RNA–Protein interactions for RNA: ENST00000391867.7

MRPL55-219, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-219ENST00000391867 USP21Q9UK80 565 aa18.55■□□□□ 0.56
MRPL55-219ENST00000391867 SBNO2Q9Y2G9 1366 aa18.55■□□□□ 0.56
MRPL55-219ENST00000391867 TIMELESSQ9UNS1 1208 aa18.54■□□□□ 0.56
MRPL55-219ENST00000391867 QTRT2Q9H974 415 aaKnown RBP18.53■□□□□ 0.56
MRPL55-219ENST00000391867 USP47Q96K76 1375 aa18.53■□□□□ 0.56
MRPL55-219ENST00000391867 FNBP4Q8N3X1 1017 aaPredicted RBP18.52■□□□□ 0.56
MRPL55-219ENST00000391867 RXRBP28702 533 aa18.51■□□□□ 0.55
MRPL55-219ENST00000391867 TESK2Q96S53 571 aa18.51■□□□□ 0.55
MRPL55-219ENST00000391867 ATAD2Q6PL18 1390 aa18.51■□□□□ 0.55
MRPL55-219ENST00000391867 USP6P35125 1406 aa18.5■□□□□ 0.55
MRPL55-219ENST00000391867 BCL9LQ86UU0 1499 aa18.5■□□□□ 0.55
MRPL55-219ENST00000391867 CRYBG1Q9Y4K1 1723 aa18.49■□□□□ 0.55
MRPL55-219ENST00000391867 ABTB2Q8N961 1025 aa18.49■□□□□ 0.55
MRPL55-219ENST00000391867 TMC1Q8TDI8 760 aa18.48■□□□□ 0.55
MRPL55-219ENST00000391867 SLIT2O94813 1529 aa18.48■□□□□ 0.55
MRPL55-219ENST00000391867 FAM83GA6ND36 823 aa18.47■□□□□ 0.55
MRPL55-219ENST00000391867 TRPC5Q9UL62 973 aaPredicted RBP18.47■□□□□ 0.55
MRPL55-219ENST00000391867 ATRNO75882 1429 aa18.47■□□□□ 0.55
MRPL55-219ENST00000391867 PLCH1Q4KWH8 1693 aa18.47■□□□□ 0.55
MRPL55-219ENST00000391867 RBM6P78332 1123 aaKnown RBP18.46■□□□□ 0.55
MRPL55-219ENST00000391867 PHRF1Q9P1Y6 1649 aaKnown RBP18.45■□□□□ 0.54
MRPL55-219ENST00000391867 SLC12A5Q9H2X9 1139 aa18.45■□□□□ 0.54
MRPL55-219ENST00000391867 RGS12O14924 1447 aa18.45■□□□□ 0.54
MRPL55-219ENST00000391867 AKAP12Q02952 1782 aa18.45■□□□□ 0.54
MRPL55-219ENST00000391867 SSH2Q76I76 1423 aa18.44■□□□□ 0.54
MRPL55-219ENST00000391867 ZC3H6P61129 1189 aaKnown RBP18.44■□□□□ 0.54
MRPL55-219ENST00000391867 UNC5CLQ8IV45 518 aa18.44■□□□□ 0.54
MRPL55-219ENST00000391867 KTN1Q86UP2 1357 aaKnown RBP18.43■□□□□ 0.54
MRPL55-219ENST00000391867 KIAA0232Q92628 1395 aa18.43■□□□□ 0.54
MRPL55-219ENST00000391867 CPSF1Q10570 1443 aaKnown RBP18.43■□□□□ 0.54
MRPL55-219ENST00000391867 CHRNA2Q15822 529 aa18.43■□□□□ 0.54
MRPL55-219ENST00000391867 PRDM11Q9NQV5 511 aa18.43■□□□□ 0.54
MRPL55-219ENST00000391867 CD163L1Q9NR16 1453 aa18.43■□□□□ 0.54
MRPL55-219ENST00000391867 NRKQ7Z2Y5 1582 aa18.42■□□□□ 0.54
MRPL55-219ENST00000391867 PIK3C2AO00443 1686 aa18.42■□□□□ 0.54
MRPL55-219ENST00000391867 NLRP6P59044 892 aa18.42■□□□□ 0.54
MRPL55-219ENST00000391867 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.42■□□□□ 0.54
MRPL55-219ENST00000391867 USP19O94966 1318 aa18.42■□□□□ 0.54
MRPL55-219ENST00000391867 TTC21BQ7Z4L5 1316 aa18.42■□□□□ 0.54
MRPL55-219ENST00000391867 NLRP13Q86W25 1043 aa18.41■□□□□ 0.54
MRPL55-219ENST00000391867 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.41■□□□□ 0.54
MRPL55-219ENST00000391867 ZNF692Q9BU19 519 aaPredicted RBP18.41■□□□□ 0.54
MRPL55-219ENST00000391867 BTG4Q9NY30 223 aa18.41■□□□□ 0.54
MRPL55-219ENST00000391867 CCDC9Q9Y3X0 531 aaKnown RBP18.41■□□□□ 0.54
MRPL55-219ENST00000391867 BRD4O60885 1362 aaPredicted RBP18.41■□□□□ 0.54
MRPL55-219ENST00000391867 MON2Q7Z3U7 1717 aa18.4■□□□□ 0.54
MRPL55-219ENST00000391867 CDK12Q9NYV4 1490 aaPredicted RBP18.4■□□□□ 0.54
MRPL55-219ENST00000391867 COL14A1Q05707 1796 aaKnown RBP18.4■□□□□ 0.54
MRPL55-219ENST00000391867 TMF1P82094 1093 aa18.4■□□□□ 0.54
MRPL55-219ENST00000391867 GJD4Q96KN9 370 aaPredicted RBP18.4■□□□□ 0.54
MRPL55-219ENST00000391867 NWD2Q9ULI1 1742 aa18.4■□□□□ 0.54
MRPL55-219ENST00000391867 ZBTB7CA1YPR0 619 aa18.39■□□□□ 0.53
MRPL55-219ENST00000391867 A0A1W2PP64 1363 aa18.39■□□□□ 0.53
MRPL55-219ENST00000391867 GLI3P10071 1580 aa18.38■□□□□ 0.53
MRPL55-219ENST00000391867 NRAPQ86VF7 1730 aa18.38■□□□□ 0.53
MRPL55-219ENST00000391867 SOX12O15370 315 aa18.38■□□□□ 0.53
MRPL55-219ENST00000391867 GCP02774 474 aa18.38■□□□□ 0.53
MRPL55-219ENST00000391867 HDGFL2Q7Z4V5 671 aaPredicted RBP18.38■□□□□ 0.53
MRPL55-219ENST00000391867 ZRANB1Q9UGI0 708 aa18.38■□□□□ 0.53
MRPL55-219ENST00000391867 PUS7Q96PZ0 661 aaKnown RBP18.37■□□□□ 0.53
MRPL55-219ENST00000391867 VPS72Q15906 364 aa18.36■□□□□ 0.53
MRPL55-219ENST00000391867 NME9Q86XW9 330 aa18.36■□□□□ 0.53
MRPL55-219ENST00000391867 TTC21AQ8NDW8 1320 aa18.36■□□□□ 0.53
MRPL55-219ENST00000391867 TERF2IPQ9NYB0 399 aa18.36■□□□□ 0.53
MRPL55-219ENST00000391867 SLIT3O75094 1523 aa18.35■□□□□ 0.53
MRPL55-219ENST00000391867 STRN4Q9NRL3 753 aa18.35■□□□□ 0.53
MRPL55-219ENST00000391867 SLC24A1O60721 1099 aa18.34■□□□□ 0.53
MRPL55-219ENST00000391867 HSPA5P11021 654 aaKnown RBP18.34■□□□□ 0.53
MRPL55-219ENST00000391867 CPDO75976 1380 aa18.33■□□□□ 0.53
MRPL55-219ENST00000391867 EIF4G2P78344 907 aaKnown RBP eCLIP18.33■□□□□ 0.52
MRPL55-219ENST00000391867 EDC4Q6P2E9 1401 aaKnown RBP18.32■□□□□ 0.52
MRPL55-219ENST00000391867 NINLQ9Y2I6 1382 aa18.32■□□□□ 0.52
MRPL55-219ENST00000391867 POLR3GLQ9BT43 218 aa18.32■□□□□ 0.52
MRPL55-219ENST00000391867 CAMTA1Q9Y6Y1 1673 aa18.31■□□□□ 0.52
MRPL55-219ENST00000391867 A0A0G2JS52 829 aa18.3■□□□□ 0.52
MRPL55-219ENST00000391867 MYT1Q01538 1121 aa18.3■□□□□ 0.52
MRPL55-219ENST00000391867 CDCA8Q53HL2 280 aa18.3■□□□□ 0.52
MRPL55-219ENST00000391867 LMO7Q8WWI1 1683 aa18.3■□□□□ 0.52
MRPL55-219ENST00000391867 ANKRD36BQ8N2N9 1353 aa18.3■□□□□ 0.52
MRPL55-219ENST00000391867 SPATA31A5Q5VU36 1347 aa18.29■□□□□ 0.52
MRPL55-219ENST00000391867 SPATA31A7Q8IWB4 1347 aa18.29■□□□□ 0.52
MRPL55-219ENST00000391867 EVA1CP58658 441 aa18.29■□□□□ 0.52
MRPL55-219ENST00000391867 FAM98CQ17RN3 349 aaKnown RBP18.29■□□□□ 0.52
MRPL55-219ENST00000391867 SEPT12Q8IYM1 358 aa18.29■□□□□ 0.52
MRPL55-219ENST00000391867 MYOM1P52179 1685 aa18.28■□□□□ 0.52
MRPL55-219ENST00000391867 USP35Q9P2H5 1018 aa18.28■□□□□ 0.52
MRPL55-219ENST00000391867 USP31Q70CQ4 1352 aa18.28■□□□□ 0.52
MRPL55-219ENST00000391867 NFAT5O94916 1531 aa18.28■□□□□ 0.52
MRPL55-219ENST00000391867 LARP1Q6PKG0 1096 aaKnown RBP18.27■□□□□ 0.52
MRPL55-219ENST00000391867 KCNH5Q8NCM2 988 aa18.27■□□□□ 0.52
MRPL55-219ENST00000391867 UPF1Q92900 1129 aaKnown RBP eCLIP18.27■□□□□ 0.52
MRPL55-219ENST00000391867 AATKQ6ZMQ8 1374 aa18.26■□□□□ 0.51
MRPL55-219ENST00000391867 COL5A2P05997 1499 aaPredicted RBP18.26■□□□□ 0.51
MRPL55-219ENST00000391867 BRWD3Q6RI45 1802 aa18.26■□□□□ 0.51
MRPL55-219ENST00000391867 SPATA31A1Q5TZJ5 1347 aa18.25■□□□□ 0.51
MRPL55-219ENST00000391867 ARHGEF25Q86VW2 580 aa18.25■□□□□ 0.51
MRPL55-219ENST00000391867 AXIN2Q9Y2T1 843 aa18.25■□□□□ 0.51
MRPL55-219ENST00000391867 USP54Q70EL1 1684 aa18.25■□□□□ 0.51
MRPL55-219ENST00000391867 OVOS2A0A0J9YW53 1432 aa18.24■□□□□ 0.51
MRPL55-219ENST00000391867 OVOS2Q6IE36 1432 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms