RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 BEGAINQ9BUH8 593 aa5.26□□□□□ -1.57
SNORA40.19-201ENST00000390846 LIMD1Q9UGP4 676 aa5.26□□□□□ -1.57
SNORA40.19-201ENST00000390846 NR3C2P08235 984 aa5.25□□□□□ -1.57
SNORA40.19-201ENST00000390846 TIMP2P16035 220 aa5.25□□□□□ -1.57
SNORA40.19-201ENST00000390846 GRM5P41594 1212 aa5.25□□□□□ -1.57
SNORA40.19-201ENST00000390846 MTMR2Q13614 643 aa5.25□□□□□ -1.57
SNORA40.19-201ENST00000390846 CABLES1Q8TDN4 633 aa5.25□□□□□ -1.57
SNORA40.19-201ENST00000390846 CDK15Q96Q40 435 aa5.25□□□□□ -1.57
SNORA40.19-201ENST00000390846 MAP10Q9P2G4 905 aa5.25□□□□□ -1.57
SNORA40.19-201ENST00000390846 H3BM21 787 aa5.24□□□□□ -1.57
SNORA40.19-201ENST00000390846 CAPN5O15484 640 aaPredicted RBP5.24□□□□□ -1.57
SNORA40.19-201ENST00000390846 GMPRP36959 345 aa5.24□□□□□ -1.57
SNORA40.19-201ENST00000390846 QPCTQ16769 361 aa5.24□□□□□ -1.57
SNORA40.19-201ENST00000390846 EHBP1Q8NDI1 1231 aa5.24□□□□□ -1.57
SNORA40.19-201ENST00000390846 ZFP42Q96MM3 310 aa5.24□□□□□ -1.57
SNORA40.19-201ENST00000390846 VEGFBP49765 207 aa5.23□□□□□ -1.57
SNORA40.19-201ENST00000390846 SH3RF1Q7Z6J0 888 aa5.23□□□□□ -1.57
SNORA40.19-201ENST00000390846 SENP2Q9HC62 589 aa5.23□□□□□ -1.57
SNORA40.19-201ENST00000390846 SOBPA7XYQ1 873 aa5.22□□□□□ -1.57
SNORA40.19-201ENST00000390846 LILRB3O75022 631 aa5.22□□□□□ -1.57
SNORA40.19-201ENST00000390846 VARSP26640 1264 aaKnown RBP5.22□□□□□ -1.57
SNORA40.19-201ENST00000390846 NNTQ13423 1086 aa5.22□□□□□ -1.57
SNORA40.19-201ENST00000390846 RTL5Q5HYW3 569 aaPredicted RBP5.22□□□□□ -1.57
SNORA40.19-201ENST00000390846 MYSM1Q5VVJ2 828 aa5.22□□□□□ -1.57
SNORA40.19-201ENST00000390846 KIFC2Q96AC6 838 aa5.22□□□□□ -1.57
SNORA40.19-201ENST00000390846 C1QTNF2Q9BXJ5 285 aa5.22□□□□□ -1.57
SNORA40.19-201ENST00000390846 NXF1Q9UBU9 619 aaKnown RBP5.22□□□□□ -1.57
SNORA40.19-201ENST00000390846 GSK3AP49840 483 aa5.21□□□□□ -1.58
SNORA40.19-201ENST00000390846 TUSC1Q2TAM9 212 aa5.21□□□□□ -1.58
SNORA40.19-201ENST00000390846 RIC3Q7Z5B4 369 aa5.21□□□□□ -1.58
SNORA40.19-201ENST00000390846 OCSTAMPQ9BR26 566 aa5.21□□□□□ -1.58
SNORA40.19-201ENST00000390846 STK17AQ9UEE5 414 aa5.21□□□□□ -1.58
SNORA40.19-201ENST00000390846 SPDYE5A6NIY4 337 aa5.2□□□□□ -1.58
SNORA40.19-201ENST00000390846 SLC24A1O60721 1099 aa5.2□□□□□ -1.58
SNORA40.19-201ENST00000390846 TTLL12Q14166 644 aaPredicted RBP5.2□□□□□ -1.58
SNORA40.19-201ENST00000390846 PRPF38BQ5VTL8 546 aaKnown RBP5.2□□□□□ -1.58
SNORA40.19-201ENST00000390846 KRI1Q8N9T8 703 aaKnown RBP5.2□□□□□ -1.58
SNORA40.19-201ENST00000390846 ZFAND3Q9H8U3 227 aa5.2□□□□□ -1.58
SNORA40.19-201ENST00000390846 ADH1CP00326 375 aa5.19□□□□□ -1.58
SNORA40.19-201ENST00000390846 VSIG8P0DPA2 414 aa5.19□□□□□ -1.58
SNORA40.19-201ENST00000390846 MRPL14Q6P1L8 145 aaKnown RBP5.19□□□□□ -1.58
SNORA40.19-201ENST00000390846 SH3BP5LQ7L8J4 393 aa5.19□□□□□ -1.58
SNORA40.19-201ENST00000390846 NPAS3Q8IXF0 933 aa5.19□□□□□ -1.58
SNORA40.19-201ENST00000390846 ITPKCQ96DU7 683 aa5.19□□□□□ -1.58
SNORA40.19-201ENST00000390846 PDE4DQ08499 809 aa5.18□□□□□ -1.58
SNORA40.19-201ENST00000390846 AK7Q96M32 723 aa5.18□□□□□ -1.58
SNORA40.19-201ENST00000390846 KRT76Q01546 638 aa5.17□□□□□ -1.58
SNORA40.19-201ENST00000390846 PURBQ96QR8 312 aaKnown RBP5.17□□□□□ -1.58
SNORA40.19-201ENST00000390846 ZBTB3Q9H5J0 574 aa5.17□□□□□ -1.58
SNORA40.19-201ENST00000390846 WASF2Q9Y6W5 498 aa5.17□□□□□ -1.58
SNORA40.19-201ENST00000390846 TULP1O00294 542 aaPredicted RBP5.16□□□□□ -1.58
SNORA40.19-201ENST00000390846 WDR4P57081 412 aaKnown RBP5.16□□□□□ -1.58
SNORA40.19-201ENST00000390846 GPR161Q8N6U8 529 aaKnown RBP5.16□□□□□ -1.58
SNORA40.19-201ENST00000390846 SLC24A3Q9HC58 644 aa5.16□□□□□ -1.58
SNORA40.19-201ENST00000390846 INSM1Q01101 510 aaPredicted RBP5.15□□□□□ -1.59
SNORA40.19-201ENST00000390846 TRMT44Q8IYL2 757 aaKnown RBP5.15□□□□□ -1.59
SNORA40.19-201ENST00000390846 SOS2Q07890 1332 aaPredicted RBP5.15□□□□□ -1.59
SNORA40.19-201ENST00000390846 LOC100996750A0A140TA64 210 aa5.14□□□□□ -1.59
SNORA40.19-201ENST00000390846 ZIC2O95409 532 aaPredicted RBP5.14□□□□□ -1.59
SNORA40.19-201ENST00000390846 CTDSPL2Q05D32 466 aa5.14□□□□□ -1.59
SNORA40.19-201ENST00000390846 MEIOBQ8N635 442 aa5.14□□□□□ -1.59
SNORA40.19-201ENST00000390846 KRTAP4-6Q9BYQ5 205 aa5.14□□□□□ -1.59
SNORA40.19-201ENST00000390846 DNMT3LQ9UJW3 386 aa5.14□□□□□ -1.59
SNORA40.19-201ENST00000390846 CTHP32929 405 aa5.13□□□□□ -1.59
SNORA40.19-201ENST00000390846 NR5A1Q13285 461 aa5.13□□□□□ -1.59
SNORA40.19-201ENST00000390846 CSPP1Q1MSJ5 1256 aa5.13□□□□□ -1.59
SNORA40.19-201ENST00000390846 KDF1Q8NAX2 398 aaPredicted RBP5.13□□□□□ -1.59
SNORA40.19-201ENST00000390846 FAM174AQ8TBP5 190 aa5.13□□□□□ -1.59
SNORA40.19-201ENST00000390846 PLEKHG3A1L390 1219 aa5.12□□□□□ -1.59
SNORA40.19-201ENST00000390846 PPFIA3O75145 1194 aa5.12□□□□□ -1.59
SNORA40.19-201ENST00000390846 ZSCAN1Q8NBB4 408 aa5.12□□□□□ -1.59
SNORA40.19-201ENST00000390846 PROCA1Q8NCQ7 364 aaPredicted RBP5.12□□□□□ -1.59
SNORA40.19-201ENST00000390846 IRF7Q92985 503 aa5.12□□□□□ -1.59
SNORA40.19-201ENST00000390846 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.12□□□□□ -1.59
SNORA40.19-201ENST00000390846 MAP4K5Q9Y4K4 846 aa5.12□□□□□ -1.59
SNORA40.19-201ENST00000390846 DIXDC1Q155Q3 683 aa5.11□□□□□ -1.59
SNORA40.19-201ENST00000390846 ERFEQ4G0M1 354 aa5.11□□□□□ -1.59
SNORA40.19-201ENST00000390846 Q6ZVU0 165 aa5.11□□□□□ -1.59
SNORA40.19-201ENST00000390846 EPS8L1Q8TE68 723 aa5.11□□□□□ -1.59
SNORA40.19-201ENST00000390846 LRRN4Q8WUT4 740 aa5.11□□□□□ -1.59
SNORA40.19-201ENST00000390846 LINC00528Q8N1L1 170 aa5.1□□□□□ -1.59
SNORA40.19-201ENST00000390846 CLK2P49760 499 aaKnown RBP5.09□□□□□ -1.59
SNORA40.19-201ENST00000390846 CBLBQ13191 982 aa5.09□□□□□ -1.59
SNORA40.19-201ENST00000390846 PPP2R2DQ66LE6 453 aa5.09□□□□□ -1.59
SNORA40.19-201ENST00000390846 BPHLQ86WA6 291 aaPredicted RBP5.09□□□□□ -1.59
SNORA40.19-201ENST00000390846 SLC16A10Q8TF71 515 aa5.09□□□□□ -1.59
SNORA40.19-201ENST00000390846 POLR3EQ9NVU0 708 aa5.09□□□□□ -1.59
SNORA40.19-201ENST00000390846 FSHRP23945 695 aa5.08□□□□□ -1.6
SNORA40.19-201ENST00000390846 ARID5BQ14865 1188 aa5.08□□□□□ -1.6
SNORA40.19-201ENST00000390846 C6orf118Q5T5N4 469 aa5.08□□□□□ -1.6
SNORA40.19-201ENST00000390846 FAM117AQ9C073 453 aa5.08□□□□□ -1.6
SNORA40.19-201ENST00000390846 HMX1Q9NP08 348 aaPredicted RBP5.08□□□□□ -1.6
SNORA40.19-201ENST00000390846 SENP3-EIF4A1A0A087X0R7 540 aa5.07□□□□□ -1.6
SNORA40.19-201ENST00000390846 RNFT1Q5M7Z0 435 aa5.07□□□□□ -1.6
SNORA40.19-201ENST00000390846 GPBP1L1Q9HC44 474 aaPredicted RBP5.07□□□□□ -1.6
SNORA40.19-201ENST00000390846 SLC35F4A4IF30 521 aa5.06□□□□□ -1.6
SNORA40.19-201ENST00000390846 SPINT1O43278 529 aa5.06□□□□□ -1.6
SNORA40.19-201ENST00000390846 GPR37L1O60883 481 aa5.06□□□□□ -1.6
SNORA40.19-201ENST00000390846 LILRA1O75019 489 aa5.06□□□□□ -1.6
SNORA40.19-201ENST00000390846 ADD1P35611 737 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms