RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 ADAMTS2O95450 1211 aa29.62■■■□□ 2.33
TSPAN4-206ENST00000397408 CDCA8Q53HL2 280 aa29.62■■■□□ 2.33
TSPAN4-206ENST00000397408 SLC12A5Q9H2X9 1139 aa29.62■■■□□ 2.33
TSPAN4-206ENST00000397408 CD163L1Q9NR16 1453 aa29.61■■■□□ 2.33
TSPAN4-206ENST00000397408 BRD4O60885 1362 aaPredicted RBP29.6■■■□□ 2.33
TSPAN4-206ENST00000397408 NINLQ9Y2I6 1382 aa29.6■■■□□ 2.33
TSPAN4-206ENST00000397408 ABCA3Q99758 1704 aa29.6■■■□□ 2.33
TSPAN4-206ENST00000397408 CABLES1Q8TDN4 633 aa29.59■■■□□ 2.33
TSPAN4-206ENST00000397408 ZNF692Q9BU19 519 aaPredicted RBP29.59■■■□□ 2.33
TSPAN4-206ENST00000397408 KTN1Q86UP2 1357 aaKnown RBP29.59■■■□□ 2.33
TSPAN4-206ENST00000397408 MON2Q7Z3U7 1717 aa29.58■■■□□ 2.33
TSPAN4-206ENST00000397408 SSH2Q76I76 1423 aa29.57■■■□□ 2.32
TSPAN4-206ENST00000397408 HAP1P54257 671 aaPredicted RBP29.57■■■□□ 2.32
TSPAN4-206ENST00000397408 NRKQ7Z2Y5 1582 aa29.57■■■□□ 2.32
TSPAN4-206ENST00000397408 NUTM2GQ5VZR2 741 aa29.55■■■□□ 2.32
TSPAN4-206ENST00000397408 HDGFL2Q7Z4V5 671 aaPredicted RBP29.55■■■□□ 2.32
TSPAN4-206ENST00000397408 ABTB2Q8N961 1025 aa29.55■■■□□ 2.32
TSPAN4-206ENST00000397408 C8orf37Q96NL8 207 aa29.55■■■□□ 2.32
TSPAN4-206ENST00000397408 A0A1W2PP64 1363 aa29.55■■■□□ 2.32
TSPAN4-206ENST00000397408 TERF2IPQ9NYB0 399 aa29.54■■■□□ 2.32
TSPAN4-206ENST00000397408 CRYBG1Q9Y4K1 1723 aa29.54■■■□□ 2.32
TSPAN4-206ENST00000397408 MARF1Q9Y4F3 1742 aaKnown RBP29.53■■■□□ 2.32
TSPAN4-206ENST00000397408 RGS17Q9UGC6 210 aaPredicted RBP29.53■■■□□ 2.32
TSPAN4-206ENST00000397408 TTC21BQ7Z4L5 1316 aa29.52■■■□□ 2.32
TSPAN4-206ENST00000397408 PIK3C2AO00443 1686 aa29.51■■■□□ 2.31
TSPAN4-206ENST00000397408 MYOM1P52179 1685 aa29.51■■■□□ 2.31
TSPAN4-206ENST00000397408 PHRF1Q9P1Y6 1649 aaKnown RBP29.5■■■□□ 2.31
TSPAN4-206ENST00000397408 AFF2P51816 1311 aa29.5■■■□□ 2.31
TSPAN4-206ENST00000397408 NGLY1Q96IV0 654 aa29.49■■■□□ 2.31
TSPAN4-206ENST00000397408 POLR3GLQ9BT43 218 aa29.49■■■□□ 2.31
TSPAN4-206ENST00000397408 TTC21AQ8NDW8 1320 aa29.49■■■□□ 2.31
TSPAN4-206ENST00000397408 ANKRD36BQ8N2N9 1353 aa29.49■■■□□ 2.31
TSPAN4-206ENST00000397408 EDC4Q6P2E9 1401 aaKnown RBP29.48■■■□□ 2.31
TSPAN4-206ENST00000397408 NLRP13Q86W25 1043 aa29.46■■■□□ 2.31
TSPAN4-206ENST00000397408 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.46■■■□□ 2.31
TSPAN4-206ENST00000397408 USP19O94966 1318 aa29.46■■■□□ 2.31
TSPAN4-206ENST00000397408 NLRP6P59044 892 aa29.45■■■□□ 2.31
TSPAN4-206ENST00000397408 ZNF772Q68DY9 489 aaPredicted RBP29.44■■■□□ 2.3
TSPAN4-206ENST00000397408 C11orf95C9JLR9 678 aaPredicted RBP29.42■■■□□ 2.3
TSPAN4-206ENST00000397408 POTEAQ6S8J7 498 aa29.41■■■□□ 2.3
TSPAN4-206ENST00000397408 NME9Q86XW9 330 aa29.4■■■□□ 2.3
TSPAN4-206ENST00000397408 FNBP4Q8N3X1 1017 aaPredicted RBP29.4■■■□□ 2.3
TSPAN4-206ENST00000397408 SLIT3O75094 1523 aa29.4■■■□□ 2.3
TSPAN4-206ENST00000397408 USP21Q9UK80 565 aa29.38■■■□□ 2.29
TSPAN4-206ENST00000397408 PLCH1Q4KWH8 1693 aa29.38■■■□□ 2.29
TSPAN4-206ENST00000397408 SLIT2O94813 1529 aa29.38■■■□□ 2.29
TSPAN4-206ENST00000397408 KIAA0232Q92628 1395 aa29.37■■■□□ 2.29
TSPAN4-206ENST00000397408 FAM83GA6ND36 823 aa29.37■■■□□ 2.29
TSPAN4-206ENST00000397408 GCP02774 474 aa29.37■■■□□ 2.29
TSPAN4-206ENST00000397408 PRDM11Q9NQV5 511 aa29.37■■■□□ 2.29
TSPAN4-206ENST00000397408 ZRANB1Q9UGI0 708 aa29.37■■■□□ 2.29
TSPAN4-206ENST00000397408 USP54Q70EL1 1684 aa29.36■■■□□ 2.29
TSPAN4-206ENST00000397408 KIF7Q2M1P5 1343 aa29.36■■■□□ 2.29
TSPAN4-206ENST00000397408 COL14A1Q05707 1796 aaKnown RBP29.36■■■□□ 2.29
TSPAN4-206ENST00000397408 ZC3H6P61129 1189 aaKnown RBP29.36■■■□□ 2.29
TSPAN4-206ENST00000397408 USP31Q70CQ4 1352 aa29.35■■■□□ 2.29
TSPAN4-206ENST00000397408 BCL9LQ86UU0 1499 aa29.34■■■□□ 2.29
TSPAN4-206ENST00000397408 ILDR2Q71H61 639 aa29.34■■■□□ 2.29
TSPAN4-206ENST00000397408 NWD2Q9ULI1 1742 aa29.33■■■□□ 2.29
TSPAN4-206ENST00000397408 NSD3Q9BZ95 1437 aa29.32■■■□□ 2.28
TSPAN4-206ENST00000397408 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.32■■■□□ 2.28
TSPAN4-206ENST00000397408 CPDO75976 1380 aa29.32■■■□□ 2.28
TSPAN4-206ENST00000397408 OVOS2A0A0J9YW53 1432 aa29.32■■■□□ 2.28
TSPAN4-206ENST00000397408 OVOS2Q6IE36 1432 aa29.32■■■□□ 2.28
TSPAN4-206ENST00000397408 CHRNA2Q15822 529 aa29.31■■■□□ 2.28
TSPAN4-206ENST00000397408 CARD14Q9BXL6 1004 aa29.31■■■□□ 2.28
TSPAN4-206ENST00000397408 SOX12O15370 315 aa29.3■■■□□ 2.28
TSPAN4-206ENST00000397408 ZEB1P37275 1124 aaPredicted RBP29.3■■■□□ 2.28
TSPAN4-206ENST00000397408 QTRT2Q9H974 415 aaKnown RBP29.3■■■□□ 2.28
TSPAN4-206ENST00000397408 UNC5CLQ8IV45 518 aa29.29■■■□□ 2.28
TSPAN4-206ENST00000397408 TRPC5Q9UL62 973 aaPredicted RBP29.29■■■□□ 2.28
TSPAN4-206ENST00000397408 KCNH5Q8NCM2 988 aa29.28■■■□□ 2.28
TSPAN4-206ENST00000397408 ATRNO75882 1429 aa29.28■■■□□ 2.28
TSPAN4-206ENST00000397408 NFAT5O94916 1531 aa29.28■■■□□ 2.28
TSPAN4-206ENST00000397408 BTG4Q9NY30 223 aa29.28■■■□□ 2.28
TSPAN4-206ENST00000397408 NRAPQ86VF7 1730 aa29.27■■■□□ 2.28
TSPAN4-206ENST00000397408 KIF20BQ96Q89 1820 aa29.27■■■□□ 2.28
TSPAN4-206ENST00000397408 CCDC7Q96M83 1385 aa29.26■■■□□ 2.27
TSPAN4-206ENST00000397408 ZBTB7CA1YPR0 619 aa29.26■■■□□ 2.27
TSPAN4-206ENST00000397408 COG3Q96JB2 828 aa29.25■■■□□ 2.27
TSPAN4-206ENST00000397408 PANK3Q9H999 370 aa29.25■■■□□ 2.27
TSPAN4-206ENST00000397408 FYB1O15117 783 aa29.24■■■□□ 2.27
TSPAN4-206ENST00000397408 WASHC2AQ641Q2 1341 aa29.24■■■□□ 2.27
TSPAN4-206ENST00000397408 LMO7Q8WWI1 1683 aa29.24■■■□□ 2.27
TSPAN4-206ENST00000397408 RXRBP28702 533 aa29.23■■■□□ 2.27
TSPAN4-206ENST00000397408 GGNBP2Q9H3C7 697 aa29.23■■■□□ 2.27
TSPAN4-206ENST00000397408 RBM6P78332 1123 aaKnown RBP29.21■■■□□ 2.27
TSPAN4-206ENST00000397408 ARHGEF25Q86VW2 580 aa29.2■■■□□ 2.27
TSPAN4-206ENST00000397408 CAMTA1Q9Y6Y1 1673 aa29.2■■■□□ 2.27
TSPAN4-206ENST00000397408 AATKQ6ZMQ8 1374 aa29.2■■■□□ 2.26
TSPAN4-206ENST00000397408 CGNL1Q0VF96 1302 aa29.2■■■□□ 2.26
TSPAN4-206ENST00000397408 VPS72Q15906 364 aa29.19■■■□□ 2.26
TSPAN4-206ENST00000397408 COL18A1P39060 1754 aa29.17■■■□□ 2.26
TSPAN4-206ENST00000397408 GJD4Q96KN9 370 aaPredicted RBP29.17■■■□□ 2.26
TSPAN4-206ENST00000397408 STRN4Q9NRL3 753 aa29.17■■■□□ 2.26
TSPAN4-206ENST00000397408 CCDC9Q9Y3X0 531 aaKnown RBP29.17■■■□□ 2.26
TSPAN4-206ENST00000397408 GLI3P10071 1580 aa29.16■■■□□ 2.26
TSPAN4-206ENST00000397408 LTN1O94822 1766 aa29.16■■■□□ 2.26
TSPAN4-206ENST00000397408 COL5A2P05997 1499 aaPredicted RBP29.14■■■□□ 2.26
TSPAN4-206ENST00000397408 CDK12Q9NYV4 1490 aaPredicted RBP29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms