RNA–Protein interactions for RNA: ENST00000378362.3

GFRA3-202, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA3, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-202ENST00000378362 AFF2P51816 1311 aa30.74■■■□□ 2.51
GFRA3-202ENST00000378362 HSPA5P11021 654 aaKnown RBP30.74■■■□□ 2.51
GFRA3-202ENST00000378362 ALS2Q96Q42 1657 aa30.74■■■□□ 2.51
GFRA3-202ENST00000378362 ARHGEF10O15013 1369 aa30.73■■■□□ 2.51
GFRA3-202ENST00000378362 ABTB2Q8N961 1025 aa30.72■■■□□ 2.51
GFRA3-202ENST00000378362 TMF1P82094 1093 aa30.71■■■□□ 2.51
GFRA3-202ENST00000378362 EIF4G2P78344 907 aaKnown RBP eCLIP30.7■■■□□ 2.5
GFRA3-202ENST00000378362 USP6P35125 1406 aa30.69■■■□□ 2.5
GFRA3-202ENST00000378362 POLR3GLQ9BT43 218 aa30.67■■■□□ 2.5
GFRA3-202ENST00000378362 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.66■■■□□ 2.5
GFRA3-202ENST00000378362 KTN1Q86UP2 1357 aaKnown RBP30.65■■■□□ 2.5
GFRA3-202ENST00000378362 CD163L1Q9NR16 1453 aa30.65■■■□□ 2.5
GFRA3-202ENST00000378362 ABCA3Q99758 1704 aa30.64■■■□□ 2.49
GFRA3-202ENST00000378362 CPSF1Q10570 1443 aaKnown RBP30.64■■■□□ 2.49
GFRA3-202ENST00000378362 ZNF692Q9BU19 519 aaPredicted RBP30.63■■■□□ 2.49
GFRA3-202ENST00000378362 AKAP12Q02952 1782 aa30.62■■■□□ 2.49
GFRA3-202ENST00000378362 TTC21BQ7Z4L5 1316 aa30.62■■■□□ 2.49
GFRA3-202ENST00000378362 ZNF772Q68DY9 489 aaPredicted RBP30.61■■■□□ 2.49
GFRA3-202ENST00000378362 ZRANB1Q9UGI0 708 aa30.61■■■□□ 2.49
GFRA3-202ENST00000378362 USP21Q9UK80 565 aa30.61■■■□□ 2.49
GFRA3-202ENST00000378362 SSH2Q76I76 1423 aa30.61■■■□□ 2.49
GFRA3-202ENST00000378362 FAM83GA6ND36 823 aa30.61■■■□□ 2.49
GFRA3-202ENST00000378362 NLRP6P59044 892 aa30.61■■■□□ 2.49
GFRA3-202ENST00000378362 ZC3H6P61129 1189 aaKnown RBP30.61■■■□□ 2.49
GFRA3-202ENST00000378362 MARF1Q9Y4F3 1742 aaKnown RBP30.61■■■□□ 2.49
GFRA3-202ENST00000378362 A0A1W2PP64 1363 aa30.6■■■□□ 2.49
GFRA3-202ENST00000378362 PUS7Q96PZ0 661 aaKnown RBP30.59■■■□□ 2.49
GFRA3-202ENST00000378362 SLC24A1O60721 1099 aa30.59■■■□□ 2.49
GFRA3-202ENST00000378362 HDGFL2Q7Z4V5 671 aaPredicted RBP30.59■■■□□ 2.49
GFRA3-202ENST00000378362 QTRT2Q9H974 415 aaKnown RBP30.59■■■□□ 2.49
GFRA3-202ENST00000378362 FNBP4Q8N3X1 1017 aaPredicted RBP30.58■■■□□ 2.49
GFRA3-202ENST00000378362 SOX12O15370 315 aa30.57■■■□□ 2.48
GFRA3-202ENST00000378362 C11orf95C9JLR9 678 aaPredicted RBP30.57■■■□□ 2.48
GFRA3-202ENST00000378362 CHRNA2Q15822 529 aa30.57■■■□□ 2.48
GFRA3-202ENST00000378362 CRYBG1Q9Y4K1 1723 aa30.56■■■□□ 2.48
GFRA3-202ENST00000378362 NLRP13Q86W25 1043 aa30.56■■■□□ 2.48
GFRA3-202ENST00000378362 TERF2IPQ9NYB0 399 aa30.56■■■□□ 2.48
GFRA3-202ENST00000378362 NME9Q86XW9 330 aa30.55■■■□□ 2.48
GFRA3-202ENST00000378362 PIK3C2AO00443 1686 aa30.55■■■□□ 2.48
GFRA3-202ENST00000378362 ZBTB7CA1YPR0 619 aa30.54■■■□□ 2.48
GFRA3-202ENST00000378362 MON2Q7Z3U7 1717 aa30.53■■■□□ 2.48
GFRA3-202ENST00000378362 BCL9LQ86UU0 1499 aa30.53■■■□□ 2.48
GFRA3-202ENST00000378362 KIAA0232Q92628 1395 aa30.53■■■□□ 2.48
GFRA3-202ENST00000378362 GCP02774 474 aa30.52■■■□□ 2.48
GFRA3-202ENST00000378362 CDCA8Q53HL2 280 aa30.52■■■□□ 2.48
GFRA3-202ENST00000378362 PRDM11Q9NQV5 511 aa30.52■■■□□ 2.48
GFRA3-202ENST00000378362 PHRF1Q9P1Y6 1649 aaKnown RBP30.52■■■□□ 2.48
GFRA3-202ENST00000378362 NRKQ7Z2Y5 1582 aa30.51■■■□□ 2.47
GFRA3-202ENST00000378362 USP19O94966 1318 aa30.5■■■□□ 2.47
GFRA3-202ENST00000378362 BTG4Q9NY30 223 aa30.5■■■□□ 2.47
GFRA3-202ENST00000378362 BRD4O60885 1362 aaPredicted RBP30.49■■■□□ 2.47
GFRA3-202ENST00000378362 RXRBP28702 533 aa30.49■■■□□ 2.47
GFRA3-202ENST00000378362 SLIT2O94813 1529 aa30.48■■■□□ 2.47
GFRA3-202ENST00000378362 UNC5CLQ8IV45 518 aa30.47■■■□□ 2.47
GFRA3-202ENST00000378362 TTC21AQ8NDW8 1320 aa30.47■■■□□ 2.47
GFRA3-202ENST00000378362 NINLQ9Y2I6 1382 aa30.45■■■□□ 2.47
GFRA3-202ENST00000378362 TRPC5Q9UL62 973 aaPredicted RBP30.45■■■□□ 2.47
GFRA3-202ENST00000378362 PLCH1Q4KWH8 1693 aa30.45■■■□□ 2.47
GFRA3-202ENST00000378362 EDC4Q6P2E9 1401 aaKnown RBP30.45■■■□□ 2.46
GFRA3-202ENST00000378362 ANKRD36BQ8N2N9 1353 aa30.45■■■□□ 2.46
GFRA3-202ENST00000378362 MYOM1P52179 1685 aa30.45■■■□□ 2.46
GFRA3-202ENST00000378362 CARD14Q9BXL6 1004 aa30.43■■■□□ 2.46
GFRA3-202ENST00000378362 CCDC9Q9Y3X0 531 aaKnown RBP30.43■■■□□ 2.46
GFRA3-202ENST00000378362 RBM6P78332 1123 aaKnown RBP30.41■■■□□ 2.46
GFRA3-202ENST00000378362 ATRNO75882 1429 aa30.4■■■□□ 2.46
GFRA3-202ENST00000378362 STRN4Q9NRL3 753 aa30.4■■■□□ 2.46
GFRA3-202ENST00000378362 FBLN1P23142 703 aa30.4■■■□□ 2.46
GFRA3-202ENST00000378362 COL14A1Q05707 1796 aaKnown RBP30.38■■■□□ 2.45
GFRA3-202ENST00000378362 GJD4Q96KN9 370 aaPredicted RBP30.38■■■□□ 2.45
GFRA3-202ENST00000378362 EP400Q96L91 3159 aa30.38■■■□□ 2.45
GFRA3-202ENST00000378362 SLIT3O75094 1523 aa30.37■■■□□ 2.45
GFRA3-202ENST00000378362 GGNBP2Q9H3C7 697 aa30.37■■■□□ 2.45
GFRA3-202ENST00000378362 KIF7Q2M1P5 1343 aa30.35■■■□□ 2.45
GFRA3-202ENST00000378362 FYB1O15117 783 aa30.34■■■□□ 2.45
GFRA3-202ENST00000378362 USP31Q70CQ4 1352 aa30.34■■■□□ 2.45
GFRA3-202ENST00000378362 NWD2Q9ULI1 1742 aa30.34■■■□□ 2.45
GFRA3-202ENST00000378362 AXIN2Q9Y2T1 843 aa30.33■■■□□ 2.45
GFRA3-202ENST00000378362 CPDO75976 1380 aa30.33■■■□□ 2.45
GFRA3-202ENST00000378362 NSD3Q9BZ95 1437 aa30.33■■■□□ 2.45
GFRA3-202ENST00000378362 CAMTA1Q9Y6Y1 1673 aa30.33■■■□□ 2.45
GFRA3-202ENST00000378362 VPS72Q15906 364 aa30.33■■■□□ 2.45
GFRA3-202ENST00000378362 PANK3Q9H999 370 aa30.33■■■□□ 2.45
GFRA3-202ENST00000378362 KCNH5Q8NCM2 988 aa30.32■■■□□ 2.44
GFRA3-202ENST00000378362 RGS12O14924 1447 aa30.32■■■□□ 2.44
GFRA3-202ENST00000378362 NRAPQ86VF7 1730 aa30.32■■■□□ 2.44
GFRA3-202ENST00000378362 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.32■■■□□ 2.44
GFRA3-202ENST00000378362 EVA1CP58658 441 aa30.31■■■□□ 2.44
GFRA3-202ENST00000378362 USP35Q9P2H5 1018 aa30.31■■■□□ 2.44
GFRA3-202ENST00000378362 ARHGEF25Q86VW2 580 aa30.31■■■□□ 2.44
GFRA3-202ENST00000378362 SOCS7O14512 581 aa30.3■■■□□ 2.44
GFRA3-202ENST00000378362 COG3Q96JB2 828 aa30.3■■■□□ 2.44
GFRA3-202ENST00000378362 GLI3P10071 1580 aa30.3■■■□□ 2.44
GFRA3-202ENST00000378362 OVOS2A0A0J9YW53 1432 aa30.29■■■□□ 2.44
GFRA3-202ENST00000378362 OVOS2Q6IE36 1432 aa30.29■■■□□ 2.44
GFRA3-202ENST00000378362 NFAT5O94916 1531 aa30.29■■■□□ 2.44
GFRA3-202ENST00000378362 LARP1Q6PKG0 1096 aaKnown RBP30.29■■■□□ 2.44
GFRA3-202ENST00000378362 FAM98CQ17RN3 349 aaKnown RBP30.26■■■□□ 2.43
GFRA3-202ENST00000378362 RGPD5Q99666 1765 aa30.26■■■□□ 2.43
GFRA3-202ENST00000378362 LMO7Q8WWI1 1683 aa30.25■■■□□ 2.43
GFRA3-202ENST00000378362 WASHC2AQ641Q2 1341 aa30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms