RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 VPS72Q15906 364 aa23.37■■□□□ 1.33
CXCL12-206ENST00000395795 NRAPQ86VF7 1730 aa23.36■■□□□ 1.33
CXCL12-206ENST00000395795 ACEP12821 1306 aa23.36■■□□□ 1.33
CXCL12-206ENST00000395795 NEUROD1Q13562 356 aa23.36■■□□□ 1.33
CXCL12-206ENST00000395795 NBPF8Q3BBV2 869 aa23.36■■□□□ 1.33
CXCL12-206ENST00000395795 ATAD2Q6PL18 1390 aa23.35■■□□□ 1.33
CXCL12-206ENST00000395795 HAP1P54257 671 aaPredicted RBP23.34■■□□□ 1.33
CXCL12-206ENST00000395795 QRICH2Q9H0J4 1663 aa23.34■■□□□ 1.33
CXCL12-206ENST00000395795 ONECUT3O60422 494 aaPredicted RBP23.33■■□□□ 1.33
CXCL12-206ENST00000395795 CABP2Q9NPB3 220 aa23.32■■□□□ 1.32
CXCL12-206ENST00000395795 COL14A1Q05707 1796 aaKnown RBP23.31■■□□□ 1.32
CXCL12-206ENST00000395795 PAK3O75914 559 aaPredicted RBP23.3■■□□□ 1.32
CXCL12-206ENST00000395795 BRWD3Q6RI45 1802 aa23.3■■□□□ 1.32
CXCL12-206ENST00000395795 PHRF1Q9P1Y6 1649 aaKnown RBP23.3■■□□□ 1.32
CXCL12-206ENST00000395795 PPIP5K1Q6PFW1 1433 aa23.29■■□□□ 1.32
CXCL12-206ENST00000395795 EP400Q96L91 3159 aa23.28■■□□□ 1.32
CXCL12-206ENST00000395795 BTG4Q9NY30 223 aa23.28■■□□□ 1.32
CXCL12-206ENST00000395795 SRPK2P78362 688 aaKnown RBP23.27■■□□□ 1.32
CXCL12-206ENST00000395795 SEPT12Q8IYM1 358 aa23.27■■□□□ 1.32
CXCL12-206ENST00000395795 ROCK2O75116 1388 aaKnown RBP23.27■■□□□ 1.31
CXCL12-206ENST00000395795 NUTM2GQ5VZR2 741 aa23.26■■□□□ 1.31
CXCL12-206ENST00000395795 USP19O94966 1318 aa23.26■■□□□ 1.31
CXCL12-206ENST00000395795 KIAA0232Q92628 1395 aa23.26■■□□□ 1.31
CXCL12-206ENST00000395795 SSH2Q76I76 1423 aa23.25■■□□□ 1.31
CXCL12-206ENST00000395795 NRKQ7Z2Y5 1582 aa23.24■■□□□ 1.31
CXCL12-206ENST00000395795 CABP1Q9NZU7 370 aa23.23■■□□□ 1.31
CXCL12-206ENST00000395795 PRDM11Q9NQV5 511 aa23.22■■□□□ 1.31
CXCL12-206ENST00000395795 SPATA31A5Q5VU36 1347 aa23.22■■□□□ 1.31
CXCL12-206ENST00000395795 SPATA31A7Q8IWB4 1347 aa23.22■■□□□ 1.31
CXCL12-206ENST00000395795 USP6P35125 1406 aa23.22■■□□□ 1.31
CXCL12-206ENST00000395795 CHRNA2Q15822 529 aa23.21■■□□□ 1.31
CXCL12-206ENST00000395795 TRIM26Q12899 539 aaPredicted RBP23.2■■□□□ 1.3
CXCL12-206ENST00000395795 BRD4O60885 1362 aaPredicted RBP23.19■■□□□ 1.3
CXCL12-206ENST00000395795 EVC2Q86UK5 1308 aa23.19■■□□□ 1.3
CXCL12-206ENST00000395795 ZC3H6P61129 1189 aaKnown RBP23.19■■□□□ 1.3
CXCL12-206ENST00000395795 ABTB2Q8N961 1025 aa23.19■■□□□ 1.3
CXCL12-206ENST00000395795 CCDC9Q9Y3X0 531 aaKnown RBP23.19■■□□□ 1.3
CXCL12-206ENST00000395795 LMO7Q8WWI1 1683 aa23.19■■□□□ 1.3
CXCL12-206ENST00000395795 CPDO75976 1380 aa23.18■■□□□ 1.3
CXCL12-206ENST00000395795 FAM98CQ17RN3 349 aaKnown RBP23.18■■□□□ 1.3
CXCL12-206ENST00000395795 THSD7AQ9UPZ6 1657 aa23.18■■□□□ 1.3
CXCL12-206ENST00000395795 CAMTA1Q9Y6Y1 1673 aa23.18■■□□□ 1.3
CXCL12-206ENST00000395795 SBNO2Q9Y2G9 1366 aa23.17■■□□□ 1.3
CXCL12-206ENST00000395795 CCDC125Q86Z20 511 aa23.16■■□□□ 1.3
CXCL12-206ENST00000395795 BLMP54132 1417 aaPredicted RBP23.16■■□□□ 1.3
CXCL12-206ENST00000395795 SPATA31A1Q5TZJ5 1347 aa23.15■■□□□ 1.3
CXCL12-206ENST00000395795 KRT27Q7Z3Y8 459 aa23.15■■□□□ 1.3
CXCL12-206ENST00000395795 CPSF1Q10570 1443 aaKnown RBP23.15■■□□□ 1.3
CXCL12-206ENST00000395795 SLIT3O75094 1523 aa23.14■■□□□ 1.3
CXCL12-206ENST00000395795 PIK3C2AO00443 1686 aa23.14■■□□□ 1.29
CXCL12-206ENST00000395795 GCP02774 474 aa23.14■■□□□ 1.29
CXCL12-206ENST00000395795 NLRP13Q86W25 1043 aa23.13■■□□□ 1.29
CXCL12-206ENST00000395795 TONSLQ96HA7 1378 aa23.12■■□□□ 1.29
CXCL12-206ENST00000395795 AKAP12Q02952 1782 aa23.12■■□□□ 1.29
CXCL12-206ENST00000395795 CARD11Q9BXL7 1154 aa23.11■■□□□ 1.29
CXCL12-206ENST00000395795 CD163L1Q9NR16 1453 aa23.1■■□□□ 1.29
CXCL12-206ENST00000395795 TTC21BQ7Z4L5 1316 aa23.08■■□□□ 1.29
CXCL12-206ENST00000395795 LARP1Q6PKG0 1096 aaKnown RBP23.08■■□□□ 1.29
CXCL12-206ENST00000395795 DEFB132Q7Z7B7 95 aa23.08■■□□□ 1.29
CXCL12-206ENST00000395795 STRN4Q9NRL3 753 aa23.08■■□□□ 1.29
CXCL12-206ENST00000395795 COL18A1P39060 1754 aa23.07■■□□□ 1.28
CXCL12-206ENST00000395795 NLRP6P59044 892 aa23.07■■□□□ 1.28
CXCL12-206ENST00000395795 FAM182BQ5T319 152 aa23.07■■□□□ 1.28
CXCL12-206ENST00000395795 COL5A2P05997 1499 aaPredicted RBP23.06■■□□□ 1.28
CXCL12-206ENST00000395795 ZNF692Q9BU19 519 aaPredicted RBP23.06■■□□□ 1.28
CXCL12-206ENST00000395795 TESK2Q96S53 571 aa23.05■■□□□ 1.28
CXCL12-206ENST00000395795 AATKQ6ZMQ8 1374 aa23.04■■□□□ 1.28
CXCL12-206ENST00000395795 BARGINQ6ZT62 677 aa23.04■■□□□ 1.28
CXCL12-206ENST00000395795 MON2Q7Z3U7 1717 aa23.04■■□□□ 1.28
CXCL12-206ENST00000395795 A0A0G2JS52 829 aa23.02■■□□□ 1.28
CXCL12-206ENST00000395795 MYT1Q01538 1121 aa23.02■■□□□ 1.28
CXCL12-206ENST00000395795 AXIN2Q9Y2T1 843 aa23.01■■□□□ 1.27
CXCL12-206ENST00000395795 NFAT5O94916 1531 aa23.01■■□□□ 1.27
CXCL12-206ENST00000395795 TTC21AQ8NDW8 1320 aa23.01■■□□□ 1.27
CXCL12-206ENST00000395795 KTN1Q86UP2 1357 aaKnown RBP23.01■■□□□ 1.27
CXCL12-206ENST00000395795 ARHGEF25Q86VW2 580 aa23■■□□□ 1.27
CXCL12-206ENST00000395795 ZRANB1Q9UGI0 708 aa23■■□□□ 1.27
CXCL12-206ENST00000395795 EVA1CP58658 441 aa22.99■■□□□ 1.27
CXCL12-206ENST00000395795 SLC12A5Q9H2X9 1139 aa22.99■■□□□ 1.27
CXCL12-206ENST00000395795 USP35Q9P2H5 1018 aa22.99■■□□□ 1.27
CXCL12-206ENST00000395795 USP54Q70EL1 1684 aa22.98■■□□□ 1.27
CXCL12-206ENST00000395795 TCP11L2Q8N4U5 519 aa22.98■■□□□ 1.27
CXCL12-206ENST00000395795 PUS7Q96PZ0 661 aaKnown RBP22.98■■□□□ 1.27
CXCL12-206ENST00000395795 USP31Q70CQ4 1352 aa22.98■■□□□ 1.27
CXCL12-206ENST00000395795 TNS1Q9HBL0 1735 aaKnown RBP22.97■■□□□ 1.27
CXCL12-206ENST00000395795 CRB1P82279 1406 aa22.97■■□□□ 1.27
CXCL12-206ENST00000395795 ST20-MTHFSA0A0A6YYL1 179 aa22.96■■□□□ 1.27
CXCL12-206ENST00000395795 DISP2A7MBM2 1401 aa22.96■■□□□ 1.27
CXCL12-206ENST00000395795 RGPD1P0DJD0 1748 aa22.94■■□□□ 1.26
CXCL12-206ENST00000395795 NME9Q86XW9 330 aa22.94■■□□□ 1.26
CXCL12-206ENST00000395795 THRAP3Q9Y2W1 955 aaKnown RBP22.94■■□□□ 1.26
CXCL12-206ENST00000395795 PARP4Q9UKK3 1724 aaKnown RBP22.94■■□□□ 1.26
CXCL12-206ENST00000395795 A0A1W2PP64 1363 aa22.93■■□□□ 1.26
CXCL12-206ENST00000395795 SF3B2Q13435 895 aaKnown RBP22.93■■□□□ 1.26
CXCL12-206ENST00000395795 SRCAPQ6ZRS2 3230 aa22.93■■□□□ 1.26
CXCL12-206ENST00000395795 ZBTB7CA1YPR0 619 aa22.92■■□□□ 1.26
CXCL12-206ENST00000395795 KCNH5Q8NCM2 988 aa22.92■■□□□ 1.26
CXCL12-206ENST00000395795 RGPD5Q99666 1765 aa22.91■■□□□ 1.26
CXCL12-206ENST00000395795 EN1Q05925 392 aaPredicted RBP22.91■■□□□ 1.26
CXCL12-206ENST00000395795 FAM196AQ6ZSG2 479 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms