RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 ARHGEF28Q8N1W1 1705 aaKnown RBP18.73■□□□□ 0.59
RPAIN-202ENST00000381208 RALGAPBQ86X10 1494 aa18.72■□□□□ 0.59
RPAIN-202ENST00000381208 CDK19Q9BWU1 502 aa18.72■□□□□ 0.59
RPAIN-202ENST00000381208 CCDC61Q9Y6R9 512 aa18.72■□□□□ 0.59
RPAIN-202ENST00000381208 ATP7BP35670 1465 aa18.72■□□□□ 0.59
RPAIN-202ENST00000381208 PAK3O75914 559 aaPredicted RBP18.7■□□□□ 0.58
RPAIN-202ENST00000381208 NWD2Q9ULI1 1742 aa18.7■□□□□ 0.58
RPAIN-202ENST00000381208 FAM83GA6ND36 823 aa18.69■□□□□ 0.58
RPAIN-202ENST00000381208 ITSN1Q15811 1721 aa18.69■□□□□ 0.58
RPAIN-202ENST00000381208 TRPM3Q9HCF6 1732 aaPredicted RBP18.69■□□□□ 0.58
RPAIN-202ENST00000381208 ONECUT3O60422 494 aaPredicted RBP18.68■□□□□ 0.58
RPAIN-202ENST00000381208 PLEKHG5O94827 1062 aa18.68■□□□□ 0.58
RPAIN-202ENST00000381208 NBPF1Q3BBV0 1214 aa18.68■□□□□ 0.58
RPAIN-202ENST00000381208 CCDC9Q9Y3X0 531 aaKnown RBP18.68■□□□□ 0.58
RPAIN-202ENST00000381208 CENPJQ9HC77 1338 aaPredicted RBP18.68■□□□□ 0.58
RPAIN-202ENST00000381208 POLR3AO14802 1390 aaPredicted RBP18.68■□□□□ 0.58
RPAIN-202ENST00000381208 PLEKHG3A1L390 1219 aa18.68■□□□□ 0.58
RPAIN-202ENST00000381208 ALS2Q96Q42 1657 aa18.67■□□□□ 0.58
RPAIN-202ENST00000381208 GLI3P10071 1580 aa18.67■□□□□ 0.58
RPAIN-202ENST00000381208 L3MBTL2Q969R5 705 aa18.67■□□□□ 0.58
RPAIN-202ENST00000381208 ABCA3Q99758 1704 aa18.66■□□□□ 0.58
RPAIN-202ENST00000381208 SEPT12Q8IYM1 358 aa18.66■□□□□ 0.58
RPAIN-202ENST00000381208 SPINK5Q9NQ38 1064 aaPredicted RBP18.66■□□□□ 0.58
RPAIN-202ENST00000381208 NBPF8Q3BBV2 869 aa18.65■□□□□ 0.58
RPAIN-202ENST00000381208 BTG4Q9NY30 223 aa18.65■□□□□ 0.58
RPAIN-202ENST00000381208 BRD4O60885 1362 aaPredicted RBP18.64■□□□□ 0.57
RPAIN-202ENST00000381208 ACEP12821 1306 aa18.64■□□□□ 0.57
RPAIN-202ENST00000381208 SRPK2P78362 688 aaKnown RBP18.64■□□□□ 0.57
RPAIN-202ENST00000381208 PRDM11Q9NQV5 511 aa18.64■□□□□ 0.57
RPAIN-202ENST00000381208 PLCH1Q4KWH8 1693 aa18.63■□□□□ 0.57
RPAIN-202ENST00000381208 COL14A1Q05707 1796 aaKnown RBP18.62■□□□□ 0.57
RPAIN-202ENST00000381208 U3KPZ7 1027 aaPredicted RBP18.62■□□□□ 0.57
RPAIN-202ENST00000381208 KRT27Q7Z3Y8 459 aa18.61■□□□□ 0.57
RPAIN-202ENST00000381208 BLMP54132 1417 aaPredicted RBP18.61■□□□□ 0.57
RPAIN-202ENST00000381208 SF3B2Q13435 895 aaKnown RBP18.6■□□□□ 0.57
RPAIN-202ENST00000381208 EP400Q96L91 3159 aa18.6■□□□□ 0.57
RPAIN-202ENST00000381208 ABTB2Q8N961 1025 aa18.59■□□□□ 0.57
RPAIN-202ENST00000381208 SIN3AQ96ST3 1273 aa18.59■□□□□ 0.57
RPAIN-202ENST00000381208 ZRANB1Q9UGI0 708 aa18.59■□□□□ 0.57
RPAIN-202ENST00000381208 TOPAZ1Q8N9V7 1692 aa18.59■□□□□ 0.57
RPAIN-202ENST00000381208 EVC2Q86UK5 1308 aa18.59■□□□□ 0.57
RPAIN-202ENST00000381208 PPIP5K1Q6PFW1 1433 aa18.58■□□□□ 0.57
RPAIN-202ENST00000381208 A0A0G2JS52 829 aa18.58■□□□□ 0.57
RPAIN-202ENST00000381208 MYT1Q01538 1121 aa18.58■□□□□ 0.57
RPAIN-202ENST00000381208 NEUROD1Q13562 356 aa18.58■□□□□ 0.57
RPAIN-202ENST00000381208 SPATA31A5Q5VU36 1347 aa18.58■□□□□ 0.56
RPAIN-202ENST00000381208 SPATA31A7Q8IWB4 1347 aa18.58■□□□□ 0.56
RPAIN-202ENST00000381208 NLRP13Q86W25 1043 aa18.57■□□□□ 0.56
RPAIN-202ENST00000381208 ROCK2O75116 1388 aaKnown RBP18.57■□□□□ 0.56
RPAIN-202ENST00000381208 KIAA0232Q92628 1395 aa18.57■□□□□ 0.56
RPAIN-202ENST00000381208 FAM98CQ17RN3 349 aaKnown RBP18.56■□□□□ 0.56
RPAIN-202ENST00000381208 CABP2Q9NPB3 220 aa18.56■□□□□ 0.56
RPAIN-202ENST00000381208 NRAPQ86VF7 1730 aa18.56■□□□□ 0.56
RPAIN-202ENST00000381208 CRYBG1Q9Y4K1 1723 aa18.55■□□□□ 0.56
RPAIN-202ENST00000381208 USP19O94966 1318 aa18.54■□□□□ 0.56
RPAIN-202ENST00000381208 CPDO75976 1380 aa18.54■□□□□ 0.56
RPAIN-202ENST00000381208 ZC3H6P61129 1189 aaKnown RBP18.54■□□□□ 0.56
RPAIN-202ENST00000381208 NUTM2GQ5VZR2 741 aa18.54■□□□□ 0.56
RPAIN-202ENST00000381208 CABP1Q9NZU7 370 aa18.54■□□□□ 0.56
RPAIN-202ENST00000381208 TRPM1Q7Z4N2 1603 aa18.52■□□□□ 0.56
RPAIN-202ENST00000381208 QRICH2Q9H0J4 1663 aa18.52■□□□□ 0.56
RPAIN-202ENST00000381208 EVA1CP58658 441 aa18.52■□□□□ 0.55
RPAIN-202ENST00000381208 CHRNA2Q15822 529 aa18.52■□□□□ 0.55
RPAIN-202ENST00000381208 ZNF692Q9BU19 519 aaPredicted RBP18.52■□□□□ 0.55
RPAIN-202ENST00000381208 SPATA31A1Q5TZJ5 1347 aa18.51■□□□□ 0.55
RPAIN-202ENST00000381208 BRWD3Q6RI45 1802 aa18.51■□□□□ 0.55
RPAIN-202ENST00000381208 USP6P35125 1406 aa18.51■□□□□ 0.55
RPAIN-202ENST00000381208 PHRF1Q9P1Y6 1649 aaKnown RBP18.51■□□□□ 0.55
RPAIN-202ENST00000381208 GCP02774 474 aa18.51■□□□□ 0.55
RPAIN-202ENST00000381208 STRN4Q9NRL3 753 aa18.5■□□□□ 0.55
RPAIN-202ENST00000381208 BAG6P46379 1132 aa18.49■□□□□ 0.55
RPAIN-202ENST00000381208 NLRP6P59044 892 aa18.48■□□□□ 0.55
RPAIN-202ENST00000381208 BARGINQ6ZT62 677 aa18.48■□□□□ 0.55
RPAIN-202ENST00000381208 SBNO2Q9Y2G9 1366 aa18.48■□□□□ 0.55
RPAIN-202ENST00000381208 NRKQ7Z2Y5 1582 aa18.47■□□□□ 0.55
RPAIN-202ENST00000381208 THRAP3Q9Y2W1 955 aaKnown RBP18.47■□□□□ 0.55
RPAIN-202ENST00000381208 TONSLQ96HA7 1378 aa18.47■□□□□ 0.55
RPAIN-202ENST00000381208 SSH2Q76I76 1423 aa18.47■□□□□ 0.55
RPAIN-202ENST00000381208 DEFB132Q7Z7B7 95 aa18.46■□□□□ 0.55
RPAIN-202ENST00000381208 TCP11L2Q8N4U5 519 aa18.45■□□□□ 0.54
RPAIN-202ENST00000381208 CARD11Q9BXL7 1154 aa18.45■□□□□ 0.54
RPAIN-202ENST00000381208 THSD7AQ9UPZ6 1657 aa18.45■□□□□ 0.54
RPAIN-202ENST00000381208 FAM196AQ6ZSG2 479 aa18.44■□□□□ 0.54
RPAIN-202ENST00000381208 TTC21AQ8NDW8 1320 aa18.44■□□□□ 0.54
RPAIN-202ENST00000381208 AATKQ6ZMQ8 1374 aa18.43■□□□□ 0.54
RPAIN-202ENST00000381208 C11orf95C9JLR9 678 aaPredicted RBP18.43■□□□□ 0.54
RPAIN-202ENST00000381208 KCNH5Q8NCM2 988 aa18.43■□□□□ 0.54
RPAIN-202ENST00000381208 CAMTA1Q9Y6Y1 1673 aa18.43■□□□□ 0.54
RPAIN-202ENST00000381208 SLC24A1O60721 1099 aa18.42■□□□□ 0.54
RPAIN-202ENST00000381208 PDE3BQ13370 1112 aa18.42■□□□□ 0.54
RPAIN-202ENST00000381208 TTC21BQ7Z4L5 1316 aa18.42■□□□□ 0.54
RPAIN-202ENST00000381208 TRIM26Q12899 539 aaPredicted RBP18.42■□□□□ 0.54
RPAIN-202ENST00000381208 LARP1Q6PKG0 1096 aaKnown RBP18.42■□□□□ 0.54
RPAIN-202ENST00000381208 USP35Q9P2H5 1018 aa18.42■□□□□ 0.54
RPAIN-202ENST00000381208 SLIT3O75094 1523 aa18.41■□□□□ 0.54
RPAIN-202ENST00000381208 LMO7Q8WWI1 1683 aa18.41■□□□□ 0.54
RPAIN-202ENST00000381208 DISP2A7MBM2 1401 aa18.4■□□□□ 0.54
RPAIN-202ENST00000381208 CPSF1Q10570 1443 aaKnown RBP18.4■□□□□ 0.54
RPAIN-202ENST00000381208 PUS7Q96PZ0 661 aaKnown RBP18.4■□□□□ 0.54
RPAIN-202ENST00000381208 SRCAPQ6ZRS2 3230 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms