RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 CRYBG1Q9Y4K1 1723 aa25.94■■□□□ 1.74
HMGN1-203ENST00000380748 CAMKK2Q96RR4 588 aa25.93■■□□□ 1.74
HMGN1-203ENST00000380748 MPHOSPH9Q99550 1183 aa25.93■■□□□ 1.74
HMGN1-203ENST00000380748 TRIM37O94972 964 aa25.92■■□□□ 1.74
HMGN1-203ENST00000380748 POGKQ9P215 609 aa25.92■■□□□ 1.74
HMGN1-203ENST00000380748 DLC1Q96QB1 1528 aa25.92■■□□□ 1.74
HMGN1-203ENST00000380748 GPRASP1Q5JY77 1395 aa25.92■■□□□ 1.74
HMGN1-203ENST00000380748 ACIN1Q9UKV3 1341 aaKnown RBP25.9■■□□□ 1.74
HMGN1-203ENST00000380748 PRR36Q9H6K5 1346 aa25.89■■□□□ 1.74
HMGN1-203ENST00000380748 HIRIP3Q9BW71 556 aaPredicted RBP25.89■■□□□ 1.74
HMGN1-203ENST00000380748 PRDM11Q9NQV5 511 aa25.89■■□□□ 1.74
HMGN1-203ENST00000380748 SPATA31A1Q5TZJ5 1347 aa25.88■■□□□ 1.73
HMGN1-203ENST00000380748 YY1P25490 414 aa25.87■■□□□ 1.73
HMGN1-203ENST00000380748 APBA3O96018 575 aa25.86■■□□□ 1.73
HMGN1-203ENST00000380748 FAM196AQ6ZSG2 479 aa25.86■■□□□ 1.73
HMGN1-203ENST00000380748 TULP4Q9NRJ4 1543 aa25.85■■□□□ 1.73
HMGN1-203ENST00000380748 RREB1Q92766 1687 aa25.85■■□□□ 1.73
HMGN1-203ENST00000380748 PARD3Q8TEW0 1356 aa25.84■■□□□ 1.73
HMGN1-203ENST00000380748 PAK3O75914 559 aaPredicted RBP25.84■■□□□ 1.73
HMGN1-203ENST00000380748 MINK1Q8N4C8 1332 aaPredicted RBP25.84■■□□□ 1.73
HMGN1-203ENST00000380748 KIAA0232Q92628 1395 aa25.83■■□□□ 1.73
HMGN1-203ENST00000380748 NUP188Q5SRE5 1749 aa25.83■■□□□ 1.73
HMGN1-203ENST00000380748 ADGRB1O14514 1584 aa25.83■■□□□ 1.73
HMGN1-203ENST00000380748 CHRNA2Q15822 529 aa25.83■■□□□ 1.73
HMGN1-203ENST00000380748 STRN4Q9NRL3 753 aa25.82■■□□□ 1.72
HMGN1-203ENST00000380748 EIF3AQ14152 1382 aaKnown RBP25.82■■□□□ 1.72
HMGN1-203ENST00000380748 NGDNQ8NEJ9 315 aaKnown RBP25.81■■□□□ 1.72
HMGN1-203ENST00000380748 TRAK1Q9UPV9 953 aa25.81■■□□□ 1.72
HMGN1-203ENST00000380748 PHRF1Q9P1Y6 1649 aaKnown RBP25.79■■□□□ 1.72
HMGN1-203ENST00000380748 USP35Q9P2H5 1018 aa25.78■■□□□ 1.72
HMGN1-203ENST00000380748 WASLO00401 505 aaPredicted RBP25.77■■□□□ 1.72
HMGN1-203ENST00000380748 ZC3H6P61129 1189 aaKnown RBP25.75■■□□□ 1.71
HMGN1-203ENST00000380748 SSH2Q76I76 1423 aa25.73■■□□□ 1.71
HMGN1-203ENST00000380748 PDE3BQ13370 1112 aa25.73■■□□□ 1.71
HMGN1-203ENST00000380748 NBPF8Q3BBV2 869 aa25.73■■□□□ 1.71
HMGN1-203ENST00000380748 NBPF14Q5TI25 921 aa25.73■■□□□ 1.71
HMGN1-203ENST00000380748 NUTM2GQ5VZR2 741 aa25.72■■□□□ 1.71
HMGN1-203ENST00000380748 BARGINQ6ZT62 677 aa25.72■■□□□ 1.71
HMGN1-203ENST00000380748 PPP1R1BQ9UD71 204 aaPredicted RBP25.71■■□□□ 1.71
HMGN1-203ENST00000380748 ATP7BP35670 1465 aa25.71■■□□□ 1.71
HMGN1-203ENST00000380748 ITSN1Q15811 1721 aa25.71■■□□□ 1.71
HMGN1-203ENST00000380748 SPON1Q9HCB6 807 aa25.7■■□□□ 1.7
HMGN1-203ENST00000380748 EVA1CP58658 441 aa25.69■■□□□ 1.7
HMGN1-203ENST00000380748 CAMTA1Q9Y6Y1 1673 aa25.68■■□□□ 1.7
HMGN1-203ENST00000380748 LARP1Q6PKG0 1096 aaKnown RBP25.68■■□□□ 1.7
HMGN1-203ENST00000380748 NINLQ9Y2I6 1382 aa25.68■■□□□ 1.7
HMGN1-203ENST00000380748 KCNQ2O43526 872 aa25.67■■□□□ 1.7
HMGN1-203ENST00000380748 NRKQ7Z2Y5 1582 aa25.66■■□□□ 1.7
HMGN1-203ENST00000380748 NUDT16Q96DE0 195 aaKnown RBP25.66■■□□□ 1.7
HMGN1-203ENST00000380748 TCP11L2Q8N4U5 519 aa25.65■■□□□ 1.7
HMGN1-203ENST00000380748 LMO7Q8WWI1 1683 aa25.64■■□□□ 1.7
HMGN1-203ENST00000380748 ARHGEF28Q8N1W1 1705 aaKnown RBP25.63■■□□□ 1.69
HMGN1-203ENST00000380748 DCAF8L1A6NGE4 600 aa25.62■■□□□ 1.69
HMGN1-203ENST00000380748 KDM2AQ9Y2K7 1162 aa25.62■■□□□ 1.69
HMGN1-203ENST00000380748 PARP4Q9UKK3 1724 aaKnown RBP25.6■■□□□ 1.69
HMGN1-203ENST00000380748 POLR3AO14802 1390 aaPredicted RBP25.6■■□□□ 1.69
HMGN1-203ENST00000380748 TOPAZ1Q8N9V7 1692 aa25.6■■□□□ 1.69
HMGN1-203ENST00000380748 CPDO75976 1380 aa25.59■■□□□ 1.69
HMGN1-203ENST00000380748 ACEP12821 1306 aa25.59■■□□□ 1.69
HMGN1-203ENST00000380748 DCAF11Q8TEB1 546 aa25.58■■□□□ 1.69
HMGN1-203ENST00000380748 PEAK1Q9H792 1746 aa25.57■■□□□ 1.68
HMGN1-203ENST00000380748 ANO8Q9HCE9 1232 aaPredicted RBP25.57■■□□□ 1.68
HMGN1-203ENST00000380748 THRAP3Q9Y2W1 955 aaKnown RBP25.57■■□□□ 1.68
HMGN1-203ENST00000380748 ABTB2Q8N961 1025 aa25.56■■□□□ 1.68
HMGN1-203ENST00000380748 CDK19Q9BWU1 502 aa25.56■■□□□ 1.68
HMGN1-203ENST00000380748 USP19O94966 1318 aa25.56■■□□□ 1.68
HMGN1-203ENST00000380748 RGPD3A6NKT7 1758 aaPredicted RBP25.56■■□□□ 1.68
HMGN1-203ENST00000380748 RGPD4Q7Z3J3 1758 aa25.56■■□□□ 1.68
HMGN1-203ENST00000380748 CASZ1Q86V15 1759 aa25.56■■□□□ 1.68
HMGN1-203ENST00000380748 COL5A2P05997 1499 aaPredicted RBP25.55■■□□□ 1.68
HMGN1-203ENST00000380748 OVOS2A0A0G2JMS6 1433 aa25.54■■□□□ 1.68
HMGN1-203ENST00000380748 OVOS2A0A0J9YW53 1432 aa25.54■■□□□ 1.68
HMGN1-203ENST00000380748 OVOS2Q6IE36 1432 aa25.54■■□□□ 1.68
HMGN1-203ENST00000380748 UTRNP46939 3433 aa25.54■■□□□ 1.68
HMGN1-203ENST00000380748 PDGFDQ9GZP0 370 aaPredicted RBP25.53■■□□□ 1.68
HMGN1-203ENST00000380748 SBF2Q86WG5 1849 aa25.53■■□□□ 1.68
HMGN1-203ENST00000380748 LRRC37A3O60309 1634 aa25.52■■□□□ 1.68
HMGN1-203ENST00000380748 PLEKHG3A1L390 1219 aa25.51■■□□□ 1.67
HMGN1-203ENST00000380748 C11orf95C9JLR9 678 aaPredicted RBP25.51■■□□□ 1.67
HMGN1-203ENST00000380748 CCDC61Q9Y6R9 512 aa25.51■■□□□ 1.67
HMGN1-203ENST00000380748 PLSCR1O15162 318 aa25.5■■□□□ 1.67
HMGN1-203ENST00000380748 GCP02774 474 aa25.5■■□□□ 1.67
HMGN1-203ENST00000380748 MYOM1P52179 1685 aa25.5■■□□□ 1.67
HMGN1-203ENST00000380748 CRB1P82279 1406 aa25.5■■□□□ 1.67
HMGN1-203ENST00000380748 PTF1AQ7RTS3 328 aa25.5■■□□□ 1.67
HMGN1-203ENST00000380748 ZBTB7AO95365 584 aa25.48■■□□□ 1.67
HMGN1-203ENST00000380748 ZNF784Q8NCA9 323 aaPredicted RBP25.48■■□□□ 1.67
HMGN1-203ENST00000380748 NLRP13Q86W25 1043 aa25.46■■□□□ 1.67
HMGN1-203ENST00000380748 ZBTB7CA1YPR0 619 aa25.45■■□□□ 1.66
HMGN1-203ENST00000380748 BCL11BQ9C0K0 894 aaPredicted RBP25.45■■□□□ 1.66
HMGN1-203ENST00000380748 RAB3GAP2Q9H2M9 1393 aa25.44■■□□□ 1.66
HMGN1-203ENST00000380748 PTGER2P43116 358 aa25.44■■□□□ 1.66
HMGN1-203ENST00000380748 DDB1Q16531 1140 aa25.44■■□□□ 1.66
HMGN1-203ENST00000380748 PROM2Q8N271 834 aa25.44■■□□□ 1.66
HMGN1-203ENST00000380748 STAC3Q96MF2 364 aa25.44■■□□□ 1.66
HMGN1-203ENST00000380748 ATF5Q9Y2D1 282 aaPredicted RBP25.42■■□□□ 1.66
HMGN1-203ENST00000380748 PPIP5K1Q6PFW1 1433 aa25.41■■□□□ 1.66
HMGN1-203ENST00000380748 WNK3Q9BYP7 1800 aa25.41■■□□□ 1.66
HMGN1-203ENST00000380748 AATKQ6ZMQ8 1374 aa25.4■■□□□ 1.66
HMGN1-203ENST00000380748 TOM1L2Q6ZVM7 507 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms