RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 C11orf95C9JLR9 678 aaPredicted RBP26.69■■□□□ 1.86
HOXA9-202ENST00000396345 PHF23Q9BUL5 403 aaPredicted RBP26.69■■□□□ 1.86
HOXA9-202ENST00000396345 BRD4O60885 1362 aaPredicted RBP26.69■■□□□ 1.86
HOXA9-202ENST00000396345 KTN1Q86UP2 1357 aaKnown RBP26.69■■□□□ 1.86
HOXA9-202ENST00000396345 CD163L1Q9NR16 1453 aa26.68■■□□□ 1.86
HOXA9-202ENST00000396345 ARHGEF10O15013 1369 aa26.68■■□□□ 1.86
HOXA9-202ENST00000396345 ALS2Q96Q42 1657 aa26.66■■□□□ 1.86
HOXA9-202ENST00000396345 COL22A1Q8NFW1 1626 aaPredicted RBP26.66■■□□□ 1.86
HOXA9-202ENST00000396345 A0A1W2PP64 1363 aa26.65■■□□□ 1.86
HOXA9-202ENST00000396345 MON2Q7Z3U7 1717 aa26.65■■□□□ 1.86
HOXA9-202ENST00000396345 MYOM1P52179 1685 aa26.64■■□□□ 1.86
HOXA9-202ENST00000396345 NUTM2BA6NNL0 878 aaPredicted RBP26.64■■□□□ 1.86
HOXA9-202ENST00000396345 NUTM2EB1AL46 878 aaPredicted RBP26.64■■□□□ 1.86
HOXA9-202ENST00000396345 NUTM2AQ8IVF1 878 aaPredicted RBP26.64■■□□□ 1.86
HOXA9-202ENST00000396345 SSH2Q76I76 1423 aa26.64■■□□□ 1.85
HOXA9-202ENST00000396345 ANKRD36BQ8N2N9 1353 aa26.62■■□□□ 1.85
HOXA9-202ENST00000396345 ABTB2Q8N961 1025 aa26.62■■□□□ 1.85
HOXA9-202ENST00000396345 KIF7Q2M1P5 1343 aa26.62■■□□□ 1.85
HOXA9-202ENST00000396345 TTC21BQ7Z4L5 1316 aa26.62■■□□□ 1.85
HOXA9-202ENST00000396345 PLEKHG5O94827 1062 aa26.61■■□□□ 1.85
HOXA9-202ENST00000396345 NRKQ7Z2Y5 1582 aa26.59■■□□□ 1.85
HOXA9-202ENST00000396345 EDC4Q6P2E9 1401 aaKnown RBP26.59■■□□□ 1.85
HOXA9-202ENST00000396345 NUTM2GQ5VZR2 741 aa26.59■■□□□ 1.85
HOXA9-202ENST00000396345 TTC21AQ8NDW8 1320 aa26.59■■□□□ 1.85
HOXA9-202ENST00000396345 LRP6O75581 1613 aa26.58■■□□□ 1.85
HOXA9-202ENST00000396345 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.58■■□□□ 1.85
HOXA9-202ENST00000396345 CABLES1Q8TDN4 633 aa26.58■■□□□ 1.85
HOXA9-202ENST00000396345 HAP1P54257 671 aaPredicted RBP26.56■■□□□ 1.84
HOXA9-202ENST00000396345 MEX3CQ5U5Q3 659 aaKnown RBP26.56■■□□□ 1.84
HOXA9-202ENST00000396345 CCDC7Q96M83 1385 aa26.55■■□□□ 1.84
HOXA9-202ENST00000396345 PIK3C2AO00443 1686 aa26.54■■□□□ 1.84
HOXA9-202ENST00000396345 NLRP13Q86W25 1043 aa26.54■■□□□ 1.84
HOXA9-202ENST00000396345 ADAMTS2O95450 1211 aa26.53■■□□□ 1.84
HOXA9-202ENST00000396345 NLRP6P59044 892 aa26.53■■□□□ 1.84
HOXA9-202ENST00000396345 WASHC2AQ641Q2 1341 aa26.53■■□□□ 1.84
HOXA9-202ENST00000396345 ABCA3Q99758 1704 aa26.53■■□□□ 1.84
HOXA9-202ENST00000396345 CRYBG1Q9Y4K1 1723 aa26.51■■□□□ 1.83
HOXA9-202ENST00000396345 NME9Q86XW9 330 aa26.5■■□□□ 1.83
HOXA9-202ENST00000396345 CARD14Q9BXL6 1004 aa26.5■■□□□ 1.83
HOXA9-202ENST00000396345 PANK3Q9H999 370 aa26.5■■□□□ 1.83
HOXA9-202ENST00000396345 USP19O94966 1318 aa26.49■■□□□ 1.83
HOXA9-202ENST00000396345 PHRF1Q9P1Y6 1649 aaKnown RBP26.48■■□□□ 1.83
HOXA9-202ENST00000396345 ZRANB1Q9UGI0 708 aa26.48■■□□□ 1.83
HOXA9-202ENST00000396345 NSD3Q9BZ95 1437 aa26.48■■□□□ 1.83
HOXA9-202ENST00000396345 MARF1Q9Y4F3 1742 aaKnown RBP26.47■■□□□ 1.83
HOXA9-202ENST00000396345 USP31Q70CQ4 1352 aa26.46■■□□□ 1.83
HOXA9-202ENST00000396345 C8orf37Q96NL8 207 aa26.46■■□□□ 1.83
HOXA9-202ENST00000396345 RGS17Q9UGC6 210 aaPredicted RBP26.46■■□□□ 1.83
HOXA9-202ENST00000396345 NGLY1Q96IV0 654 aa26.44■■□□□ 1.82
HOXA9-202ENST00000396345 GCP02774 474 aa26.43■■□□□ 1.82
HOXA9-202ENST00000396345 USP54Q70EL1 1684 aa26.43■■□□□ 1.82
HOXA9-202ENST00000396345 SLIT3O75094 1523 aa26.43■■□□□ 1.82
HOXA9-202ENST00000396345 FYB1O15117 783 aa26.42■■□□□ 1.82
HOXA9-202ENST00000396345 ZC3H6P61129 1189 aaKnown RBP26.41■■□□□ 1.82
HOXA9-202ENST00000396345 KIF20BQ96Q89 1820 aa26.4■■□□□ 1.82
HOXA9-202ENST00000396345 KCNH5Q8NCM2 988 aa26.4■■□□□ 1.82
HOXA9-202ENST00000396345 COG3Q96JB2 828 aa26.4■■□□□ 1.82
HOXA9-202ENST00000396345 CGNL1Q0VF96 1302 aa26.39■■□□□ 1.82
HOXA9-202ENST00000396345 OVOS2A0A0J9YW53 1432 aa26.39■■□□□ 1.82
HOXA9-202ENST00000396345 OVOS2Q6IE36 1432 aa26.39■■□□□ 1.82
HOXA9-202ENST00000396345 GGNBP2Q9H3C7 697 aa26.39■■□□□ 1.82
HOXA9-202ENST00000396345 AFF2P51816 1311 aa26.39■■□□□ 1.81
HOXA9-202ENST00000396345 KIAA0232Q92628 1395 aa26.38■■□□□ 1.81
HOXA9-202ENST00000396345 FAM83GA6ND36 823 aa26.38■■□□□ 1.81
HOXA9-202ENST00000396345 SOX12O15370 315 aa26.38■■□□□ 1.81
HOXA9-202ENST00000396345 PRDM11Q9NQV5 511 aa26.38■■□□□ 1.81
HOXA9-202ENST00000396345 KNSTRNQ9Y448 316 aa26.37■■□□□ 1.81
HOXA9-202ENST00000396345 FNBP4Q8N3X1 1017 aaPredicted RBP26.36■■□□□ 1.81
HOXA9-202ENST00000396345 CPDO75976 1380 aa26.35■■□□□ 1.81
HOXA9-202ENST00000396345 COL14A1Q05707 1796 aaKnown RBP26.35■■□□□ 1.81
HOXA9-202ENST00000396345 ZNF772Q68DY9 489 aaPredicted RBP26.34■■□□□ 1.81
HOXA9-202ENST00000396345 NFAT5O94916 1531 aa26.34■■□□□ 1.81
HOXA9-202ENST00000396345 ZBTB7CA1YPR0 619 aa26.33■■□□□ 1.81
HOXA9-202ENST00000396345 CHRNA2Q15822 529 aa26.33■■□□□ 1.81
HOXA9-202ENST00000396345 USP21Q9UK80 565 aa26.33■■□□□ 1.81
HOXA9-202ENST00000396345 PLCH1Q4KWH8 1693 aa26.32■■□□□ 1.8
HOXA9-202ENST00000396345 POTEAQ6S8J7 498 aa26.32■■□□□ 1.8
HOXA9-202ENST00000396345 SLIT2O94813 1529 aa26.32■■□□□ 1.8
HOXA9-202ENST00000396345 PER1O15534 1290 aaPredicted RBP26.31■■□□□ 1.8
HOXA9-202ENST00000396345 ARHGEF25Q86VW2 580 aa26.3■■□□□ 1.8
HOXA9-202ENST00000396345 BTG4Q9NY30 223 aa26.3■■□□□ 1.8
HOXA9-202ENST00000396345 NWD2Q9ULI1 1742 aa26.29■■□□□ 1.8
HOXA9-202ENST00000396345 BCL9LQ86UU0 1499 aa26.29■■□□□ 1.8
HOXA9-202ENST00000396345 UNC5CLQ8IV45 518 aa26.28■■□□□ 1.8
HOXA9-202ENST00000396345 NSD2O96028 1365 aa26.28■■□□□ 1.8
HOXA9-202ENST00000396345 AMER1Q5JTC6 1135 aaPredicted RBP26.27■■□□□ 1.8
HOXA9-202ENST00000396345 ANKRD26Q9UPS8 1709 aa26.27■■□□□ 1.8
HOXA9-202ENST00000396345 AATKQ6ZMQ8 1374 aa26.26■■□□□ 1.79
HOXA9-202ENST00000396345 QTRT2Q9H974 415 aaKnown RBP26.26■■□□□ 1.79
HOXA9-202ENST00000396345 ZNF316A6NFI3 1004 aaPredicted RBP26.25■■□□□ 1.79
HOXA9-202ENST00000396345 FBLN1P23142 703 aa26.25■■□□□ 1.79
HOXA9-202ENST00000396345 LTN1O94822 1766 aa26.25■■□□□ 1.79
HOXA9-202ENST00000396345 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.25■■□□□ 1.79
HOXA9-202ENST00000396345 LMO7Q8WWI1 1683 aa26.24■■□□□ 1.79
HOXA9-202ENST00000396345 TRPC5Q9UL62 973 aaPredicted RBP26.23■■□□□ 1.79
HOXA9-202ENST00000396345 COL18A1P39060 1754 aa26.23■■□□□ 1.79
HOXA9-202ENST00000396345 NRAPQ86VF7 1730 aa26.22■■□□□ 1.79
HOXA9-202ENST00000396345 CAMTA1Q9Y6Y1 1673 aa26.22■■□□□ 1.79
HOXA9-202ENST00000396345 DDX10Q13206 875 aaKnown RBP26.22■■□□□ 1.79
HOXA9-202ENST00000396345 MORC1Q86VD1 984 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms