RNA–Protein interactions for RNA: ENST00000397766.3

PGBD4-201, Transcript of piggyBac transposable element derived 4, humanhuman

APPRIS P1 BASIC

Gene PGBD4, Length 6,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4-201ENST00000397766 NECTIN2Q92692 538 aa7.47□□□□□ -1.21
PGBD4-201ENST00000397766 GNL3LQ9NVN8 582 aaKnown RBP7.47□□□□□ -1.21
PGBD4-201ENST00000397766 ODF2Q5BJF6 829 aa7.47□□□□□ -1.21
PGBD4-201ENST00000397766 IFT57Q9NWB7 429 aa7.47□□□□□ -1.21
PGBD4-201ENST00000397766 TXLNAP40222 546 aa7.47□□□□□ -1.21
PGBD4-201ENST00000397766 AEBP1Q8IUX7 1158 aa7.47□□□□□ -1.21
PGBD4-201ENST00000397766 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.47□□□□□ -1.21
PGBD4-201ENST00000397766 R3HCC1Q9Y3T6 440 aaKnown RBP7.47□□□□□ -1.21
PGBD4-201ENST00000397766 CCT4P50991 539 aaKnown RBP7.47□□□□□ -1.21
PGBD4-201ENST00000397766 NAP1L1P55209 391 aaKnown RBP7.47□□□□□ -1.21
PGBD4-201ENST00000397766 DCTN1Q14203 1278 aa7.47□□□□□ -1.21
PGBD4-201ENST00000397766 ANKRD1Q15327 319 aa7.47□□□□□ -1.21
PGBD4-201ENST00000397766 MAP7D2Q96T17 732 aa7.47□□□□□ -1.21
PGBD4-201ENST00000397766 LNPKQ9C0E8 428 aa7.47□□□□□ -1.21
PGBD4-201ENST00000397766 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.47□□□□□ -1.21
PGBD4-201ENST00000397766 RPGRIP1LQ68CZ1 1315 aa7.47□□□□□ -1.21
PGBD4-201ENST00000397766 ZNF692Q9BU19 519 aaPredicted RBP7.46□□□□□ -1.21
PGBD4-201ENST00000397766 FILIP1LQ4L180 1135 aa7.46□□□□□ -1.21
PGBD4-201ENST00000397766 PDIA4P13667 645 aaKnown RBP7.46□□□□□ -1.22
PGBD4-201ENST00000397766 PROSER2Q86WR7 435 aaPredicted RBP7.46□□□□□ -1.22
PGBD4-201ENST00000397766 DACH1Q9UI36 760 aa7.46□□□□□ -1.22
PGBD4-201ENST00000397766 RAD54L2Q9Y4B4 1467 aa7.46□□□□□ -1.22
PGBD4-201ENST00000397766 HMOX1P09601 288 aa7.46□□□□□ -1.22
PGBD4-201ENST00000397766 PPP2R1AP30153 589 aa7.46□□□□□ -1.22
PGBD4-201ENST00000397766 JMYQ8N9B5 988 aa7.46□□□□□ -1.22
PGBD4-201ENST00000397766 GGNBP2Q9H3C7 697 aa7.46□□□□□ -1.22
PGBD4-201ENST00000397766 CCDC27Q2M243 656 aa7.46□□□□□ -1.22
PGBD4-201ENST00000397766 RRP12Q5JTH9 1297 aaKnown RBP7.46□□□□□ -1.22
PGBD4-201ENST00000397766 CABP2Q9NPB3 220 aa7.46□□□□□ -1.22
PGBD4-201ENST00000397766 GNAI2P04899 355 aa7.45□□□□□ -1.22
PGBD4-201ENST00000397766 NLRP6P59044 892 aa7.45□□□□□ -1.22
PGBD4-201ENST00000397766 CCDC158Q5M9N0 1113 aa7.45□□□□□ -1.22
PGBD4-201ENST00000397766 ZSCAN25Q6NSZ9 544 aa7.45□□□□□ -1.22
PGBD4-201ENST00000397766 MAGEC2Q9UBF1 373 aaPredicted RBP7.45□□□□□ -1.22
PGBD4-201ENST00000397766 TSPY26PQ9H489 355 aa7.45□□□□□ -1.22
PGBD4-201ENST00000397766 OFD1O75665 1012 aa7.45□□□□□ -1.22
PGBD4-201ENST00000397766 WDR63Q8IWG1 891 aa7.45□□□□□ -1.22
PGBD4-201ENST00000397766 KINO60870 393 aaKnown RBP7.45□□□□□ -1.22
PGBD4-201ENST00000397766 SDF4Q9BRK5 362 aa7.45□□□□□ -1.22
PGBD4-201ENST00000397766 SRCIN1Q9C0H9 1055 aa7.45□□□□□ -1.22
PGBD4-201ENST00000397766 KIAA1107Q9UPP5 1409 aa7.45□□□□□ -1.22
PGBD4-201ENST00000397766 TTC39AQ5SRH9 613 aa7.44□□□□□ -1.22
PGBD4-201ENST00000397766 CWC15Q9P013 229 aaKnown RBP7.44□□□□□ -1.22
PGBD4-201ENST00000397766 TATP17735 454 aaPredicted RBP7.44□□□□□ -1.22
PGBD4-201ENST00000397766 NASPP49321 788 aaPredicted RBP7.44□□□□□ -1.22
PGBD4-201ENST00000397766 AIMP1Q12904 312 aaKnown RBP7.44□□□□□ -1.22
PGBD4-201ENST00000397766 TWISTNBQ3B726 338 aaPredicted RBP7.44□□□□□ -1.22
PGBD4-201ENST00000397766 TCP11L2Q8N4U5 519 aa7.44□□□□□ -1.22
PGBD4-201ENST00000397766 PANK1Q8TE04 598 aa7.44□□□□□ -1.22
PGBD4-201ENST00000397766 CDK5RAP3Q96JB5 506 aa7.44□□□□□ -1.22
PGBD4-201ENST00000397766 CAGE1Q8TC20 777 aa7.44□□□□□ -1.22
PGBD4-201ENST00000397766 WWC2Q6AWC2 1192 aa7.44□□□□□ -1.22
PGBD4-201ENST00000397766 THEMISQ8N1K5 641 aaPredicted RBP7.44□□□□□ -1.22
PGBD4-201ENST00000397766 SURF6O75683 361 aaKnown RBP7.44□□□□□ -1.22
PGBD4-201ENST00000397766 HSP90AB2PQ58FF8 381 aa7.44□□□□□ -1.22
PGBD4-201ENST00000397766 NACAP1Q9BZK3 213 aa7.44□□□□□ -1.22
PGBD4-201ENST00000397766 HECW1Q76N89 1606 aa7.44□□□□□ -1.22
PGBD4-201ENST00000397766 MTHFSP49914 203 aa7.43□□□□□ -1.22
PGBD4-201ENST00000397766 KRI1Q8N9T8 703 aaKnown RBP7.43□□□□□ -1.22
PGBD4-201ENST00000397766 CNKSR2Q8WXI2 1034 aa7.43□□□□□ -1.22
PGBD4-201ENST00000397766 ZNF428Q96B54 188 aa7.43□□□□□ -1.22
PGBD4-201ENST00000397766 ADAMTS8Q9UP79 889 aa7.43□□□□□ -1.22
PGBD4-201ENST00000397766 SPG7Q9UQ90 795 aa7.43□□□□□ -1.22
PGBD4-201ENST00000397766 DAPK1P53355 1430 aa7.43□□□□□ -1.22
PGBD4-201ENST00000397766 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.43□□□□□ -1.22
PGBD4-201ENST00000397766 LUC7LQ9NQ29 371 aaKnown RBP7.43□□□□□ -1.22
PGBD4-201ENST00000397766 AQRO60306 1485 aaKnown RBP eCLIP7.43□□□□□ -1.22
PGBD4-201ENST00000397766 ANKLE2Q86XL3 938 aa7.43□□□□□ -1.22
PGBD4-201ENST00000397766 CCAR1Q8IX12 1150 aaKnown RBP7.43□□□□□ -1.22
PGBD4-201ENST00000397766 PDILTQ8N807 584 aa7.43□□□□□ -1.22
PGBD4-201ENST00000397766 ATAD2Q6PL18 1390 aa7.43□□□□□ -1.22
PGBD4-201ENST00000397766 C9orf84Q5VXU9 1444 aa7.43□□□□□ -1.22
PGBD4-201ENST00000397766 PRKAR2BP31323 418 aa7.42□□□□□ -1.22
PGBD4-201ENST00000397766 DNAJC2Q99543 621 aaKnown RBP7.42□□□□□ -1.22
PGBD4-201ENST00000397766 PRG4Q92954 1404 aaPredicted RBP7.42□□□□□ -1.22
PGBD4-201ENST00000397766 HMGN5P82970 282 aaKnown RBP7.42□□□□□ -1.22
PGBD4-201ENST00000397766 ZSCAN31Q96LW9 406 aaPredicted RBP7.42□□□□□ -1.22
PGBD4-201ENST00000397766 CYP46A1Q9Y6A2 500 aa7.42□□□□□ -1.22
PGBD4-201ENST00000397766 CDKL5O76039 1030 aa7.42□□□□□ -1.22
PGBD4-201ENST00000397766 ABTB2Q8N961 1025 aa7.42□□□□□ -1.22
PGBD4-201ENST00000397766 CBFA2T2O43439 604 aa7.42□□□□□ -1.22
PGBD4-201ENST00000397766 NFKBIBQ15653 356 aa7.42□□□□□ -1.22
PGBD4-201ENST00000397766 SLC52A1Q9NWF4 448 aa7.42□□□□□ -1.22
PGBD4-201ENST00000397766 FYB1O15117 783 aa7.42□□□□□ -1.22
PGBD4-201ENST00000397766 STK38Q15208 465 aa7.42□□□□□ -1.22
PGBD4-201ENST00000397766 TRIM22Q8IYM9 498 aa7.42□□□□□ -1.22
PGBD4-201ENST00000397766 LRRCC1Q9C099 1032 aa7.42□□□□□ -1.22
PGBD4-201ENST00000397766 ZNF644Q9H582 1327 aaPredicted RBP7.42□□□□□ -1.22
PGBD4-201ENST00000397766 EXOSC9Q06265 439 aaKnown RBP7.42□□□□□ -1.22
PGBD4-201ENST00000397766 ZNHIT6Q9NWK9 470 aaKnown RBP7.42□□□□□ -1.22
PGBD4-201ENST00000397766 PDZRN3Q9UPQ7 1066 aa7.42□□□□□ -1.22
PGBD4-201ENST00000397766 HMGXB3Q12766 1538 aa7.41□□□□□ -1.22
PGBD4-201ENST00000397766 STIM1Q13586 685 aa7.41□□□□□ -1.22
PGBD4-201ENST00000397766 SYCP1Q15431 976 aa7.41□□□□□ -1.22
PGBD4-201ENST00000397766 TRIM5Q9C035 493 aa7.41□□□□□ -1.22
PGBD4-201ENST00000397766 WDR33Q9C0J8 1336 aaKnown RBP7.41□□□□□ -1.22
PGBD4-201ENST00000397766 ERLIN2O94905 339 aa7.41□□□□□ -1.22
PGBD4-201ENST00000397766 FOSBP53539 338 aa7.41□□□□□ -1.22
PGBD4-201ENST00000397766 NOL7Q9UMY1 257 aaKnown RBP7.41□□□□□ -1.22
PGBD4-201ENST00000397766 ANKRD30BQ9BXX2 1392 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms