RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 MAN1A1P33908 653 aa4.35□□□□□ -1.71
TRAJ17-201ENST00000390520 HDLBPQ00341 1268 aaKnown RBP4.35□□□□□ -1.71
TRAJ17-201ENST00000390520 RBL2Q08999 1139 aa4.35□□□□□ -1.71
TRAJ17-201ENST00000390520 RAD51AP2Q09MP3 1159 aa4.35□□□□□ -1.71
TRAJ17-201ENST00000390520 HDAC1Q13547 482 aaPredicted RBP4.35□□□□□ -1.71
TRAJ17-201ENST00000390520 PUS10Q3MIT2 529 aaKnown RBP4.35□□□□□ -1.71
TRAJ17-201ENST00000390520 HDGFL1Q5TGJ6 251 aa4.35□□□□□ -1.71
TRAJ17-201ENST00000390520 PHLDB3Q6NSJ2 640 aa4.35□□□□□ -1.71
TRAJ17-201ENST00000390520 DDX46Q7L014 1031 aaKnown RBP4.35□□□□□ -1.71
TRAJ17-201ENST00000390520 MSL3Q8N5Y2 521 aaKnown RBP4.35□□□□□ -1.71
TRAJ17-201ENST00000390520 OTUD6BQ8N6M0 293 aa4.35□□□□□ -1.71
TRAJ17-201ENST00000390520 MTMR14Q8NCE2 650 aa4.35□□□□□ -1.71
TRAJ17-201ENST00000390520 CEP63Q96MT8 703 aa4.35□□□□□ -1.71
TRAJ17-201ENST00000390520 TINF2Q9BSI4 451 aa4.35□□□□□ -1.71
TRAJ17-201ENST00000390520 INO80BQ9C086 356 aaPredicted RBP4.35□□□□□ -1.71
TRAJ17-201ENST00000390520 NLRP2Q9NX02 1062 aa4.35□□□□□ -1.71
TRAJ17-201ENST00000390520 DDX56Q9NY93 547 aaKnown RBP4.35□□□□□ -1.71
TRAJ17-201ENST00000390520 GOLGA6AQ9NYA3 693 aa4.35□□□□□ -1.71
TRAJ17-201ENST00000390520 MAP3K20Q9NYL2 800 aaKnown RBP4.35□□□□□ -1.71
TRAJ17-201ENST00000390520 CEP126Q9P2H0 1117 aa4.35□□□□□ -1.71
TRAJ17-201ENST00000390520 SCAMP3O14828 347 aaKnown RBP4.34□□□□□ -1.71
TRAJ17-201ENST00000390520 DHX16O60231 1041 aaKnown RBP4.34□□□□□ -1.71
TRAJ17-201ENST00000390520 FGAP02671 866 aa4.34□□□□□ -1.71
TRAJ17-201ENST00000390520 S100BP04271 92 aaPredicted RBP4.34□□□□□ -1.71
TRAJ17-201ENST00000390520 VDRP11473 427 aa4.34□□□□□ -1.71
TRAJ17-201ENST00000390520 ATP2B1P20020 1258 aa4.34□□□□□ -1.71
TRAJ17-201ENST00000390520 ABL2P42684 1182 aa4.34□□□□□ -1.71
TRAJ17-201ENST00000390520 CNGB1Q14028 1251 aaPredicted RBP4.34□□□□□ -1.71
TRAJ17-201ENST00000390520 UBE4AQ14139 1066 aa4.34□□□□□ -1.71
TRAJ17-201ENST00000390520 TSNAXIP1Q2TAA8 658 aa4.34□□□□□ -1.71
TRAJ17-201ENST00000390520 TMEM259Q4ZIN3 620 aa4.34□□□□□ -1.71
TRAJ17-201ENST00000390520 ARMCX6Q7L4S7 300 aa4.34□□□□□ -1.71
TRAJ17-201ENST00000390520 JAZF1Q86VZ6 243 aa4.34□□□□□ -1.71
TRAJ17-201ENST00000390520 FMNL3Q8IVF7 1028 aa4.34□□□□□ -1.71
TRAJ17-201ENST00000390520 TRIM44Q96DX7 344 aaPredicted RBP4.34□□□□□ -1.71
TRAJ17-201ENST00000390520 IL17RAQ96F46 866 aa4.34□□□□□ -1.71
TRAJ17-201ENST00000390520 DDX27Q96GQ7 796 aaKnown RBP4.34□□□□□ -1.71
TRAJ17-201ENST00000390520 ZNF512BQ96KM6 892 aaPredicted RBP4.34□□□□□ -1.71
TRAJ17-201ENST00000390520 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.34□□□□□ -1.71
TRAJ17-201ENST00000390520 PAGR1Q9BTK6 254 aa4.34□□□□□ -1.71
TRAJ17-201ENST00000390520 REPIN1Q9BWE0 567 aaKnown RBP4.34□□□□□ -1.71
TRAJ17-201ENST00000390520 MFRPQ9BY79 579 aa4.34□□□□□ -1.71
TRAJ17-201ENST00000390520 IFT57Q9NWB7 429 aa4.34□□□□□ -1.71
TRAJ17-201ENST00000390520 G3BP2Q9UN86 482 aaKnown RBP4.34□□□□□ -1.71
TRAJ17-201ENST00000390520 SSUH2Q9Y2M2 353 aa4.34□□□□□ -1.71
TRAJ17-201ENST00000390520 ERBB3P21860 1342 aa4.34□□□□□ -1.71
TRAJ17-201ENST00000390520 PALM3A6NDB9 673 aaPredicted RBP4.33□□□□□ -1.72
TRAJ17-201ENST00000390520 PPP1R37O75864 691 aa4.33□□□□□ -1.72
TRAJ17-201ENST00000390520 COL6A1P12109 1028 aa4.33□□□□□ -1.72
TRAJ17-201ENST00000390520 CD53P19397 219 aa4.33□□□□□ -1.72
TRAJ17-201ENST00000390520 SCP2P22307 547 aa4.33□□□□□ -1.72
TRAJ17-201ENST00000390520 RFC5P40937 340 aa4.33□□□□□ -1.72
TRAJ17-201ENST00000390520 TAGLNQ01995 201 aaKnown RBP4.33□□□□□ -1.72
TRAJ17-201ENST00000390520 RASSF7Q02833 373 aa4.33□□□□□ -1.72
TRAJ17-201ENST00000390520 POU5F1BQ06416 359 aa4.33□□□□□ -1.72
TRAJ17-201ENST00000390520 EFCAB2Q5VUJ9 269 aa4.33□□□□□ -1.72
TRAJ17-201ENST00000390520 NT5DC4Q86YG4 428 aa4.33□□□□□ -1.72
TRAJ17-201ENST00000390520 C1orf131Q8NDD1 294 aaKnown RBP4.33□□□□□ -1.72
TRAJ17-201ENST00000390520 SLC39A13Q96H72 371 aa4.33□□□□□ -1.72
TRAJ17-201ENST00000390520 C8orf48Q96LL4 319 aa4.33□□□□□ -1.72
TRAJ17-201ENST00000390520 STAC3Q96MF2 364 aa4.33□□□□□ -1.72
TRAJ17-201ENST00000390520 GMLQ99445 158 aa4.33□□□□□ -1.72
TRAJ17-201ENST00000390520 LARP6Q9BRS8 491 aaKnown RBP4.33□□□□□ -1.72
TRAJ17-201ENST00000390520 TMUB1Q9BVT8 246 aa4.33□□□□□ -1.72
TRAJ17-201ENST00000390520 BACH2Q9BYV9 841 aa4.33□□□□□ -1.72
TRAJ17-201ENST00000390520 PDZRN3Q9UPQ7 1066 aa4.33□□□□□ -1.72
TRAJ17-201ENST00000390520 TBC1D2BQ9UPU7 963 aa4.33□□□□□ -1.72
TRAJ17-201ENST00000390520 BICDL2A1A5D9 508 aa4.32□□□□□ -1.72
TRAJ17-201ENST00000390520 GNPATO15228 680 aa4.32□□□□□ -1.72
TRAJ17-201ENST00000390520 GIGYF1O75420 1035 aaPredicted RBP4.32□□□□□ -1.72
TRAJ17-201ENST00000390520 FAM200BP0CF97 657 aa4.32□□□□□ -1.72
TRAJ17-201ENST00000390520 DHX8Q14562 1220 aaKnown RBP4.32□□□□□ -1.72
TRAJ17-201ENST00000390520 BMS1Q14692 1282 aaKnown RBP4.32□□□□□ -1.72
TRAJ17-201ENST00000390520 MAPRE1Q15691 268 aaKnown RBP4.32□□□□□ -1.72
TRAJ17-201ENST00000390520 NBPF9Q3BBW0 867 aa4.32□□□□□ -1.72
TRAJ17-201ENST00000390520 TBC1D10BQ4KMP7 808 aaPredicted RBP4.32□□□□□ -1.72
TRAJ17-201ENST00000390520 LDLRAD1Q5T700 205 aa4.32□□□□□ -1.72
TRAJ17-201ENST00000390520 CCSAPQ6IQ19 270 aaPredicted RBP4.32□□□□□ -1.72
TRAJ17-201ENST00000390520 CREBRFQ8IUR6 639 aa4.32□□□□□ -1.72
TRAJ17-201ENST00000390520 SVIPQ8NHG7 77 aa4.32□□□□□ -1.72
TRAJ17-201ENST00000390520 NAP1L4Q99733 375 aaKnown RBP4.32□□□□□ -1.72
TRAJ17-201ENST00000390520 PCGF6Q9BYE7 350 aa4.32□□□□□ -1.72
TRAJ17-201ENST00000390520 TMX4Q9H1E5 349 aaPredicted RBP4.32□□□□□ -1.72
TRAJ17-201ENST00000390520 RSPH9Q9H1X1 276 aaPredicted RBP4.32□□□□□ -1.72
TRAJ17-201ENST00000390520 ZSWIM4Q9H7M6 989 aa4.32□□□□□ -1.72
TRAJ17-201ENST00000390520 CASS4Q9NQ75 786 aa4.32□□□□□ -1.72
TRAJ17-201ENST00000390520 SFMBT1Q9UHJ3 866 aa4.32□□□□□ -1.72
TRAJ17-201ENST00000390520 TCEAL9Q9UHQ7 104 aa4.32□□□□□ -1.72
TRAJ17-201ENST00000390520 PDE4AP27815 886 aa4.31□□□□□ -1.72
TRAJ17-201ENST00000390520 LMOD1P29536 600 aaPredicted RBP4.31□□□□□ -1.72
TRAJ17-201ENST00000390520 GTF2F1P35269 517 aaKnown RBP eCLIP4.31□□□□□ -1.72
TRAJ17-201ENST00000390520 LMOD3Q0VAK6 560 aa4.31□□□□□ -1.72
TRAJ17-201ENST00000390520 SF3B2Q13435 895 aaKnown RBP4.31□□□□□ -1.72
TRAJ17-201ENST00000390520 CCDC184Q52MB2 194 aa4.31□□□□□ -1.72
TRAJ17-201ENST00000390520 SOGA3Q5TF21 947 aa4.31□□□□□ -1.72
TRAJ17-201ENST00000390520 C9orf131Q5VYM1 1079 aa4.31□□□□□ -1.72
TRAJ17-201ENST00000390520 FILIP1Q7Z7B0 1213 aa4.31□□□□□ -1.72
TRAJ17-201ENST00000390520 RELTQ969Z4 430 aa4.31□□□□□ -1.72
TRAJ17-201ENST00000390520 PRM3Q9NNZ6 103 aa4.31□□□□□ -1.72
TRAJ17-201ENST00000390520 TYW1Q9NV66 732 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms