RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 AK7Q96M32 723 aa9.23□□□□□ -0.93
VTI1A-201ENST00000393077 LEKR1Q6ZMV7 388 aa9.22□□□□□ -0.93
VTI1A-201ENST00000393077 CLUAP1Q96AJ1 413 aa9.22□□□□□ -0.93
VTI1A-201ENST00000393077 USP47Q96K76 1375 aa9.22□□□□□ -0.93
VTI1A-201ENST00000393077 MBD3O95983 291 aa9.22□□□□□ -0.93
VTI1A-201ENST00000393077 ABCC5O15440 1437 aa9.22□□□□□ -0.93
VTI1A-201ENST00000393077 SMC4Q9NTJ3 1288 aa9.22□□□□□ -0.93
VTI1A-201ENST00000393077 SEC24BO95487 1268 aa9.21□□□□□ -0.93
VTI1A-201ENST00000393077 NEUROD2Q15784 382 aa9.21□□□□□ -0.93
VTI1A-201ENST00000393077 DRC1Q96MC2 740 aa9.21□□□□□ -0.93
VTI1A-201ENST00000393077 TPD52L1Q16890 204 aaPredicted RBP9.21□□□□□ -0.94
VTI1A-201ENST00000393077 ZSCAN23Q3MJ62 389 aa9.2□□□□□ -0.94
VTI1A-201ENST00000393077 NUP153P49790 1475 aaKnown RBP9.2□□□□□ -0.94
VTI1A-201ENST00000393077 CASC1Q6TDU7 716 aa9.2□□□□□ -0.94
VTI1A-201ENST00000393077 CCDC91Q7Z6B0 441 aa9.2□□□□□ -0.94
VTI1A-201ENST00000393077 TRAK1Q9UPV9 953 aa9.2□□□□□ -0.94
VTI1A-201ENST00000393077 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.2□□□□□ -0.94
VTI1A-201ENST00000393077 ADAMTS12P58397 1594 aa9.2□□□□□ -0.94
VTI1A-201ENST00000393077 SSFA2P28290 1259 aa9.2□□□□□ -0.94
VTI1A-201ENST00000393077 FOXD4L6Q3SYB3 417 aaPredicted RBP9.2□□□□□ -0.94
VTI1A-201ENST00000393077 FOXD4L3Q6VB84 417 aaPredicted RBP9.2□□□□□ -0.94
VTI1A-201ENST00000393077 MNS1Q8NEH6 495 aa9.2□□□□□ -0.94
VTI1A-201ENST00000393077 PTPN23Q9H3S7 1636 aa9.2□□□□□ -0.94
VTI1A-201ENST00000393077 POLR3GO15318 223 aaPredicted RBP9.2□□□□□ -0.94
VTI1A-201ENST00000393077 SPC24Q8NBT2 197 aa9.2□□□□□ -0.94
VTI1A-201ENST00000393077 RAPGEF3O95398 923 aa9.19□□□□□ -0.94
VTI1A-201ENST00000393077 PRIM1P49642 420 aaKnown RBP9.19□□□□□ -0.94
VTI1A-201ENST00000393077 TXLNBQ8N3L3 684 aa9.19□□□□□ -0.94
VTI1A-201ENST00000393077 ANTXR1Q9H6X2 564 aa9.19□□□□□ -0.94
VTI1A-201ENST00000393077 PDZRN3Q9UPQ7 1066 aa9.19□□□□□ -0.94
VTI1A-201ENST00000393077 SCAPERQ9BY12 1400 aa9.19□□□□□ -0.94
VTI1A-201ENST00000393077 GEMIN8Q9NWZ8 242 aaKnown RBP9.19□□□□□ -0.94
VTI1A-201ENST00000393077 BRD4O60885 1362 aaPredicted RBP9.19□□□□□ -0.94
VTI1A-201ENST00000393077 USP8P40818 1118 aa9.19□□□□□ -0.94
VTI1A-201ENST00000393077 TTC12Q9H892 705 aaPredicted RBP9.18□□□□□ -0.94
VTI1A-201ENST00000393077 EIF4G3O43432 1585 aaKnown RBP9.18□□□□□ -0.94
VTI1A-201ENST00000393077 ABCA5Q8WWZ7 1642 aa9.18□□□□□ -0.94
VTI1A-201ENST00000393077 WDR62O43379 1518 aa9.18□□□□□ -0.94
VTI1A-201ENST00000393077 CAMSAP2Q08AD1 1489 aa9.18□□□□□ -0.94
VTI1A-201ENST00000393077 ST18O60284 1047 aa9.18□□□□□ -0.94
VTI1A-201ENST00000393077 RDXP35241 583 aaKnown RBP9.18□□□□□ -0.94
VTI1A-201ENST00000393077 TTC31Q49AM3 519 aaPredicted RBP9.18□□□□□ -0.94
VTI1A-201ENST00000393077 GIMAP7Q8NHV1 300 aa9.18□□□□□ -0.94
VTI1A-201ENST00000393077 RTF1Q92541 710 aaKnown RBP9.18□□□□□ -0.94
VTI1A-201ENST00000393077 RBSNQ9H1K0 784 aa9.18□□□□□ -0.94
VTI1A-201ENST00000393077 K7ELQ4 463 aaPredicted RBP9.18□□□□□ -0.94
VTI1A-201ENST00000393077 RIOK3O14730 519 aaKnown RBP9.18□□□□□ -0.94
VTI1A-201ENST00000393077 BAG4O95429 457 aaKnown RBP9.18□□□□□ -0.94
VTI1A-201ENST00000393077 ZRSR1Q15695 479 aaKnown RBP9.18□□□□□ -0.94
VTI1A-201ENST00000393077 NGEFQ8N5V2 710 aa9.18□□□□□ -0.94
VTI1A-201ENST00000393077 ATP10BO94823 1461 aa9.17□□□□□ -0.94
VTI1A-201ENST00000393077 BMS1Q14692 1282 aaKnown RBP9.17□□□□□ -0.94
VTI1A-201ENST00000393077 CCDC191Q8NCU4 936 aa9.17□□□□□ -0.94
VTI1A-201ENST00000393077 HSP90AB3PQ58FF7 597 aa9.17□□□□□ -0.94
VTI1A-201ENST00000393077 CT47A1Q5JQC4 288 aaPredicted RBP9.17□□□□□ -0.94
VTI1A-201ENST00000393077 CREBRFQ8IUR6 639 aa9.17□□□□□ -0.94
VTI1A-201ENST00000393077 FAM184AQ8NB25 1140 aa9.17□□□□□ -0.94
VTI1A-201ENST00000393077 USP25Q9UHP3 1055 aa9.17□□□□□ -0.94
VTI1A-201ENST00000393077 EIF3AQ14152 1382 aaKnown RBP9.17□□□□□ -0.94
VTI1A-201ENST00000393077 NCOA1Q15788 1441 aa9.17□□□□□ -0.94
VTI1A-201ENST00000393077 GOLGA6L4A6NEF3 574 aa9.17□□□□□ -0.94
VTI1A-201ENST00000393077 RBM28Q9NW13 759 aaKnown RBP9.17□□□□□ -0.94
VTI1A-201ENST00000393077 CTTNBP2Q8WZ74 1663 aa9.17□□□□□ -0.94
VTI1A-201ENST00000393077 A0A1B0GUL7 405 aa9.16□□□□□ -0.94
VTI1A-201ENST00000393077 PIBF1Q8WXW3 757 aa9.16□□□□□ -0.94
VTI1A-201ENST00000393077 YY1AP1Q9H869 796 aa9.16□□□□□ -0.94
VTI1A-201ENST00000393077 ROCK1Q13464 1354 aa9.16□□□□□ -0.94
VTI1A-201ENST00000393077 KIAA1107Q9UPP5 1409 aa9.16□□□□□ -0.94
VTI1A-201ENST00000393077 GNL2Q13823 731 aaKnown RBP9.16□□□□□ -0.94
VTI1A-201ENST00000393077 ICE2Q659A1 982 aa9.16□□□□□ -0.94
VTI1A-201ENST00000393077 UGGT2Q9NYU1 1516 aa9.16□□□□□ -0.94
VTI1A-201ENST00000393077 GPATCH8Q9UKJ3 1502 aaKnown RBP9.16□□□□□ -0.94
VTI1A-201ENST00000393077 PANK1Q8TE04 598 aa9.16□□□□□ -0.94
VTI1A-201ENST00000393077 C16orf45Q96MC5 204 aaPredicted RBP9.16□□□□□ -0.94
VTI1A-201ENST00000393077 MNAT1P51948 309 aa9.16□□□□□ -0.94
VTI1A-201ENST00000393077 SLC20A2Q08357 652 aa9.16□□□□□ -0.94
VTI1A-201ENST00000393077 TTLL5Q6EMB2 1281 aa9.16□□□□□ -0.94
VTI1A-201ENST00000393077 LRSAM1Q6UWE0 723 aa9.16□□□□□ -0.94
VTI1A-201ENST00000393077 ANKRD20A12PQ8NF67 263 aa9.16□□□□□ -0.94
VTI1A-201ENST00000393077 RBM27Q9P2N5 1060 aaKnown RBP9.16□□□□□ -0.94
VTI1A-201ENST00000393077 DISP1Q96F81 1524 aa9.15□□□□□ -0.94
VTI1A-201ENST00000393077 TARBP1Q13395 1621 aaKnown RBP9.15□□□□□ -0.94
VTI1A-201ENST00000393077 JARID2Q92833 1246 aaPredicted RBP9.15□□□□□ -0.94
VTI1A-201ENST00000393077 CFAP44Q96MT7 982 aa9.15□□□□□ -0.94
VTI1A-201ENST00000393077 ZBTB12Q9Y330 459 aaPredicted RBP9.15□□□□□ -0.94
VTI1A-201ENST00000393077 CEP83Q9Y592 693 aa9.15□□□□□ -0.94
VTI1A-201ENST00000393077 H0YHG0 523 aa9.15□□□□□ -0.94
VTI1A-201ENST00000393077 SARNPP82979 210 aaKnown RBP9.15□□□□□ -0.94
VTI1A-201ENST00000393077 RAB3GAP1Q15042 981 aa9.15□□□□□ -0.94
VTI1A-201ENST00000393077 TERF2Q15554 542 aa9.15□□□□□ -0.94
VTI1A-201ENST00000393077 NCAPGQ9BPX3 1015 aa9.15□□□□□ -0.94
VTI1A-201ENST00000393077 DNAAF4Q8WXU2 420 aa9.15□□□□□ -0.95
VTI1A-201ENST00000393077 RNF216Q9NWF9 866 aaPredicted RBP9.15□□□□□ -0.95
VTI1A-201ENST00000393077 KDM2BQ8NHM5 1336 aa9.15□□□□□ -0.95
VTI1A-201ENST00000393077 MAPKBP1O60336 1514 aa9.15□□□□□ -0.95
VTI1A-201ENST00000393077 LRCH2Q5VUJ6 765 aa9.14□□□□□ -0.95
VTI1A-201ENST00000393077 KRBA2Q6ZNG9 492 aa9.14□□□□□ -0.95
VTI1A-201ENST00000393077 ZNF397Q8NF99 534 aaPredicted RBP9.14□□□□□ -0.95
VTI1A-201ENST00000393077 ZNF445P59923 1031 aa9.14□□□□□ -0.95
VTI1A-201ENST00000393077 C17orf53Q8N3J3 647 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms