RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 POLR3AO14802 1390 aaPredicted RBP13.85□□□□□ -0.19
BRF1-204ENST00000392557 ALKQ9UM73 1620 aa13.85□□□□□ -0.19
BRF1-204ENST00000392557 E9PSI1 815 aa13.85□□□□□ -0.19
BRF1-204ENST00000392557 WWC1Q8IX03 1113 aa13.85□□□□□ -0.19
BRF1-204ENST00000392557 IGHDP01880 384 aa13.84□□□□□ -0.19
BRF1-204ENST00000392557 PTPRMP28827 1452 aa13.84□□□□□ -0.19
BRF1-204ENST00000392557 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.84□□□□□ -0.19
BRF1-204ENST00000392557 HDGFP51858 240 aaKnown RBP13.84□□□□□ -0.19
BRF1-204ENST00000392557 ZNF521Q96K83 1311 aa13.84□□□□□ -0.19
BRF1-204ENST00000392557 INSRP06213 1382 aa13.84□□□□□ -0.19
BRF1-204ENST00000392557 TNRQ92752 1358 aa13.84□□□□□ -0.19
BRF1-204ENST00000392557 METP08581 1390 aa13.83□□□□□ -0.19
BRF1-204ENST00000392557 KIF13AQ9H1H9 1805 aa13.83□□□□□ -0.2
BRF1-204ENST00000392557 AGLP35573 1532 aa13.83□□□□□ -0.2
BRF1-204ENST00000392557 SOX12O15370 315 aa13.82□□□□□ -0.2
BRF1-204ENST00000392557 GZF1Q9H116 711 aaPredicted RBP13.82□□□□□ -0.2
BRF1-204ENST00000392557 MAPK8IP3Q9UPT6 1336 aa13.82□□□□□ -0.2
BRF1-204ENST00000392557 PUS7Q96PZ0 661 aaKnown RBP13.81□□□□□ -0.2
BRF1-204ENST00000392557 ARHGEF40Q8TER5 1519 aa13.81□□□□□ -0.2
BRF1-204ENST00000392557 ZRANB1Q9UGI0 708 aa13.81□□□□□ -0.2
BRF1-204ENST00000392557 SEC24BO95487 1268 aa13.8□□□□□ -0.2
BRF1-204ENST00000392557 WASLO00401 505 aaPredicted RBP13.8□□□□□ -0.2
BRF1-204ENST00000392557 ABCC11Q96J66 1382 aa13.8□□□□□ -0.2
BRF1-204ENST00000392557 NME9Q86XW9 330 aa13.8□□□□□ -0.2
BRF1-204ENST00000392557 FTSJ3Q8IY81 847 aaKnown RBP13.8□□□□□ -0.2
BRF1-204ENST00000392557 NUDT16Q96DE0 195 aaKnown RBP13.79□□□□□ -0.2
BRF1-204ENST00000392557 DIAPH1O60610 1272 aaKnown RBP13.78□□□□□ -0.2
BRF1-204ENST00000392557 LTKP29376 864 aa13.78□□□□□ -0.2
BRF1-204ENST00000392557 HMOX1P09601 288 aa13.78□□□□□ -0.2
BRF1-204ENST00000392557 SPATA31D1Q6ZQQ2 1576 aa13.78□□□□□ -0.2
BRF1-204ENST00000392557 NKTRP30414 1462 aaKnown RBP13.78□□□□□ -0.2
BRF1-204ENST00000392557 NSD2O96028 1365 aa13.78□□□□□ -0.2
BRF1-204ENST00000392557 TSR2Q969E8 191 aaKnown RBP13.78□□□□□ -0.2
BRF1-204ENST00000392557 EID1Q9Y6B2 187 aa13.78□□□□□ -0.2
BRF1-204ENST00000392557 NINLQ9Y2I6 1382 aa13.77□□□□□ -0.21
BRF1-204ENST00000392557 EMILIN1Q9Y6C2 1016 aa13.76□□□□□ -0.21
BRF1-204ENST00000392557 REREQ9P2R6 1566 aa13.76□□□□□ -0.21
BRF1-204ENST00000392557 RRS1Q15050 365 aaKnown RBP13.76□□□□□ -0.21
BRF1-204ENST00000392557 TNNQ9UQP3 1299 aa13.76□□□□□ -0.21
BRF1-204ENST00000392557 MFAP1P55081 439 aaKnown RBP13.76□□□□□ -0.21
BRF1-204ENST00000392557 PPIP5K1Q6PFW1 1433 aa13.75□□□□□ -0.21
BRF1-204ENST00000392557 TMEM2Q9UHN6 1383 aa13.75□□□□□ -0.21
BRF1-204ENST00000392557 RIPK4P57078 832 aa13.75□□□□□ -0.21
BRF1-204ENST00000392557 PMFBP1Q8TBY8 1022 aa13.75□□□□□ -0.21
BRF1-204ENST00000392557 CCDC61Q9Y6R9 512 aa13.75□□□□□ -0.21
BRF1-204ENST00000392557 TRMT2AQ8IZ69 625 aaKnown RBP13.74□□□□□ -0.21
BRF1-204ENST00000392557 PDE3AQ14432 1141 aa13.74□□□□□ -0.21
BRF1-204ENST00000392557 COG3Q96JB2 828 aa13.73□□□□□ -0.21
BRF1-204ENST00000392557 CD163L1Q9NR16 1453 aa13.73□□□□□ -0.21
BRF1-204ENST00000392557 NGEFQ8N5V2 710 aa13.73□□□□□ -0.21
BRF1-204ENST00000392557 RWDD1Q9H446 243 aaPredicted RBP13.73□□□□□ -0.21
BRF1-204ENST00000392557 TMPOP42166 694 aaKnown RBP13.73□□□□□ -0.21
BRF1-204ENST00000392557 PDZRN3Q9UPQ7 1066 aa13.73□□□□□ -0.21
BRF1-204ENST00000392557 PRKAR2BP31323 418 aa13.72□□□□□ -0.21
BRF1-204ENST00000392557 MYH16Q9H6N6 1097 aa13.72□□□□□ -0.21
BRF1-204ENST00000392557 POLKQ9UBT6 870 aa13.72□□□□□ -0.21
BRF1-204ENST00000392557 PODXL2Q9NZ53 605 aa13.72□□□□□ -0.21
BRF1-204ENST00000392557 ROBO2Q9HCK4 1378 aa13.71□□□□□ -0.21
BRF1-204ENST00000392557 HSP90AA1P07900 732 aaKnown RBP13.71□□□□□ -0.22
BRF1-204ENST00000392557 ITPRIPQ8IWB1 547 aa13.71□□□□□ -0.22
BRF1-204ENST00000392557 WDR63Q8IWG1 891 aa13.71□□□□□ -0.22
BRF1-204ENST00000392557 AMOTL2Q9Y2J4 779 aa13.71□□□□□ -0.22
BRF1-204ENST00000392557 PCDHB15Q9Y5E8 787 aa13.71□□□□□ -0.22
BRF1-204ENST00000392557 SHPRHQ149N8 1683 aa13.7□□□□□ -0.22
BRF1-204ENST00000392557 RBM33Q96EV2 1170 aaKnown RBP13.7□□□□□ -0.22
BRF1-204ENST00000392557 RLBP1P12271 317 aa13.7□□□□□ -0.22
BRF1-204ENST00000392557 EXOSC9Q06265 439 aaKnown RBP13.7□□□□□ -0.22
BRF1-204ENST00000392557 THUMPD2Q9BTF0 503 aaKnown RBP13.7□□□□□ -0.22
BRF1-204ENST00000392557 SMC4Q9NTJ3 1288 aa13.7□□□□□ -0.22
BRF1-204ENST00000392557 RARSP54136 660 aaKnown RBP13.7□□□□□ -0.22
BRF1-204ENST00000392557 PRR36Q9H6K5 1346 aa13.69□□□□□ -0.22
BRF1-204ENST00000392557 ELL2O00472 640 aaPredicted RBP13.69□□□□□ -0.22
BRF1-204ENST00000392557 USP32Q8NFA0 1604 aa13.68□□□□□ -0.22
BRF1-204ENST00000392557 L1TD1Q5T7N2 865 aaKnown RBP13.67□□□□□ -0.22
BRF1-204ENST00000392557 C14orf37Q86TY3 774 aa13.67□□□□□ -0.22
BRF1-204ENST00000392557 NGDNQ8NEJ9 315 aaKnown RBP13.67□□□□□ -0.22
BRF1-204ENST00000392557 ACEP12821 1306 aa13.67□□□□□ -0.22
BRF1-204ENST00000392557 PLEKHF1Q96S99 279 aa13.67□□□□□ -0.22
BRF1-204ENST00000392557 THEMISQ8N1K5 641 aaPredicted RBP13.67□□□□□ -0.22
BRF1-204ENST00000392557 PHACTR3Q96KR7 559 aa13.67□□□□□ -0.22
BRF1-204ENST00000392557 TRIM35Q9UPQ4 493 aa13.67□□□□□ -0.22
BRF1-204ENST00000392557 NUTM2GQ5VZR2 741 aa13.66□□□□□ -0.22
BRF1-204ENST00000392557 TBC1D2Q9BYX2 928 aa13.66□□□□□ -0.22
BRF1-204ENST00000392557 GOLGA6L3A6NEY3 463 aa13.66□□□□□ -0.22
BRF1-204ENST00000392557 NAP1L5Q96NT1 182 aaPredicted RBP13.66□□□□□ -0.22
BRF1-204ENST00000392557 PNNQ9H307 717 aaKnown RBP13.66□□□□□ -0.22
BRF1-204ENST00000392557 ZKSCAN2Q63HK3 967 aa13.65□□□□□ -0.22
BRF1-204ENST00000392557 FOXD4L1Q9NU39 408 aa13.65□□□□□ -0.22
BRF1-204ENST00000392557 NLRP1Q9C000 1473 aa13.65□□□□□ -0.22
BRF1-204ENST00000392557 NRXN3Q9Y4C0 1643 aa13.65□□□□□ -0.22
BRF1-204ENST00000392557 DZIP1LQ8IYY4 767 aaKnown RBP13.65□□□□□ -0.22
BRF1-204ENST00000392557 CCDC27Q2M243 656 aa13.65□□□□□ -0.23
BRF1-204ENST00000392557 HSCBQ8IWL3 235 aa13.65□□□□□ -0.23
BRF1-204ENST00000392557 C22orf23Q9BZE7 217 aa13.65□□□□□ -0.23
BRF1-204ENST00000392557 DLC1Q96QB1 1528 aa13.64□□□□□ -0.23
BRF1-204ENST00000392557 ADAMTS13Q76LX8 1427 aa13.64□□□□□ -0.23
BRF1-204ENST00000392557 IQSEC2Q5JU85 1478 aa13.64□□□□□ -0.23
BRF1-204ENST00000392557 EDC4Q6P2E9 1401 aaKnown RBP13.64□□□□□ -0.23
BRF1-204ENST00000392557 USP19O94966 1318 aa13.64□□□□□ -0.23
BRF1-204ENST00000392557 FCHSD2O94868 740 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 181.1 ms