RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 VPS72Q15906 364 aa26.43■■□□□ 1.82
PDLIM7-205ENST00000393551 POLR3AO14802 1390 aaPredicted RBP26.4■■□□□ 1.82
PDLIM7-205ENST00000393551 PAK3O75914 559 aaPredicted RBP26.39■■□□□ 1.82
PDLIM7-205ENST00000393551 SRCAPQ6ZRS2 3230 aa26.39■■□□□ 1.82
PDLIM7-205ENST00000393551 COL14A1Q05707 1796 aaKnown RBP26.38■■□□□ 1.81
PDLIM7-205ENST00000393551 CCDC61Q9Y6R9 512 aa26.38■■□□□ 1.81
PDLIM7-205ENST00000393551 ACEP12821 1306 aa26.38■■□□□ 1.81
PDLIM7-205ENST00000393551 ONECUT3O60422 494 aaPredicted RBP26.37■■□□□ 1.81
PDLIM7-205ENST00000393551 QRICH2Q9H0J4 1663 aa26.36■■□□□ 1.81
PDLIM7-205ENST00000393551 PLEKHG3A1L390 1219 aa26.36■■□□□ 1.81
PDLIM7-205ENST00000393551 NBPF8Q3BBV2 869 aa26.36■■□□□ 1.81
PDLIM7-205ENST00000393551 BTG4Q9NY30 223 aa26.36■■□□□ 1.81
PDLIM7-205ENST00000393551 CENPJQ9HC77 1338 aaPredicted RBP26.36■■□□□ 1.81
PDLIM7-205ENST00000393551 TRPM1Q7Z4N2 1603 aa26.36■■□□□ 1.81
PDLIM7-205ENST00000393551 SEPT12Q8IYM1 358 aa26.35■■□□□ 1.81
PDLIM7-205ENST00000393551 PHRF1Q9P1Y6 1649 aaKnown RBP26.34■■□□□ 1.81
PDLIM7-205ENST00000393551 CCDC9Q9Y3X0 531 aaKnown RBP26.33■■□□□ 1.81
PDLIM7-205ENST00000393551 NEUROD1Q13562 356 aa26.32■■□□□ 1.8
PDLIM7-205ENST00000393551 NUTM2GQ5VZR2 741 aa26.31■■□□□ 1.8
PDLIM7-205ENST00000393551 CABP2Q9NPB3 220 aa26.31■■□□□ 1.8
PDLIM7-205ENST00000393551 SRPK2P78362 688 aaKnown RBP26.29■■□□□ 1.8
PDLIM7-205ENST00000393551 CCDC125Q86Z20 511 aa26.29■■□□□ 1.8
PDLIM7-205ENST00000393551 PPIP5K1Q6PFW1 1433 aa26.29■■□□□ 1.8
PDLIM7-205ENST00000393551 KIAA0232Q92628 1395 aa26.28■■□□□ 1.8
PDLIM7-205ENST00000393551 PRDM11Q9NQV5 511 aa26.27■■□□□ 1.8
PDLIM7-205ENST00000393551 FAM98CQ17RN3 349 aaKnown RBP26.26■■□□□ 1.79
PDLIM7-205ENST00000393551 SPATA31A5Q5VU36 1347 aa26.25■■□□□ 1.79
PDLIM7-205ENST00000393551 SPATA31A7Q8IWB4 1347 aa26.25■■□□□ 1.79
PDLIM7-205ENST00000393551 CHRNA2Q15822 529 aa26.25■■□□□ 1.79
PDLIM7-205ENST00000393551 NRKQ7Z2Y5 1582 aa26.24■■□□□ 1.79
PDLIM7-205ENST00000393551 BLMP54132 1417 aaPredicted RBP26.24■■□□□ 1.79
PDLIM7-205ENST00000393551 KRT27Q7Z3Y8 459 aa26.24■■□□□ 1.79
PDLIM7-205ENST00000393551 ZC3H6P61129 1189 aaKnown RBP26.23■■□□□ 1.79
PDLIM7-205ENST00000393551 ABTB2Q8N961 1025 aa26.23■■□□□ 1.79
PDLIM7-205ENST00000393551 CABP1Q9NZU7 370 aa26.22■■□□□ 1.79
PDLIM7-205ENST00000393551 ROCK2O75116 1388 aaKnown RBP26.21■■□□□ 1.79
PDLIM7-205ENST00000393551 USP19O94966 1318 aa26.21■■□□□ 1.79
PDLIM7-205ENST00000393551 THSD7AQ9UPZ6 1657 aa26.21■■□□□ 1.79
PDLIM7-205ENST00000393551 DEFB132Q7Z7B7 95 aa26.18■■□□□ 1.78
PDLIM7-205ENST00000393551 SPATA31A1Q5TZJ5 1347 aa26.17■■□□□ 1.78
PDLIM7-205ENST00000393551 USP6P35125 1406 aa26.17■■□□□ 1.78
PDLIM7-205ENST00000393551 A0A0G2JS52 829 aa26.17■■□□□ 1.78
PDLIM7-205ENST00000393551 MYT1Q01538 1121 aa26.17■■□□□ 1.78
PDLIM7-205ENST00000393551 LMO7Q8WWI1 1683 aa26.17■■□□□ 1.78
PDLIM7-205ENST00000393551 CAMTA1Q9Y6Y1 1673 aa26.17■■□□□ 1.78
PDLIM7-205ENST00000393551 SSH2Q76I76 1423 aa26.16■■□□□ 1.78
PDLIM7-205ENST00000393551 CPDO75976 1380 aa26.16■■□□□ 1.78
PDLIM7-205ENST00000393551 EVC2Q86UK5 1308 aa26.15■■□□□ 1.78
PDLIM7-205ENST00000393551 STRN4Q9NRL3 753 aa26.15■■□□□ 1.78
PDLIM7-205ENST00000393551 GCP02774 474 aa26.14■■□□□ 1.78
PDLIM7-205ENST00000393551 FAM182BQ5T319 152 aa26.14■■□□□ 1.78
PDLIM7-205ENST00000393551 NLRP13Q86W25 1043 aa26.14■■□□□ 1.78
PDLIM7-205ENST00000393551 BRD4O60885 1362 aaPredicted RBP26.14■■□□□ 1.78
PDLIM7-205ENST00000393551 ZRANB1Q9UGI0 708 aa26.13■■□□□ 1.77
PDLIM7-205ENST00000393551 PIK3C2AO00443 1686 aa26.12■■□□□ 1.77
PDLIM7-205ENST00000393551 AKAP12Q02952 1782 aa26.1■■□□□ 1.77
PDLIM7-205ENST00000393551 SLIT3O75094 1523 aa26.09■■□□□ 1.77
PDLIM7-205ENST00000393551 LARP1Q6PKG0 1096 aaKnown RBP26.09■■□□□ 1.77
PDLIM7-205ENST00000393551 NLRP6P59044 892 aa26.08■■□□□ 1.77
PDLIM7-205ENST00000393551 SF3B2Q13435 895 aaKnown RBP26.07■■□□□ 1.76
PDLIM7-205ENST00000393551 USP35Q9P2H5 1018 aa26.07■■□□□ 1.76
PDLIM7-205ENST00000393551 EVA1CP58658 441 aa26.06■■□□□ 1.76
PDLIM7-205ENST00000393551 COL5A2P05997 1499 aaPredicted RBP26.05■■□□□ 1.76
PDLIM7-205ENST00000393551 SBNO2Q9Y2G9 1366 aa26.05■■□□□ 1.76
PDLIM7-205ENST00000393551 RGPD1P0DJD0 1748 aa26.05■■□□□ 1.76
PDLIM7-205ENST00000393551 COL18A1P39060 1754 aa26.05■■□□□ 1.76
PDLIM7-205ENST00000393551 CPSF1Q10570 1443 aaKnown RBP26.05■■□□□ 1.76
PDLIM7-205ENST00000393551 BARGINQ6ZT62 677 aa26.04■■□□□ 1.76
PDLIM7-205ENST00000393551 CARD11Q9BXL7 1154 aa26.04■■□□□ 1.76
PDLIM7-205ENST00000393551 TNS1Q9HBL0 1735 aaKnown RBP26.03■■□□□ 1.76
PDLIM7-205ENST00000393551 TTC21BQ7Z4L5 1316 aa26.03■■□□□ 1.76
PDLIM7-205ENST00000393551 ZNF692Q9BU19 519 aaPredicted RBP26.02■■□□□ 1.76
PDLIM7-205ENST00000393551 TONSLQ96HA7 1378 aa26.02■■□□□ 1.76
PDLIM7-205ENST00000393551 AATKQ6ZMQ8 1374 aa26■■□□□ 1.75
PDLIM7-205ENST00000393551 TCP11L2Q8N4U5 519 aa26■■□□□ 1.75
PDLIM7-205ENST00000393551 MON2Q7Z3U7 1717 aa26■■□□□ 1.75
PDLIM7-205ENST00000393551 BAG6P46379 1132 aa25.99■■□□□ 1.75
PDLIM7-205ENST00000393551 TRIM26Q12899 539 aaPredicted RBP25.99■■□□□ 1.75
PDLIM7-205ENST00000393551 CD163L1Q9NR16 1453 aa25.98■■□□□ 1.75
PDLIM7-205ENST00000393551 EN1Q05925 392 aaPredicted RBP25.98■■□□□ 1.75
PDLIM7-205ENST00000393551 AXIN2Q9Y2T1 843 aa25.98■■□□□ 1.75
PDLIM7-205ENST00000393551 ZBTB7CA1YPR0 619 aa25.97■■□□□ 1.75
PDLIM7-205ENST00000393551 KTN1Q86UP2 1357 aaKnown RBP25.96■■□□□ 1.75
PDLIM7-205ENST00000393551 RGPD5Q99666 1765 aa25.96■■□□□ 1.75
PDLIM7-205ENST00000393551 PARP4Q9UKK3 1724 aaKnown RBP25.96■■□□□ 1.75
PDLIM7-205ENST00000393551 DISP2A7MBM2 1401 aa25.96■■□□□ 1.75
PDLIM7-205ENST00000393551 CRB1P82279 1406 aa25.96■■□□□ 1.75
PDLIM7-205ENST00000393551 TTC21AQ8NDW8 1320 aa25.95■■□□□ 1.75
PDLIM7-205ENST00000393551 FAM196AQ6ZSG2 479 aa25.95■■□□□ 1.74
PDLIM7-205ENST00000393551 ARHGEF25Q86VW2 580 aa25.95■■□□□ 1.74
PDLIM7-205ENST00000393551 THRAP3Q9Y2W1 955 aaKnown RBP25.95■■□□□ 1.74
PDLIM7-205ENST00000393551 TRIM37O94972 964 aa25.94■■□□□ 1.74
PDLIM7-205ENST00000393551 NFAT5O94916 1531 aa25.93■■□□□ 1.74
PDLIM7-205ENST00000393551 PDE3BQ13370 1112 aa25.91■■□□□ 1.74
PDLIM7-205ENST00000393551 SOX12O15370 315 aa25.9■■□□□ 1.74
PDLIM7-205ENST00000393551 KCNH5Q8NCM2 988 aa25.9■■□□□ 1.74
PDLIM7-205ENST00000393551 SLC12A5Q9H2X9 1139 aa25.9■■□□□ 1.74
PDLIM7-205ENST00000393551 USP54Q70EL1 1684 aa25.9■■□□□ 1.74
PDLIM7-205ENST00000393551 EZH2Q15910 746 aaKnown RBP25.89■■□□□ 1.74
PDLIM7-205ENST00000393551 CAMKK2Q96RR4 588 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms