RNA–Protein interactions for RNA: ENST00000382020.8

TUSC3-201, Transcript of tumor suppressor candidate 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUSC3, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-201ENST00000382020 SYCP2Q9BX26 1530 aa18.25■□□□□ 0.51
TUSC3-201ENST00000382020 K7ELQ4 463 aaPredicted RBP18.25■□□□□ 0.51
TUSC3-201ENST00000382020 VGFO15240 615 aaPredicted RBP18.25■□□□□ 0.51
TUSC3-201ENST00000382020 KRT24Q2M2I5 525 aa18.25■□□□□ 0.51
TUSC3-201ENST00000382020 SKOR2Q2VWA4 1001 aaPredicted RBP18.25■□□□□ 0.51
TUSC3-201ENST00000382020 TSPYL6Q8N831 410 aa18.25■□□□□ 0.51
TUSC3-201ENST00000382020 NUTM2GQ5VZR2 741 aa18.24■□□□□ 0.51
TUSC3-201ENST00000382020 GAS2L3Q86XJ1 694 aa18.24■□□□□ 0.51
TUSC3-201ENST00000382020 RTF1Q92541 710 aaKnown RBP18.24■□□□□ 0.51
TUSC3-201ENST00000382020 BLMP54132 1417 aaPredicted RBP18.24■□□□□ 0.51
TUSC3-201ENST00000382020 TBC1D9Q6ZT07 1266 aa18.24■□□□□ 0.51
TUSC3-201ENST00000382020 WAPLQ7Z5K2 1190 aa18.24■□□□□ 0.51
TUSC3-201ENST00000382020 EMILIN1Q9Y6C2 1016 aa18.24■□□□□ 0.51
TUSC3-201ENST00000382020 ZMYM4Q5VZL5 1548 aa18.24■□□□□ 0.51
TUSC3-201ENST00000382020 CDC45O75419 566 aa18.23■□□□□ 0.51
TUSC3-201ENST00000382020 CCDC173Q0VFZ6 552 aa18.23■□□□□ 0.51
TUSC3-201ENST00000382020 CCDC27Q2M243 656 aa18.23■□□□□ 0.51
TUSC3-201ENST00000382020 KIAA0556O60303 1618 aa18.23■□□□□ 0.51
TUSC3-201ENST00000382020 DDX54Q8TDD1 881 aaKnown RBP18.22■□□□□ 0.51
TUSC3-201ENST00000382020 CHMP4BQ9H444 224 aaKnown RBP18.22■□□□□ 0.51
TUSC3-201ENST00000382020 NGEFQ8N5V2 710 aa18.22■□□□□ 0.51
TUSC3-201ENST00000382020 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.22■□□□□ 0.51
TUSC3-201ENST00000382020 GAS2L2Q8NHY3 880 aa18.22■□□□□ 0.51
TUSC3-201ENST00000382020 UPF3BQ9BZI7 483 aaKnown RBP18.22■□□□□ 0.51
TUSC3-201ENST00000382020 CDK11BP21127 795 aaKnown RBP18.21■□□□□ 0.51
TUSC3-201ENST00000382020 SCAF11Q99590 1463 aaKnown RBP18.21■□□□□ 0.51
TUSC3-201ENST00000382020 SYCE3A1L190 88 aa18.21■□□□□ 0.51
TUSC3-201ENST00000382020 EXOC6BQ9Y2D4 811 aa18.21■□□□□ 0.51
TUSC3-201ENST00000382020 ZNF521Q96K83 1311 aa18.2■□□□□ 0.5
TUSC3-201ENST00000382020 ZRANB1Q9UGI0 708 aa18.2■□□□□ 0.5
TUSC3-201ENST00000382020 ASXL1Q8IXJ9 1541 aa18.2■□□□□ 0.5
TUSC3-201ENST00000382020 CFAP65Q6ZU64 1925 aaKnown RBP18.2■□□□□ 0.5
TUSC3-201ENST00000382020 F6X3S4 739 aa18.2■□□□□ 0.5
TUSC3-201ENST00000382020 DRC7Q8IY82 874 aa18.2■□□□□ 0.5
TUSC3-201ENST00000382020 NOS1P29475 1434 aa18.19■□□□□ 0.5
TUSC3-201ENST00000382020 EIF2S2P20042 333 aaKnown RBP18.19■□□□□ 0.5
TUSC3-201ENST00000382020 MCM10Q7L590 875 aa18.19■□□□□ 0.5
TUSC3-201ENST00000382020 CBX1P83916 185 aa18.19■□□□□ 0.5
TUSC3-201ENST00000382020 CD2BP2O95400 341 aaKnown RBP18.19■□□□□ 0.5
TUSC3-201ENST00000382020 ANTXR1Q9H6X2 564 aa18.19■□□□□ 0.5
TUSC3-201ENST00000382020 OTUD7AQ8TE49 926 aaPredicted RBP18.18■□□□□ 0.5
TUSC3-201ENST00000382020 CDK19Q9BWU1 502 aa18.18■□□□□ 0.5
TUSC3-201ENST00000382020 MBD5Q9P267 1494 aa18.18■□□□□ 0.5
TUSC3-201ENST00000382020 FAM177BA6PVY3 158 aa18.18■□□□□ 0.5
TUSC3-201ENST00000382020 TRAPPC8Q9Y2L5 1435 aa18.18■□□□□ 0.5
TUSC3-201ENST00000382020 IGSF3O75054 1194 aa18.17■□□□□ 0.5
TUSC3-201ENST00000382020 KIAA2012Q0VF49 1180 aa18.17■□□□□ 0.5
TUSC3-201ENST00000382020 FSD2A1L4K1 749 aa18.17■□□□□ 0.5
TUSC3-201ENST00000382020 MCCP23508 829 aa18.17■□□□□ 0.5
TUSC3-201ENST00000382020 FKBP5Q13451 457 aaPredicted RBP18.17■□□□□ 0.5
TUSC3-201ENST00000382020 SULT6B1Q6IMI4 303 aa18.17■□□□□ 0.5
TUSC3-201ENST00000382020 COG3Q96JB2 828 aa18.17■□□□□ 0.5
TUSC3-201ENST00000382020 PHACTR3Q96KR7 559 aa18.16■□□□□ 0.5
TUSC3-201ENST00000382020 ZGPATQ8N5A5 531 aaKnown RBP18.16■□□□□ 0.5
TUSC3-201ENST00000382020 IL1RAPL2Q9NP60 686 aa18.16■□□□□ 0.5
TUSC3-201ENST00000382020 TXNDC2Q86VQ3 553 aa18.16■□□□□ 0.5
TUSC3-201ENST00000382020 STK31Q9BXU1 1019 aa18.16■□□□□ 0.5
TUSC3-201ENST00000382020 GNAI1P63096 354 aa18.15■□□□□ 0.5
TUSC3-201ENST00000382020 SLC4A2P04920 1241 aa18.15■□□□□ 0.5
TUSC3-201ENST00000382020 FOSBP53539 338 aa18.15■□□□□ 0.5
TUSC3-201ENST00000382020 INTS3Q68E01 1043 aaKnown RBP18.15■□□□□ 0.5
TUSC3-201ENST00000382020 NME9Q86XW9 330 aa18.15■□□□□ 0.5
TUSC3-201ENST00000382020 TSC1Q92574 1164 aa18.14■□□□□ 0.49
TUSC3-201ENST00000382020 ARHGEF12Q9NZN5 1544 aa18.14■□□□□ 0.49
TUSC3-201ENST00000382020 FBXW7Q969H0 707 aa18.14■□□□□ 0.49
TUSC3-201ENST00000382020 NCKAP5LQ9HCH0 1330 aa18.13■□□□□ 0.49
TUSC3-201ENST00000382020 GOLGA6L4A6NEF3 574 aa18.13■□□□□ 0.49
TUSC3-201ENST00000382020 BAG4O95429 457 aaKnown RBP18.13■□□□□ 0.49
TUSC3-201ENST00000382020 PKP1Q13835 747 aa18.13■□□□□ 0.49
TUSC3-201ENST00000382020 API5Q9BZZ5 524 aaKnown RBP18.13■□□□□ 0.49
TUSC3-201ENST00000382020 FGD1P98174 961 aa18.13■□□□□ 0.49
TUSC3-201ENST00000382020 PLA2R1Q13018 1463 aa18.13■□□□□ 0.49
TUSC3-201ENST00000382020 FIBPO43427 364 aa18.12■□□□□ 0.49
TUSC3-201ENST00000382020 ZNF830Q96NB3 372 aaPredicted RBP18.12■□□□□ 0.49
TUSC3-201ENST00000382020 PTMSP20962 102 aa18.12■□□□□ 0.49
TUSC3-201ENST00000382020 HMMRO75330 724 aa18.12■□□□□ 0.49
TUSC3-201ENST00000382020 FBXO31Q5XUX0 539 aaPredicted RBP18.11■□□□□ 0.49
TUSC3-201ENST00000382020 C8orf58Q8NAV2 365 aa18.11■□□□□ 0.49
TUSC3-201ENST00000382020 MAP7D2Q96T17 732 aa18.11■□□□□ 0.49
TUSC3-201ENST00000382020 VPS37CA5D8V6 355 aaPredicted RBP18.11■□□□□ 0.49
TUSC3-201ENST00000382020 FYB1O15117 783 aa18.11■□□□□ 0.49
TUSC3-201ENST00000382020 NUCB2P80303 420 aa18.11■□□□□ 0.49
TUSC3-201ENST00000382020 TRMT2AQ8IZ69 625 aaKnown RBP18.11■□□□□ 0.49
TUSC3-201ENST00000382020 REC8O95072 547 aa18.11■□□□□ 0.49
TUSC3-201ENST00000382020 SPC24Q8NBT2 197 aa18.1■□□□□ 0.49
TUSC3-201ENST00000382020 TSPYL4Q9UJ04 414 aa18.1■□□□□ 0.49
TUSC3-201ENST00000382020 AMPHP49418 695 aa18.1■□□□□ 0.49
TUSC3-201ENST00000382020 NUCB1Q02818 461 aa18.1■□□□□ 0.49
TUSC3-201ENST00000382020 ZBTB40Q9NUA8 1239 aa18.1■□□□□ 0.49
TUSC3-201ENST00000382020 IDI1Q13907 227 aa18.1■□□□□ 0.49
TUSC3-201ENST00000382020 ZNF771Q7L3S4 317 aaPredicted RBP18.1■□□□□ 0.49
TUSC3-201ENST00000382020 GCC1Q96CN9 775 aa18.1■□□□□ 0.49
TUSC3-201ENST00000382020 SPDYE4A6NLX3 237 aa18.09■□□□□ 0.49
TUSC3-201ENST00000382020 ADGRL2O95490 1459 aa18.09■□□□□ 0.49
TUSC3-201ENST00000382020 MBIPQ9NS73 344 aa18.09■□□□□ 0.49
TUSC3-201ENST00000382020 NINLQ9Y2I6 1382 aa18.09■□□□□ 0.49
TUSC3-201ENST00000382020 TRIM35Q9UPQ4 493 aa18.09■□□□□ 0.49
TUSC3-201ENST00000382020 WDR7Q9Y4E6 1490 aa18.08■□□□□ 0.49
TUSC3-201ENST00000382020 OFD1O75665 1012 aa18.08■□□□□ 0.49
TUSC3-201ENST00000382020 CHAF1AQ13111 956 aaPredicted RBP18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms