RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 NUTM2EB1AL46 878 aaPredicted RBP9.23□□□□□ -0.93
SMARCAD1-203ENST00000394961 NUTM2AQ8IVF1 878 aaPredicted RBP9.23□□□□□ -0.93
SMARCAD1-203ENST00000394961 DDX17Q92841 729 aaKnown RBP9.23□□□□□ -0.93
SMARCAD1-203ENST00000394961 WAPLQ7Z5K2 1190 aa9.23□□□□□ -0.93
SMARCAD1-203ENST00000394961 LRRC37A3O60309 1634 aa9.22□□□□□ -0.93
SMARCAD1-203ENST00000394961 SSH2Q76I76 1423 aa9.22□□□□□ -0.93
SMARCAD1-203ENST00000394961 USP19O94966 1318 aa9.22□□□□□ -0.93
SMARCAD1-203ENST00000394961 SBNO2Q9Y2G9 1366 aa9.21□□□□□ -0.93
SMARCAD1-203ENST00000394961 PLEKHG3A1L390 1219 aa9.21□□□□□ -0.94
SMARCAD1-203ENST00000394961 WASLO00401 505 aaPredicted RBP9.21□□□□□ -0.94
SMARCAD1-203ENST00000394961 CFAP70Q5T0N1 1121 aa9.21□□□□□ -0.94
SMARCAD1-203ENST00000394961 GPRASP1Q5JY77 1395 aa9.21□□□□□ -0.94
SMARCAD1-203ENST00000394961 CASZ1Q86V15 1759 aa9.21□□□□□ -0.94
SMARCAD1-203ENST00000394961 PRR36Q9H6K5 1346 aa9.2□□□□□ -0.94
SMARCAD1-203ENST00000394961 PRAM1Q96QH2 718 aa9.2□□□□□ -0.94
SMARCAD1-203ENST00000394961 SENP3Q9H4L4 574 aaPredicted RBP9.2□□□□□ -0.94
SMARCAD1-203ENST00000394961 C11orf95C9JLR9 678 aaPredicted RBP9.2□□□□□ -0.94
SMARCAD1-203ENST00000394961 FOXO3O43524 673 aa9.19□□□□□ -0.94
SMARCAD1-203ENST00000394961 TMEM132EQ6IEE7 984 aa9.19□□□□□ -0.94
SMARCAD1-203ENST00000394961 SPATA31A5Q5VU36 1347 aa9.18□□□□□ -0.94
SMARCAD1-203ENST00000394961 SPATA31A7Q8IWB4 1347 aa9.18□□□□□ -0.94
SMARCAD1-203ENST00000394961 NHSQ6T4R5 1651 aa9.18□□□□□ -0.94
SMARCAD1-203ENST00000394961 ADAMTS2O95450 1211 aa9.17□□□□□ -0.94
SMARCAD1-203ENST00000394961 NFAT5O94916 1531 aa9.17□□□□□ -0.94
SMARCAD1-203ENST00000394961 BARGINQ6ZT62 677 aa9.17□□□□□ -0.94
SMARCAD1-203ENST00000394961 CAMTA1Q9Y6Y1 1673 aa9.16□□□□□ -0.94
SMARCAD1-203ENST00000394961 RGL3Q3MIN7 710 aa9.16□□□□□ -0.94
SMARCAD1-203ENST00000394961 PPARGC1BQ86YN6 1023 aaKnown RBP9.16□□□□□ -0.94
SMARCAD1-203ENST00000394961 LTN1O94822 1766 aa9.16□□□□□ -0.94
SMARCAD1-203ENST00000394961 RGPD5Q99666 1765 aa9.16□□□□□ -0.94
SMARCAD1-203ENST00000394961 STK26Q9P289 416 aa9.15□□□□□ -0.94
SMARCAD1-203ENST00000394961 THRAP3Q9Y2W1 955 aaKnown RBP9.15□□□□□ -0.94
SMARCAD1-203ENST00000394961 PAPPAQ13219 1627 aa9.15□□□□□ -0.95
SMARCAD1-203ENST00000394961 USP6P35125 1406 aa9.15□□□□□ -0.95
SMARCAD1-203ENST00000394961 COL5A2P05997 1499 aaPredicted RBP9.15□□□□□ -0.95
SMARCAD1-203ENST00000394961 PUS7Q96PZ0 661 aaKnown RBP9.14□□□□□ -0.95
SMARCAD1-203ENST00000394961 CPSF1Q10570 1443 aaKnown RBP9.14□□□□□ -0.95
SMARCAD1-203ENST00000394961 FAM83GA6ND36 823 aa9.14□□□□□ -0.95
SMARCAD1-203ENST00000394961 ZRANB1Q9UGI0 708 aa9.14□□□□□ -0.95
SMARCAD1-203ENST00000394961 AATKQ6ZMQ8 1374 aa9.14□□□□□ -0.95
SMARCAD1-203ENST00000394961 POGKQ9P215 609 aa9.14□□□□□ -0.95
SMARCAD1-203ENST00000394961 SPATA31A1Q5TZJ5 1347 aa9.14□□□□□ -0.95
SMARCAD1-203ENST00000394961 SEPT12Q8IYM1 358 aa9.13□□□□□ -0.95
SMARCAD1-203ENST00000394961 ANKRD26Q9UPS8 1709 aa9.13□□□□□ -0.95
SMARCAD1-203ENST00000394961 USP31Q70CQ4 1352 aa9.13□□□□□ -0.95
SMARCAD1-203ENST00000394961 KRT27Q7Z3Y8 459 aa9.12□□□□□ -0.95
SMARCAD1-203ENST00000394961 NUDT16Q96DE0 195 aaKnown RBP9.12□□□□□ -0.95
SMARCAD1-203ENST00000394961 PPIP5K1Q6PFW1 1433 aa9.12□□□□□ -0.95
SMARCAD1-203ENST00000394961 CCDC61Q9Y6R9 512 aa9.12□□□□□ -0.95
SMARCAD1-203ENST00000394961 SHANK3Q9BYB0 1731 aa9.11□□□□□ -0.95
SMARCAD1-203ENST00000394961 DCAF11Q8TEB1 546 aa9.11□□□□□ -0.95
SMARCAD1-203ENST00000394961 CRB1P82279 1406 aa9.11□□□□□ -0.95
SMARCAD1-203ENST00000394961 LY75O60449 1722 aa9.1□□□□□ -0.95
SMARCAD1-203ENST00000394961 TTC21AQ8NDW8 1320 aa9.1□□□□□ -0.95
SMARCAD1-203ENST00000394961 NINLQ9Y2I6 1382 aa9.09□□□□□ -0.95
SMARCAD1-203ENST00000394961 KIF20BQ96Q89 1820 aa9.09□□□□□ -0.95
SMARCAD1-203ENST00000394961 CENPJQ9HC77 1338 aaPredicted RBP9.09□□□□□ -0.95
SMARCAD1-203ENST00000394961 CDK19Q9BWU1 502 aa9.09□□□□□ -0.95
SMARCAD1-203ENST00000394961 TRAK1Q9UPV9 953 aa9.09□□□□□ -0.95
SMARCAD1-203ENST00000394961 KIAA0232Q92628 1395 aa9.09□□□□□ -0.95
SMARCAD1-203ENST00000394961 CD163L1Q9NR16 1453 aa9.09□□□□□ -0.95
SMARCAD1-203ENST00000394961 NBPF8Q3BBV2 869 aa9.09□□□□□ -0.96
SMARCAD1-203ENST00000394961 ACEP12821 1306 aa9.08□□□□□ -0.96
SMARCAD1-203ENST00000394961 XPCQ01831 940 aaPredicted RBP9.08□□□□□ -0.96
SMARCAD1-203ENST00000394961 BAG6P46379 1132 aa9.08□□□□□ -0.96
SMARCAD1-203ENST00000394961 MINK1Q8N4C8 1332 aaPredicted RBP9.07□□□□□ -0.96
SMARCAD1-203ENST00000394961 BTG4Q9NY30 223 aa9.07□□□□□ -0.96
SMARCAD1-203ENST00000394961 FAM196AQ6ZSG2 479 aa9.07□□□□□ -0.96
SMARCAD1-203ENST00000394961 CDCA7Q9BWT1 371 aaPredicted RBP9.07□□□□□ -0.96
SMARCAD1-203ENST00000394961 OVOS2A0A0G2JMS6 1433 aa9.07□□□□□ -0.96
SMARCAD1-203ENST00000394961 OVOS2A0A0J9YW53 1432 aa9.07□□□□□ -0.96
SMARCAD1-203ENST00000394961 OVOS2Q6IE36 1432 aa9.07□□□□□ -0.96
SMARCAD1-203ENST00000394961 ZNF831Q5JPB2 1677 aa9.06□□□□□ -0.96
SMARCAD1-203ENST00000394961 ZNF692Q9BU19 519 aaPredicted RBP9.06□□□□□ -0.96
SMARCAD1-203ENST00000394961 PLEKHG2Q9H7P9 1386 aa9.06□□□□□ -0.96
SMARCAD1-203ENST00000394961 SF3B2Q13435 895 aaKnown RBP9.06□□□□□ -0.96
SMARCAD1-203ENST00000394961 NGDNQ8NEJ9 315 aaKnown RBP9.06□□□□□ -0.96
SMARCAD1-203ENST00000394961 PMFBP1Q8TBY8 1022 aa9.06□□□□□ -0.96
SMARCAD1-203ENST00000394961 CAMKK2Q96RR4 588 aa9.06□□□□□ -0.96
SMARCAD1-203ENST00000394961 NLRP13Q86W25 1043 aa9.05□□□□□ -0.96
SMARCAD1-203ENST00000394961 TNS2Q63HR2 1409 aa9.05□□□□□ -0.96
SMARCAD1-203ENST00000394961 MYOM1P52179 1685 aa9.05□□□□□ -0.96
SMARCAD1-203ENST00000394961 BTAF1O14981 1849 aa9.05□□□□□ -0.96
SMARCAD1-203ENST00000394961 CCDC7Q96M83 1385 aa9.05□□□□□ -0.96
SMARCAD1-203ENST00000394961 EVC2Q86UK5 1308 aa9.04□□□□□ -0.96
SMARCAD1-203ENST00000394961 PKD1L3Q7Z443 1732 aa9.04□□□□□ -0.96
SMARCAD1-203ENST00000394961 CABLES1Q8TDN4 633 aa9.04□□□□□ -0.96
SMARCAD1-203ENST00000394961 SLC24A1O60721 1099 aa9.04□□□□□ -0.96
SMARCAD1-203ENST00000394961 TUBGCP6Q96RT7 1819 aa9.04□□□□□ -0.96
SMARCAD1-203ENST00000394961 EDC4Q6P2E9 1401 aaKnown RBP9.04□□□□□ -0.96
SMARCAD1-203ENST00000394961 HAP1P54257 671 aaPredicted RBP9.03□□□□□ -0.96
SMARCAD1-203ENST00000394961 PRDM11Q9NQV5 511 aa9.03□□□□□ -0.96
SMARCAD1-203ENST00000394961 CICQ96RK0 1608 aaPredicted RBP9.03□□□□□ -0.96
SMARCAD1-203ENST00000394961 TCP11L2Q8N4U5 519 aa9.03□□□□□ -0.96
SMARCAD1-203ENST00000394961 NUTM2FA1L443 756 aa9.02□□□□□ -0.96
SMARCAD1-203ENST00000394961 KCNH5Q8NCM2 988 aa9.02□□□□□ -0.96
SMARCAD1-203ENST00000394961 PLSCR1O15162 318 aa9.02□□□□□ -0.97
SMARCAD1-203ENST00000394961 WDR17Q8IZU2 1322 aa9.02□□□□□ -0.97
SMARCAD1-203ENST00000394961 FAM98CQ17RN3 349 aaKnown RBP9.01□□□□□ -0.97
SMARCAD1-203ENST00000394961 GCP02774 474 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms