RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 FOSBP53539 338 aa20.53■□□□□ 0.88
TRAF3IP1-202ENST00000391993 TEX14Q8IWB6 1497 aa20.53■□□□□ 0.88
TRAF3IP1-202ENST00000391993 TSHZ3Q63HK5 1081 aa20.52■□□□□ 0.88
TRAF3IP1-202ENST00000391993 C16orf71Q8IYS4 520 aaPredicted RBP20.52■□□□□ 0.88
TRAF3IP1-202ENST00000391993 TMEM63CQ9P1W3 806 aa20.52■□□□□ 0.88
TRAF3IP1-202ENST00000391993 PRG4Q92954 1404 aaPredicted RBP20.52■□□□□ 0.88
TRAF3IP1-202ENST00000391993 CWC22Q9HCG8 908 aaKnown RBP20.52■□□□□ 0.88
TRAF3IP1-202ENST00000391993 GOLGA6L19H0YKK7 550 aa20.51■□□□□ 0.87
TRAF3IP1-202ENST00000391993 WDR63Q8IWG1 891 aa20.51■□□□□ 0.87
TRAF3IP1-202ENST00000391993 BECN2A8MW95 431 aa20.51■□□□□ 0.87
TRAF3IP1-202ENST00000391993 SNX21Q969T3 373 aa20.51■□□□□ 0.87
TRAF3IP1-202ENST00000391993 DDX54Q8TDD1 881 aaKnown RBP20.51■□□□□ 0.87
TRAF3IP1-202ENST00000391993 EHBP1L1Q8N3D4 1523 aa20.51■□□□□ 0.87
TRAF3IP1-202ENST00000391993 PLEKHH2Q8IVE3 1493 aa20.51■□□□□ 0.87
TRAF3IP1-202ENST00000391993 SUPT6HQ7KZ85 1726 aaKnown RBP20.5■□□□□ 0.87
TRAF3IP1-202ENST00000391993 SMC3Q9UQE7 1217 aa20.5■□□□□ 0.87
TRAF3IP1-202ENST00000391993 GIMAP6Q6P9H5 292 aa20.5■□□□□ 0.87
TRAF3IP1-202ENST00000391993 BICD2Q8TD16 824 aa20.49■□□□□ 0.87
TRAF3IP1-202ENST00000391993 NRDCO43847 1150 aa20.49■□□□□ 0.87
TRAF3IP1-202ENST00000391993 LETM1O95202 739 aaPredicted RBP20.49■□□□□ 0.87
TRAF3IP1-202ENST00000391993 HOMER1Q86YM7 354 aa20.49■□□□□ 0.87
TRAF3IP1-202ENST00000391993 MCM5P33992 734 aa20.49■□□□□ 0.87
TRAF3IP1-202ENST00000391993 NINLQ9Y2I6 1382 aa20.48■□□□□ 0.87
TRAF3IP1-202ENST00000391993 BMP2KLQ5H9B9 411 aa20.48■□□□□ 0.87
TRAF3IP1-202ENST00000391993 FILIP1Q7Z7B0 1213 aa20.48■□□□□ 0.87
TRAF3IP1-202ENST00000391993 GCC1Q96CN9 775 aa20.48■□□□□ 0.87
TRAF3IP1-202ENST00000391993 KIF3BO15066 747 aa20.48■□□□□ 0.87
TRAF3IP1-202ENST00000391993 MAP4K4O95819 1239 aaPredicted RBP20.48■□□□□ 0.87
TRAF3IP1-202ENST00000391993 FERMT3Q86UX7 667 aa20.48■□□□□ 0.87
TRAF3IP1-202ENST00000391993 LMBRD1Q9NUN5 540 aa20.48■□□□□ 0.87
TRAF3IP1-202ENST00000391993 TRMT1Q9NXH9 659 aaKnown RBP20.47■□□□□ 0.87
TRAF3IP1-202ENST00000391993 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.47■□□□□ 0.87
TRAF3IP1-202ENST00000391993 PRIMPOLQ96LW4 560 aa20.47■□□□□ 0.87
TRAF3IP1-202ENST00000391993 GTPBP4Q9BZE4 634 aaKnown RBP20.47■□□□□ 0.87
TRAF3IP1-202ENST00000391993 BCL2L12Q9HB09 334 aa20.47■□□□□ 0.87
TRAF3IP1-202ENST00000391993 DMTNQ08495 405 aa20.47■□□□□ 0.87
TRAF3IP1-202ENST00000391993 CERS3Q8IU89 383 aa20.47■□□□□ 0.87
TRAF3IP1-202ENST00000391993 MYRIPQ8NFW9 859 aa20.46■□□□□ 0.87
TRAF3IP1-202ENST00000391993 CABP2Q9NPB3 220 aa20.46■□□□□ 0.87
TRAF3IP1-202ENST00000391993 POLR3GO15318 223 aaPredicted RBP20.46■□□□□ 0.87
TRAF3IP1-202ENST00000391993 HMMRO75330 724 aa20.46■□□□□ 0.87
TRAF3IP1-202ENST00000391993 GTF2F1P35269 517 aaKnown RBP eCLIP20.46■□□□□ 0.87
TRAF3IP1-202ENST00000391993 PRDM4Q9UKN5 801 aa20.46■□□□□ 0.87
TRAF3IP1-202ENST00000391993 URB2Q14146 1524 aaKnown RBP20.45■□□□□ 0.86
TRAF3IP1-202ENST00000391993 RIOK3O14730 519 aaKnown RBP20.45■□□□□ 0.86
TRAF3IP1-202ENST00000391993 TNNT1P13805 278 aa20.45■□□□□ 0.86
TRAF3IP1-202ENST00000391993 NUCB1Q02818 461 aa20.45■□□□□ 0.86
TRAF3IP1-202ENST00000391993 HTATSF1O43719 755 aaKnown RBP20.45■□□□□ 0.86
TRAF3IP1-202ENST00000391993 CEBPZQ03701 1054 aaKnown RBP20.45■□□□□ 0.86
TRAF3IP1-202ENST00000391993 ZNF500O60304 480 aaPredicted RBP20.44■□□□□ 0.86
TRAF3IP1-202ENST00000391993 GGT6Q6P531 493 aa20.44■□□□□ 0.86
TRAF3IP1-202ENST00000391993 CKAP2LQ8IYA6 745 aa20.44■□□□□ 0.86
TRAF3IP1-202ENST00000391993 KDM6BO15054 1643 aa20.44■□□□□ 0.86
TRAF3IP1-202ENST00000391993 HS1BP3Q53T59 392 aa20.44■□□□□ 0.86
TRAF3IP1-202ENST00000391993 PAXIP1Q6ZW49 1069 aaPredicted RBP20.44■□□□□ 0.86
TRAF3IP1-202ENST00000391993 FMNL2Q96PY5 1086 aa20.44■□□□□ 0.86
TRAF3IP1-202ENST00000391993 DIAPH1O60610 1272 aaKnown RBP20.43■□□□□ 0.86
TRAF3IP1-202ENST00000391993 HSP90B1P14625 803 aaKnown RBP20.43■□□□□ 0.86
TRAF3IP1-202ENST00000391993 JPH4Q96JJ6 628 aa20.43■□□□□ 0.86
TRAF3IP1-202ENST00000391993 ERC2O15083 957 aa20.43■□□□□ 0.86
TRAF3IP1-202ENST00000391993 GPRASP1Q5JY77 1395 aa20.43■□□□□ 0.86
TRAF3IP1-202ENST00000391993 TMPOP42166 694 aaKnown RBP20.43■□□□□ 0.86
TRAF3IP1-202ENST00000391993 RBM25P49756 843 aaKnown RBP20.43■□□□□ 0.86
TRAF3IP1-202ENST00000391993 ZNF445P59923 1031 aa20.43■□□□□ 0.86
TRAF3IP1-202ENST00000391993 NSFL1CQ9UNZ2 370 aaKnown RBP20.43■□□□□ 0.86
TRAF3IP1-202ENST00000391993 GPT2Q8TD30 523 aa20.42■□□□□ 0.86
TRAF3IP1-202ENST00000391993 ATP6V1DQ9Y5K8 247 aa20.42■□□□□ 0.86
TRAF3IP1-202ENST00000391993 ROCK1Q13464 1354 aa20.42■□□□□ 0.86
TRAF3IP1-202ENST00000391993 PRKAR2BP31323 418 aa20.42■□□□□ 0.86
TRAF3IP1-202ENST00000391993 PDIA4P13667 645 aaKnown RBP20.42■□□□□ 0.86
TRAF3IP1-202ENST00000391993 ATP2B3Q16720 1220 aa20.42■□□□□ 0.86
TRAF3IP1-202ENST00000391993 FAM177A1Q8N128 213 aaPredicted RBP20.42■□□□□ 0.86
TRAF3IP1-202ENST00000391993 KIF20AO95235 890 aa20.41■□□□□ 0.86
TRAF3IP1-202ENST00000391993 HDAC1Q13547 482 aaPredicted RBP20.41■□□□□ 0.86
TRAF3IP1-202ENST00000391993 TERF1P54274 439 aa20.4■□□□□ 0.86
TRAF3IP1-202ENST00000391993 TMX3Q96JJ7 454 aa20.4■□□□□ 0.86
TRAF3IP1-202ENST00000391993 EPRSP07814 1512 aaKnown RBP20.4■□□□□ 0.86
TRAF3IP1-202ENST00000391993 ZMYM4Q5VZL5 1548 aa20.4■□□□□ 0.86
TRAF3IP1-202ENST00000391993 USP48Q86UV5 1035 aa20.39■□□□□ 0.86
TRAF3IP1-202ENST00000391993 EXOC6BQ9Y2D4 811 aa20.39■□□□□ 0.86
TRAF3IP1-202ENST00000391993 ZNF428Q96B54 188 aa20.39■□□□□ 0.85
TRAF3IP1-202ENST00000391993 KDM5BQ9UGL1 1544 aa20.39■□□□□ 0.85
TRAF3IP1-202ENST00000391993 GADD45BO75293 160 aaPredicted RBP20.39■□□□□ 0.85
TRAF3IP1-202ENST00000391993 OTUD7AQ8TE49 926 aaPredicted RBP20.39■□□□□ 0.85
TRAF3IP1-202ENST00000391993 ERCC6Q03468 1493 aa20.39■□□□□ 0.85
TRAF3IP1-202ENST00000391993 TRIM34Q9BYJ4 488 aa20.38■□□□□ 0.85
TRAF3IP1-202ENST00000391993 API5Q9BZZ5 524 aaKnown RBP20.38■□□□□ 0.85
TRAF3IP1-202ENST00000391993 PRDM2Q13029 1718 aa20.38■□□□□ 0.85
TRAF3IP1-202ENST00000391993 TEX35Q5T0J7 233 aa20.38■□□□□ 0.85
TRAF3IP1-202ENST00000391993 MINK1Q8N4C8 1332 aaPredicted RBP20.38■□□□□ 0.85
TRAF3IP1-202ENST00000391993 CCDC192P0DO97 292 aa20.38■□□□□ 0.85
TRAF3IP1-202ENST00000391993 FBLN1P23142 703 aa20.38■□□□□ 0.85
TRAF3IP1-202ENST00000391993 TWISTNBQ3B726 338 aaPredicted RBP20.38■□□□□ 0.85
TRAF3IP1-202ENST00000391993 CCDC186Q7Z3E2 898 aa20.38■□□□□ 0.85
TRAF3IP1-202ENST00000391993 CNPY2Q9Y2B0 182 aa20.38■□□□□ 0.85
TRAF3IP1-202ENST00000391993 RALGAPBQ86X10 1494 aa20.38■□□□□ 0.85
TRAF3IP1-202ENST00000391993 FAM184AQ8NB25 1140 aa20.37■□□□□ 0.85
TRAF3IP1-202ENST00000391993 BLMP54132 1417 aaPredicted RBP20.37■□□□□ 0.85
TRAF3IP1-202ENST00000391993 WDR33Q9C0J8 1336 aaKnown RBP20.37■□□□□ 0.85
TRAF3IP1-202ENST00000391993 PTGS1P23219 599 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms