RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 PTCRAQ6ISU1 281 aaPredicted RBP5.32□□□□□ -1.56
RNU6-541P-201ENST00000384709 TRIM67Q6ZTA4 783 aa5.32□□□□□ -1.56
RNU6-541P-201ENST00000384709 HELBQ8NG08 1087 aaPredicted RBP5.32□□□□□ -1.56
RNU6-541P-201ENST00000384709 GDF9O60383 454 aa5.31□□□□□ -1.56
RNU6-541P-201ENST00000384709 CD2BP2O95400 341 aaKnown RBP5.31□□□□□ -1.56
RNU6-541P-201ENST00000384709 WNT7BP56706 349 aa5.31□□□□□ -1.56
RNU6-541P-201ENST00000384709 TRIM32Q13049 653 aa5.31□□□□□ -1.56
RNU6-541P-201ENST00000384709 ZBTB24O43167 697 aaPredicted RBP5.3□□□□□ -1.56
RNU6-541P-201ENST00000384709 WIPF1O43516 503 aa5.3□□□□□ -1.56
RNU6-541P-201ENST00000384709 WFS1O76024 890 aa5.3□□□□□ -1.56
RNU6-541P-201ENST00000384709 KRTAP1-3Q8IUG1 177 aa5.3□□□□□ -1.56
RNU6-541P-201ENST00000384709 UNC93B1Q9H1C4 597 aa5.3□□□□□ -1.56
RNU6-541P-201ENST00000384709 PKD2L1Q9P0L9 805 aa5.3□□□□□ -1.56
RNU6-541P-201ENST00000384709 WNT7AO00755 349 aa5.29□□□□□ -1.56
RNU6-541P-201ENST00000384709 SKOR1P84550 965 aa5.29□□□□□ -1.56
RNU6-541P-201ENST00000384709 ZNF697Q5TEC3 545 aa5.29□□□□□ -1.56
RNU6-541P-201ENST00000384709 GPKOWQ92917 476 aaPredicted RBP eCLIP5.29□□□□□ -1.56
RNU6-541P-201ENST00000384709 ZC3H4Q9UPT8 1303 aaKnown RBP5.28□□□□□ -1.56
RNU6-541P-201ENST00000384709 USP17L8P0C7I0 530 aa5.28□□□□□ -1.56
RNU6-541P-201ENST00000384709 CCDC24Q8N4L8 307 aa5.28□□□□□ -1.56
RNU6-541P-201ENST00000384709 MPNDQ8N594 471 aa5.28□□□□□ -1.56
RNU6-541P-201ENST00000384709 ARMC2Q8NEN0 867 aa5.28□□□□□ -1.56
RNU6-541P-201ENST00000384709 MAP10Q9P2G4 905 aa5.28□□□□□ -1.56
RNU6-541P-201ENST00000384709 SIAH2O43255 324 aa5.27□□□□□ -1.57
RNU6-541P-201ENST00000384709 SH3BP2P78314 561 aa5.27□□□□□ -1.57
RNU6-541P-201ENST00000384709 XP32Q5T750 250 aa5.27□□□□□ -1.57
RNU6-541P-201ENST00000384709 SH3RF1Q7Z6J0 888 aa5.27□□□□□ -1.57
RNU6-541P-201ENST00000384709 LRRN4Q8WUT4 740 aa5.27□□□□□ -1.57
RNU6-541P-201ENST00000384709 GJD4Q96KN9 370 aaPredicted RBP5.27□□□□□ -1.57
RNU6-541P-201ENST00000384709 TOR4AQ9NXH8 423 aa5.27□□□□□ -1.57
RNU6-541P-201ENST00000384709 PDZRN3Q9UPQ7 1066 aa5.27□□□□□ -1.57
RNU6-541P-201ENST00000384709 AP1G2O75843 785 aa5.26□□□□□ -1.57
RNU6-541P-201ENST00000384709 ZNF511Q8NB15 262 aa5.26□□□□□ -1.57
RNU6-541P-201ENST00000384709 TRIM34Q9BYJ4 488 aa5.26□□□□□ -1.57
RNU6-541P-201ENST00000384709 CTHP32929 405 aa5.25□□□□□ -1.57
RNU6-541P-201ENST00000384709 PDXDC2PQ6P474 469 aa5.25□□□□□ -1.57
RNU6-541P-201ENST00000384709 SH3BP5LQ7L8J4 393 aa5.25□□□□□ -1.57
RNU6-541P-201ENST00000384709 BAP1Q92560 729 aa5.25□□□□□ -1.57
RNU6-541P-201ENST00000384709 HMX1Q9NP08 348 aaPredicted RBP5.25□□□□□ -1.57
RNU6-541P-201ENST00000384709 GPR37L1O60883 481 aa5.24□□□□□ -1.57
RNU6-541P-201ENST00000384709 VARSP26640 1264 aaKnown RBP5.24□□□□□ -1.57
RNU6-541P-201ENST00000384709 NR6A1Q15406 480 aa5.24□□□□□ -1.57
RNU6-541P-201ENST00000384709 RC3H1Q5TC82 1133 aaKnown RBP5.24□□□□□ -1.57
RNU6-541P-201ENST00000384709 MTMR14Q8NCE2 650 aa5.24□□□□□ -1.57
RNU6-541P-201ENST00000384709 EPS8L1Q8TE68 723 aa5.24□□□□□ -1.57
RNU6-541P-201ENST00000384709 TSC1Q92574 1164 aa5.24□□□□□ -1.57
RNU6-541P-201ENST00000384709 C1QTNF2Q9BXJ5 285 aa5.24□□□□□ -1.57
RNU6-541P-201ENST00000384709 FKBPLQ9UIM3 349 aa5.24□□□□□ -1.57
RNU6-541P-201ENST00000384709 GPSM3Q9Y4H4 160 aa5.24□□□□□ -1.57
RNU6-541P-201ENST00000384709 C4orf48Q5BLP8 95 aa5.23□□□□□ -1.57
RNU6-541P-201ENST00000384709 NBPF14Q5TI25 921 aa5.23□□□□□ -1.57
RNU6-541P-201ENST00000384709 TRMT44Q8IYL2 757 aaKnown RBP5.23□□□□□ -1.57
RNU6-541P-201ENST00000384709 MRGPRX2Q96LB1 330 aa5.23□□□□□ -1.57
RNU6-541P-201ENST00000384709 CDK15Q96Q40 435 aa5.23□□□□□ -1.57
RNU6-541P-201ENST00000384709 AVPP01185 164 aa5.22□□□□□ -1.57
RNU6-541P-201ENST00000384709 MYT1Q01538 1121 aa5.22□□□□□ -1.57
RNU6-541P-201ENST00000384709 SNIP1Q8TAD8 396 aaKnown RBP5.22□□□□□ -1.57
RNU6-541P-201ENST00000384709 OCSTAMPQ9BR26 566 aa5.22□□□□□ -1.57
RNU6-541P-201ENST00000384709 SNRKQ9NRH2 765 aa5.22□□□□□ -1.57
RNU6-541P-201ENST00000384709 DGAT1O75907 488 aa5.21□□□□□ -1.58
RNU6-541P-201ENST00000384709 LINC01559Q495D7 138 aa5.21□□□□□ -1.58
RNU6-541P-201ENST00000384709 BPHLQ86WA6 291 aaPredicted RBP5.21□□□□□ -1.58
RNU6-541P-201ENST00000384709 PNMA1Q8ND90 353 aa5.21□□□□□ -1.58
RNU6-541P-201ENST00000384709 FOXJ1Q92949 421 aa5.21□□□□□ -1.58
RNU6-541P-201ENST00000384709 ATP1B4Q9UN42 357 aaPredicted RBP5.21□□□□□ -1.58
RNU6-541P-201ENST00000384709 MAP4K5Q9Y4K4 846 aa5.21□□□□□ -1.58
RNU6-541P-201ENST00000384709 APBB1O00213 710 aa5.2□□□□□ -1.58
RNU6-541P-201ENST00000384709 SMCPP49901 116 aaPredicted RBP5.2□□□□□ -1.58
RNU6-541P-201ENST00000384709 NFX1Q12986 1120 aaKnown RBP5.2□□□□□ -1.58
RNU6-541P-201ENST00000384709 MCM6Q14566 821 aa5.2□□□□□ -1.58
RNU6-541P-201ENST00000384709 CRIPAKQ8N1N5 446 aa5.2□□□□□ -1.58
RNU6-541P-201ENST00000384709 TNFRSF10AO00220 468 aa5.19□□□□□ -1.58
RNU6-541P-201ENST00000384709 SMPD1P17405 629 aa5.19□□□□□ -1.58
RNU6-541P-201ENST00000384709 FOXC1Q12948 553 aa5.19□□□□□ -1.58
RNU6-541P-201ENST00000384709 CYP4X1Q8N118 509 aa5.19□□□□□ -1.58
RNU6-541P-201ENST00000384709 EHBP1Q8NDI1 1231 aa5.19□□□□□ -1.58
RNU6-541P-201ENST00000384709 FAM174AQ8TBP5 190 aa5.19□□□□□ -1.58
RNU6-541P-201ENST00000384709 PSMG3-AS1Q96PY0 264 aa5.19□□□□□ -1.58
RNU6-541P-201ENST00000384709 PTK2Q05397 1052 aa5.18□□□□□ -1.58
RNU6-541P-201ENST00000384709 FLIIQ13045 1269 aa5.18□□□□□ -1.58
RNU6-541P-201ENST00000384709 ERFEQ4G0M1 354 aa5.18□□□□□ -1.58
RNU6-541P-201ENST00000384709 NDUFB9Q9Y6M9 179 aa5.18□□□□□ -1.58
RNU6-541P-201ENST00000384709 CDV3Q9UKY7 258 aaKnown RBP5.17□□□□□ -1.58
RNU6-541P-201ENST00000384709 FAM181BA6NEQ2 426 aa5.16□□□□□ -1.58
RNU6-541P-201ENST00000384709 ZBBXA8MT70 800 aa5.16□□□□□ -1.58
RNU6-541P-201ENST00000384709 J3QL48 77 aa5.16□□□□□ -1.58
RNU6-541P-201ENST00000384709 GRM5P41594 1212 aa5.16□□□□□ -1.58
RNU6-541P-201ENST00000384709 MCCD1P59942 119 aaPredicted RBP5.16□□□□□ -1.58
RNU6-541P-201ENST00000384709 CTC1Q2NKJ3 1217 aa5.16□□□□□ -1.58
RNU6-541P-201ENST00000384709 ARHGAP9Q9BRR9 750 aa5.16□□□□□ -1.58
RNU6-541P-201ENST00000384709 KLF16Q9BXK1 252 aaPredicted RBP5.16□□□□□ -1.58
RNU6-541P-201ENST00000384709 TTC24A2A3L6 582 aaPredicted RBP5.15□□□□□ -1.59
RNU6-541P-201ENST00000384709 ESPNB1AK53 854 aa5.15□□□□□ -1.59
RNU6-541P-201ENST00000384709 ADH1CP00326 375 aa5.15□□□□□ -1.59
RNU6-541P-201ENST00000384709 NR1H3Q13133 447 aa5.15□□□□□ -1.59
RNU6-541P-201ENST00000384709 NR5A1Q13285 461 aa5.15□□□□□ -1.59
RNU6-541P-201ENST00000384709 IRF5Q13568 498 aa5.15□□□□□ -1.59
RNU6-541P-201ENST00000384709 LCE2CQ5TA81 110 aa5.15□□□□□ -1.59
RNU6-541P-201ENST00000384709 FAM187AA6NFU0 413 aa5.14□□□□□ -1.59
RNU6-541P-201ENST00000384709 FBXO45P0C2W1 286 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms