RNA–Protein interactions for RNA: ENST00000378823.7

RAD50-201, Transcript of RAD50 double strand break repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD50, Length 8,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-201ENST00000378823 CNTLNQ9NXG0 1405 aa13.36□□□□□ -0.27
RAD50-201ENST00000378823 NEK4P51957 841 aa13.36□□□□□ -0.27
RAD50-201ENST00000378823 FSD1Q9BTV5 496 aa13.36□□□□□ -0.27
RAD50-201ENST00000378823 SPC24Q8NBT2 197 aa13.36□□□□□ -0.27
RAD50-201ENST00000378823 CCDC192P0DO97 292 aa13.35□□□□□ -0.27
RAD50-201ENST00000378823 RAPGEF4Q8WZA2 1011 aa13.35□□□□□ -0.27
RAD50-201ENST00000378823 RABEP1Q15276 862 aa13.35□□□□□ -0.27
RAD50-201ENST00000378823 WWC2Q6AWC2 1192 aa13.35□□□□□ -0.27
RAD50-201ENST00000378823 KIAA0754O94854 1291 aa13.35□□□□□ -0.27
RAD50-201ENST00000378823 BRD4O60885 1362 aaPredicted RBP13.35□□□□□ -0.27
RAD50-201ENST00000378823 GOLGA6L7A0A1B0GV03 622 aa13.35□□□□□ -0.27
RAD50-201ENST00000378823 TXLNBQ8N3L3 684 aa13.35□□□□□ -0.27
RAD50-201ENST00000378823 JPH4Q96JJ6 628 aa13.35□□□□□ -0.27
RAD50-201ENST00000378823 CFAP65Q6ZU64 1925 aaKnown RBP13.34□□□□□ -0.27
RAD50-201ENST00000378823 PRPF40AO75400 957 aaKnown RBP13.34□□□□□ -0.27
RAD50-201ENST00000378823 STIM1Q13586 685 aa13.34□□□□□ -0.27
RAD50-201ENST00000378823 CCDC30Q5VVM6 783 aa13.34□□□□□ -0.27
RAD50-201ENST00000378823 CCDC7Q96M83 1385 aa13.34□□□□□ -0.27
RAD50-201ENST00000378823 ANKRD1Q15327 319 aa13.34□□□□□ -0.27
RAD50-201ENST00000378823 SERPINC1P01008 464 aa13.33□□□□□ -0.27
RAD50-201ENST00000378823 MYOM3Q5VTT5 1437 aa13.33□□□□□ -0.28
RAD50-201ENST00000378823 GNAI3P08754 354 aa13.33□□□□□ -0.28
RAD50-201ENST00000378823 FIBPO43427 364 aa13.33□□□□□ -0.28
RAD50-201ENST00000378823 SUPT6HQ7KZ85 1726 aaKnown RBP13.32□□□□□ -0.28
RAD50-201ENST00000378823 RRBP1Q9P2E9 1410 aaKnown RBP13.32□□□□□ -0.28
RAD50-201ENST00000378823 ERC1Q8IUD2 1116 aa13.32□□□□□ -0.28
RAD50-201ENST00000378823 ANKRD18AQ8IVF6 992 aa13.32□□□□□ -0.28
RAD50-201ENST00000378823 EIF3JO75822 258 aaKnown RBP13.32□□□□□ -0.28
RAD50-201ENST00000378823 PPFIBP1Q86W92 1011 aa13.32□□□□□ -0.28
RAD50-201ENST00000378823 TMEM132AQ24JP5 1023 aa13.32□□□□□ -0.28
RAD50-201ENST00000378823 MTMR7Q9Y216 660 aa13.32□□□□□ -0.28
RAD50-201ENST00000378823 DACH1Q9UI36 760 aa13.32□□□□□ -0.28
RAD50-201ENST00000378823 ENOX2Q16206 610 aaKnown RBP13.31□□□□□ -0.28
RAD50-201ENST00000378823 CEBPZQ03701 1054 aaKnown RBP13.31□□□□□ -0.28
RAD50-201ENST00000378823 DEF6Q9H4E7 631 aa13.31□□□□□ -0.28
RAD50-201ENST00000378823 SURF6O75683 361 aaKnown RBP13.31□□□□□ -0.28
RAD50-201ENST00000378823 IQCEQ6IPM2 695 aa13.31□□□□□ -0.28
RAD50-201ENST00000378823 PLCD4Q9BRC7 762 aa13.31□□□□□ -0.28
RAD50-201ENST00000378823 TNMDQ9H2S6 317 aa13.31□□□□□ -0.28
RAD50-201ENST00000378823 CCDC181Q5TID7 509 aa13.31□□□□□ -0.28
RAD50-201ENST00000378823 STAC3Q96MF2 364 aa13.31□□□□□ -0.28
RAD50-201ENST00000378823 HSP90AB3PQ58FF7 597 aa13.31□□□□□ -0.28
RAD50-201ENST00000378823 KRT18P05783 430 aaKnown RBP13.3□□□□□ -0.28
RAD50-201ENST00000378823 STK38Q15208 465 aa13.3□□□□□ -0.28
RAD50-201ENST00000378823 KIF6Q6ZMV9 814 aa13.3□□□□□ -0.28
RAD50-201ENST00000378823 PAF1Q8N7H5 531 aa13.3□□□□□ -0.28
RAD50-201ENST00000378823 GNAI2P04899 355 aa13.3□□□□□ -0.28
RAD50-201ENST00000378823 MEX3CQ5U5Q3 659 aaKnown RBP13.3□□□□□ -0.28
RAD50-201ENST00000378823 WASHC2AQ641Q2 1341 aa13.3□□□□□ -0.28
RAD50-201ENST00000378823 ATP2B1P20020 1258 aa13.3□□□□□ -0.28
RAD50-201ENST00000378823 AEBP1Q8IUX7 1158 aa13.3□□□□□ -0.28
RAD50-201ENST00000378823 SMG6Q86US8 1419 aaKnown RBP13.29□□□□□ -0.28
RAD50-201ENST00000378823 ME1P48163 572 aa13.29□□□□□ -0.28
RAD50-201ENST00000378823 GCC1Q96CN9 775 aa13.29□□□□□ -0.28
RAD50-201ENST00000378823 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.29□□□□□ -0.281e-6■■■□□ 14.8
RAD50-201ENST00000378823 KDM4AO75164 1064 aa13.29□□□□□ -0.28
RAD50-201ENST00000378823 WDR33Q9C0J8 1336 aaKnown RBP13.29□□□□□ -0.28
RAD50-201ENST00000378823 ERLIN1O75477 346 aa13.28□□□□□ -0.28
RAD50-201ENST00000378823 TRIM22Q8IYM9 498 aa13.28□□□□□ -0.28
RAD50-201ENST00000378823 DNAJC2Q99543 621 aaKnown RBP13.28□□□□□ -0.28
RAD50-201ENST00000378823 CENPHQ9H3R5 247 aa13.28□□□□□ -0.28
RAD50-201ENST00000378823 CCDC112Q8NEF3 446 aa13.28□□□□□ -0.28
RAD50-201ENST00000378823 CYP46A1Q9Y6A2 500 aa13.28□□□□□ -0.28
RAD50-201ENST00000378823 ATF3P18847 181 aa13.28□□□□□ -0.28
RAD50-201ENST00000378823 KRT85P78386 507 aa13.28□□□□□ -0.28
RAD50-201ENST00000378823 GBP2P32456 591 aaPredicted RBP13.27□□□□□ -0.28
RAD50-201ENST00000378823 KIF21BO75037 1637 aa13.27□□□□□ -0.28
RAD50-201ENST00000378823 RBM10P98175 930 aaKnown RBP13.27□□□□□ -0.29
RAD50-201ENST00000378823 CFAP45Q9UL16 551 aa13.27□□□□□ -0.29
RAD50-201ENST00000378823 ANKRD62A6NC57 917 aa13.27□□□□□ -0.29
RAD50-201ENST00000378823 MTHFSP49914 203 aa13.27□□□□□ -0.29
RAD50-201ENST00000378823 FYCO1Q9BQS8 1478 aa13.27□□□□□ -0.29
RAD50-201ENST00000378823 INCENPQ9NQS7 918 aa13.26□□□□□ -0.29
RAD50-201ENST00000378823 GAS2L2Q8NHY3 880 aa13.26□□□□□ -0.29
RAD50-201ENST00000378823 CBFA2T2O43439 604 aa13.26□□□□□ -0.29
RAD50-201ENST00000378823 USP8P40818 1118 aa13.26□□□□□ -0.29
RAD50-201ENST00000378823 PDE3AQ14432 1141 aa13.26□□□□□ -0.29
RAD50-201ENST00000378823 FAM177A1Q8N128 213 aaPredicted RBP13.26□□□□□ -0.29
RAD50-201ENST00000378823 SCAPERQ9BY12 1400 aa13.26□□□□□ -0.29
RAD50-201ENST00000378823 CCDC158Q5M9N0 1113 aa13.26□□□□□ -0.29
RAD50-201ENST00000378823 GNL3LQ9NVN8 582 aaKnown RBP13.26□□□□□ -0.29
RAD50-201ENST00000378823 ARHGAP5Q13017 1502 aa13.25□□□□□ -0.29
RAD50-201ENST00000378823 EZRP15311 586 aaKnown RBP13.25□□□□□ -0.29
RAD50-201ENST00000378823 ADAMTS8Q9UP79 889 aa13.25□□□□□ -0.29
RAD50-201ENST00000378823 LRRCC1Q9C099 1032 aa13.25□□□□□ -0.29
RAD50-201ENST00000378823 BRPF3Q9ULD4 1205 aa13.25□□□□□ -0.29
RAD50-201ENST00000378823 K7ELQ4 463 aaPredicted RBP13.25□□□□□ -0.29
RAD50-201ENST00000378823 TTC39AQ5SRH9 613 aa13.25□□□□□ -0.29
RAD50-201ENST00000378823 GRPEL1Q9HAV7 217 aa13.24□□□□□ -0.29
RAD50-201ENST00000378823 LRRFIP2Q9Y608 721 aaKnown RBP13.24□□□□□ -0.29
RAD50-201ENST00000378823 FGD6Q6ZV73 1430 aa13.24□□□□□ -0.29
RAD50-201ENST00000378823 UQCRHLA0A096LP55 91 aa13.24□□□□□ -0.29
RAD50-201ENST00000378823 UQCRHP07919 91 aa13.24□□□□□ -0.29
RAD50-201ENST00000378823 PTPRGP23470 1445 aa13.24□□□□□ -0.29
RAD50-201ENST00000378823 SRCIN1Q9C0H9 1055 aa13.24□□□□□ -0.29
RAD50-201ENST00000378823 PDCL3Q9H2J4 239 aa13.24□□□□□ -0.29
RAD50-201ENST00000378823 PDIA4P13667 645 aaKnown RBP13.24□□□□□ -0.29
RAD50-201ENST00000378823 CNNM1Q9NRU3 951 aa13.24□□□□□ -0.29
RAD50-201ENST00000378823 CCDC69A6NI79 296 aa13.23□□□□□ -0.29
RAD50-201ENST00000378823 NLRP2Q9NX02 1062 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms