1-202ENST00000399523 CPDO75976 1380 aa26.66■■□□□ 1.86
UFD1-202ENST00000399523 LMO7Q8WWI1 1683 aa26.65■■□□□ 1.86
UFD1-202ENST00000399523 PARP4Q9UKK3 1724 aaKnown RBP26.64■■□□□ 1.85
UFD1-202ENST00000399523 NRKQ7Z2Y5 1582 aa26.63■■□□□ 1.85
UFD1-202ENST00000399523 ACEP12821 1306 aa26.62■■□□□ 1.85
UFD1-202ENST00000399523 RGPD3A6NKT7 1758 aaPredicted RBP26.61■■□□□ 1.85
UFD1-202ENST00000399523 RGPD4Q7Z3J3 1758 aa26.61■■□□□ 1.85
UFD1-202ENST00000399523 PLSCR1O15162 318 aa26.61■■□□□ 1.85
UFD1-202ENST00000399523 STAC3Q96MF2 364 aa26.61■■□□□ 1.85
UFD1-202ENST00000399523 KDM2AQ9Y2K7 1162 aa26.61■■□□□ 1.85
UFD1-202ENST00000399523 USP19O94966 1318 aa26.61■■□□□ 1.85
UFD1-202ENST00000399523 ARHGEF28Q8N1W1 1705 aaKnown RBP26.6■■□□□ 1.85
UFD1-202ENST00000399523 CDK19Q9BWU1 502 aa26.6■■□□□ 1.85
UFD1-202ENST00000399523 UTRNP46939 3433 aa26.59■■□□□ 1.85
UFD1-202ENST00000399523 PLEKHG3A1L390 1219 aa26.59■■□□□ 1.85
UFD1-202ENST00000399523 ABTB2Q8N961 1025 aa26.59■■□□□ 1.85
UFD1-202ENST00000399523 DCAF11Q8TEB1 546 aa26.59■■□□□ 1.85
UFD1-202ENST00000399523 CCDC61Q9Y6R9 512 aa26.59■■□□□ 1.85
UFD1-202ENST00000399523 PEAK1Q9H792 1746 aa26.59■■□□□ 1.85
UFD1-202ENST00000399523 TOPAZ1Q8N9V7 1692 aa26.58■■□□□ 1.85
UFD1-202ENST00000399523 OVOS2A0A0G2JMS6 1433 aa26.57■■□□□ 1.84
UFD1-202ENST00000399523 OVOS2A0A0J9YW53 1432 aa26.57■■□□□ 1.84
UFD1-202ENST00000399523 OVOS2Q6IE36 1432 aa26.57■■□□□ 1.84
UFD1-202ENST00000399523 CASZ1Q86V15 1759 aa26.57■■□□□ 1.84
UFD1-202ENST00000399523 SBF2Q86WG5 1849 aa26.57■■□□□ 1.84
UFD1-202ENST00000399523 COL5A2P05997 1499 aaPredicted RBP26.56■■□□□ 1.84
UFD1-202ENST00000399523 ANO8Q9HCE9 1232 aaPredicted RBP26.56■■□□□ 1.84
UFD1-202ENST00000399523 GCP02774 474 aa26.55■■□□□ 1.84
UFD1-202ENST00000399523 CRB1P82279 1406 aa26.54■■□□□ 1.84
UFD1-202ENST00000399523 NLRP13Q86W25 1043 aa26.53■■□□□ 1.84
UFD1-202ENST00000399523 ZNF784Q8NCA9 323 aaPredicted RBP26.52■■□□□ 1.84
UFD1-202ENST00000399523 BCL11BQ9C0K0 894 aaPredicted RBP26.52■■□□□ 1.84
UFD1-202ENST00000399523 PDGFDQ9GZP0 370 aaPredicted RBP26.51■■□□□ 1.83
UFD1-202ENST00000399523 PROM2Q8N271 834 aa26.5■■□□□ 1.83
UFD1-202ENST00000399523 PTGER2P43116 358 aa26.49■■□□□ 1.83
UFD1-202ENST00000399523 LRRC37A3O60309 1634 aa26.48■■□□□ 1.83
UFD1-202ENST00000399523 DDB1Q16531 1140 aa26.48■■□□□ 1.83
UFD1-202ENST00000399523 PTF1AQ7RTS3 328 aa26.48■■□□□ 1.83
UFD1-202ENST00000399523 ZBTB7AO95365 584 aa26.47■■□□□ 1.83
UFD1-202ENST00000399523 MYOM1P52179 1685 aa26.46■■□□□ 1.83
UFD1-202ENST00000399523 BCL9O00512 1426 aa26.46■■□□□ 1.83
UFD1-202ENST00000399523 AATKQ6ZMQ8 1374 aa26.46■■□□□ 1.83
UFD1-202ENST00000399523 BRD4O60885 1362 aaPredicted RBP26.44■■□□□ 1.82
UFD1-202ENST00000399523 MARCH10Q8NA82 808 aaPredicted RBP26.42■■□□□ 1.82
UFD1-202ENST00000399523 SYT17Q9BSW7 474 aa26.42■■□□□ 1.82
UFD1-202ENST00000399523 ATF5Q9Y2D1 282 aaPredicted RBP26.42■■□□□ 1.82
UFD1-202ENST00000399523 RAB3GAP2Q9H2M9 1393 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms