RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 MAP4K4O95819 1239 aaPredicted RBP4.68□□□□□ -1.66
XRN1-202ENST00000392981 CTDSPL2Q05D32 466 aa4.68□□□□□ -1.66
XRN1-202ENST00000392981 SPIRE2Q8WWL2 714 aa4.68□□□□□ -1.66
XRN1-202ENST00000392981 PHOX2BQ99453 314 aa4.68□□□□□ -1.66
XRN1-202ENST00000392981 RNF39Q9H2S5 420 aa4.68□□□□□ -1.66
XRN1-202ENST00000392981 WDHD1O75717 1129 aaPredicted RBP4.68□□□□□ -1.66
XRN1-202ENST00000392981 CNGA1P29973 690 aa4.68□□□□□ -1.66
XRN1-202ENST00000392981 BRD3Q15059 726 aa4.68□□□□□ -1.66
XRN1-202ENST00000392981 ATP2B2Q01814 1243 aa4.68□□□□□ -1.66
XRN1-202ENST00000392981 PADI6Q6TGC4 694 aa4.68□□□□□ -1.66
XRN1-202ENST00000392981 APBB1IPQ7Z5R6 666 aaPredicted RBP4.68□□□□□ -1.66
XRN1-202ENST00000392981 METTL3Q86U44 580 aaKnown RBP4.68□□□□□ -1.66
XRN1-202ENST00000392981 GPATCH11Q8N954 259 aa4.68□□□□□ -1.66
XRN1-202ENST00000392981 METTL14Q9HCE5 456 aaKnown RBP4.68□□□□□ -1.66
XRN1-202ENST00000392981 UNC13AQ9UPW8 1703 aa4.68□□□□□ -1.66
XRN1-202ENST00000392981 TMEM88BA6NKF7 163 aa4.68□□□□□ -1.66
XRN1-202ENST00000392981 ITGAEP38570 1179 aa4.68□□□□□ -1.66
XRN1-202ENST00000392981 ESF1Q9H501 851 aaKnown RBP4.68□□□□□ -1.66
XRN1-202ENST00000392981 C2orf72A6NCS6 295 aa4.68□□□□□ -1.66
XRN1-202ENST00000392981 SCAMP3O14828 347 aaKnown RBP4.68□□□□□ -1.66
XRN1-202ENST00000392981 SDE2Q6IQ49 451 aa4.68□□□□□ -1.66
XRN1-202ENST00000392981 TXNDC2Q86VQ3 553 aa4.67□□□□□ -1.66
XRN1-202ENST00000392981 SULF1Q8IWU6 871 aa4.67□□□□□ -1.66
XRN1-202ENST00000392981 SBNO2Q9Y2G9 1366 aa4.67□□□□□ -1.66
XRN1-202ENST00000392981 FMNL1O95466 1100 aaPredicted RBP4.67□□□□□ -1.66
XRN1-202ENST00000392981 BIRC2Q13490 618 aa4.67□□□□□ -1.66
XRN1-202ENST00000392981 USP17L3A6NCW0 530 aa4.67□□□□□ -1.66
XRN1-202ENST00000392981 USP17L4A6NCW7 530 aa4.67□□□□□ -1.66
XRN1-202ENST00000392981 ATP9BO43861 1147 aa4.67□□□□□ -1.66
XRN1-202ENST00000392981 USP17L2Q6R6M4 530 aa4.67□□□□□ -1.66
XRN1-202ENST00000392981 USP17L1Q7RTZ2 530 aa4.67□□□□□ -1.66
XRN1-202ENST00000392981 TTC16Q8NEE8 873 aa4.67□□□□□ -1.66
XRN1-202ENST00000392981 RNF34Q969K3 372 aa4.67□□□□□ -1.66
XRN1-202ENST00000392981 NEUROD4Q9HD90 331 aa4.67□□□□□ -1.66
XRN1-202ENST00000392981 GNEQ9Y223 722 aaKnown RBP4.67□□□□□ -1.66
XRN1-202ENST00000392981 FDX1P10109 184 aa4.66□□□□□ -1.66
XRN1-202ENST00000392981 SRPK2P78362 688 aaKnown RBP4.66□□□□□ -1.66
XRN1-202ENST00000392981 RALBP1Q15311 655 aa4.66□□□□□ -1.66
XRN1-202ENST00000392981 NOP9Q86U38 636 aaKnown RBP4.66□□□□□ -1.66
XRN1-202ENST00000392981 CHMP7Q8WUX9 453 aaPredicted RBP4.66□□□□□ -1.66
XRN1-202ENST00000392981 MPHOSPH6Q99547 160 aaKnown RBP4.66□□□□□ -1.66
XRN1-202ENST00000392981 HMX1Q9NP08 348 aaPredicted RBP4.66□□□□□ -1.66
XRN1-202ENST00000392981 ZRANB1Q9UGI0 708 aa4.66□□□□□ -1.66
XRN1-202ENST00000392981 USP17L5A8MUK1 530 aa4.66□□□□□ -1.66
XRN1-202ENST00000392981 TNNI2P48788 182 aa4.66□□□□□ -1.66
XRN1-202ENST00000392981 RBM42Q9BTD8 480 aaKnown RBP4.66□□□□□ -1.66
XRN1-202ENST00000392981 TRIM55Q9BYV6 548 aa4.66□□□□□ -1.66
XRN1-202ENST00000392981 FARP1Q9Y4F1 1045 aaPredicted RBP4.66□□□□□ -1.66
XRN1-202ENST00000392981 NAA30Q147X3 362 aaPredicted RBP4.65□□□□□ -1.66
XRN1-202ENST00000392981 TEX2Q8IWB9 1127 aa4.65□□□□□ -1.66
XRN1-202ENST00000392981 JDP2Q8WYK2 163 aa4.65□□□□□ -1.66
XRN1-202ENST00000392981 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.65□□□□□ -1.662e-6■■□□□ 13.2
XRN1-202ENST00000392981 PCDHB9Q9Y5E1 797 aa4.65□□□□□ -1.66
XRN1-202ENST00000392981 PIK3CDO00329 1044 aa4.65□□□□□ -1.66
XRN1-202ENST00000392981 SSBP05455 408 aaKnown RBP eCLIP4.65□□□□□ -1.66
XRN1-202ENST00000392981 SOX11P35716 441 aa4.65□□□□□ -1.66
XRN1-202ENST00000392981 SETQ01105 290 aaPredicted RBP4.65□□□□□ -1.66
XRN1-202ENST00000392981 OXLD1Q5BKU9 147 aa4.65□□□□□ -1.66
XRN1-202ENST00000392981 RSBN1LQ6PCB5 846 aaPredicted RBP4.65□□□□□ -1.66
XRN1-202ENST00000392981 CT47A1Q5JQC4 288 aaPredicted RBP4.65□□□□□ -1.67
XRN1-202ENST00000392981 UCN2Q96RP3 112 aa4.65□□□□□ -1.67
XRN1-202ENST00000392981 PLIN1O60240 522 aa4.65□□□□□ -1.67
XRN1-202ENST00000392981 RECKO95980 971 aa4.65□□□□□ -1.67
XRN1-202ENST00000392981 ZNF76P36508 570 aa4.65□□□□□ -1.67
XRN1-202ENST00000392981 ARID5AQ03989 594 aa4.65□□□□□ -1.67
XRN1-202ENST00000392981 NR6A1Q15406 480 aa4.65□□□□□ -1.67
XRN1-202ENST00000392981 RNF135Q8IUD6 432 aa4.65□□□□□ -1.67
XRN1-202ENST00000392981 PIK3R5Q8WYR1 880 aa4.65□□□□□ -1.67
XRN1-202ENST00000392981 ACBD3Q9H3P7 528 aa4.65□□□□□ -1.67
XRN1-202ENST00000392981 TLDC2A0PJX2 215 aa4.64□□□□□ -1.67
XRN1-202ENST00000392981 NAP1L4Q99733 375 aaKnown RBP4.64□□□□□ -1.67
XRN1-202ENST00000392981 CHPF2Q9P2E5 772 aa4.64□□□□□ -1.67
XRN1-202ENST00000392981 USP17L15C9J2P7 530 aa4.64□□□□□ -1.67
XRN1-202ENST00000392981 USP17L10C9JJH3 530 aa4.64□□□□□ -1.67
XRN1-202ENST00000392981 USP17L13C9JLJ4 530 aa4.64□□□□□ -1.67
XRN1-202ENST00000392981 USP17L12C9JPN9 530 aa4.64□□□□□ -1.67
XRN1-202ENST00000392981 USP17L11C9JVI0 530 aa4.64□□□□□ -1.67
XRN1-202ENST00000392981 USP17L21D6R901 530 aa4.64□□□□□ -1.67
XRN1-202ENST00000392981 USP17L18D6R9N7 530 aa4.64□□□□□ -1.67
XRN1-202ENST00000392981 USP17L22D6RA61 530 aa4.64□□□□□ -1.67
XRN1-202ENST00000392981 USP17L17D6RBQ6 530 aa4.64□□□□□ -1.67
XRN1-202ENST00000392981 USP17L19D6RCP7 530 aa4.64□□□□□ -1.67
XRN1-202ENST00000392981 USP17L20D6RJB6 530 aa4.64□□□□□ -1.67
XRN1-202ENST00000392981 CTHP32929 405 aa4.64□□□□□ -1.67
XRN1-202ENST00000392981 USP17L24Q0WX57 530 aa4.64□□□□□ -1.67
XRN1-202ENST00000392981 DMGDHQ9UI17 866 aaKnown RBP4.64□□□□□ -1.67
XRN1-202ENST00000392981 HDLBPQ00341 1268 aaKnown RBP4.64□□□□□ -1.67
XRN1-202ENST00000392981 DPYDQ12882 1025 aa4.64□□□□□ -1.67
XRN1-202ENST00000392981 DNAJC14Q6Y2X3 702 aaPredicted RBP4.64□□□□□ -1.67
XRN1-202ENST00000392981 HOXA2O43364 376 aa4.64□□□□□ -1.67
XRN1-202ENST00000392981 NCOA4Q13772 614 aa4.64□□□□□ -1.67
XRN1-202ENST00000392981 COL4A3BPQ9Y5P4 624 aa4.64□□□□□ -1.67
XRN1-202ENST00000392981 MRPL42Q9Y6G3 142 aaKnown RBP4.64□□□□□ -1.67
XRN1-202ENST00000392981 NDUFB5O43674 189 aa4.64□□□□□ -1.67
XRN1-202ENST00000392981 SORBS3O60504 671 aa4.64□□□□□ -1.67
XRN1-202ENST00000392981 USP5P45974 858 aa4.64□□□□□ -1.67
XRN1-202ENST00000392981 FOXK1P85037 733 aa4.64□□□□□ -1.67
XRN1-202ENST00000392981 SPTY2D1Q68D10 685 aaPredicted RBP4.64□□□□□ -1.67
XRN1-202ENST00000392981 CKAP2LQ8IYA6 745 aa4.64□□□□□ -1.67
XRN1-202ENST00000392981 REM2Q8IYK8 340 aaPredicted RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms