RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 RBM42Q9BTD8 480 aaKnown RBP23.95■■□□□ 1.43
PCDH8-202ENST00000377942 CPLX1O14810 134 aa23.95■■□□□ 1.42
PCDH8-202ENST00000377942 TRIM29Q14134 588 aa23.94■■□□□ 1.42
PCDH8-202ENST00000377942 ERC1Q8IUD2 1116 aa23.94■■□□□ 1.42
PCDH8-202ENST00000377942 GNAI2P04899 355 aa23.94■■□□□ 1.42
PCDH8-202ENST00000377942 WAPLQ7Z5K2 1190 aa23.94■■□□□ 1.42
PCDH8-202ENST00000377942 GCC1Q96CN9 775 aa23.94■■□□□ 1.42
PCDH8-202ENST00000377942 RPRD2Q5VT52 1461 aaKnown RBP23.94■■□□□ 1.42
PCDH8-202ENST00000377942 SURF6O75683 361 aaKnown RBP23.94■■□□□ 1.42
PCDH8-202ENST00000377942 SLC4A2P04920 1241 aa23.94■■□□□ 1.42
PCDH8-202ENST00000377942 FBXO31Q5XUX0 539 aaPredicted RBP23.93■■□□□ 1.42
PCDH8-202ENST00000377942 ADGRF5Q8IZF2 1346 aa23.93■■□□□ 1.42
PCDH8-202ENST00000377942 RRS1Q15050 365 aaKnown RBP23.93■■□□□ 1.42
PCDH8-202ENST00000377942 TSR2Q969E8 191 aaKnown RBP23.92■■□□□ 1.42
PCDH8-202ENST00000377942 TEX14Q8IWB6 1497 aa23.92■■□□□ 1.42
PCDH8-202ENST00000377942 NFE2L2Q16236 605 aa23.92■■□□□ 1.42
PCDH8-202ENST00000377942 CNTROBQ8N137 903 aa23.91■■□□□ 1.42
PCDH8-202ENST00000377942 FOXD4L5Q5VV16 416 aaPredicted RBP23.91■■□□□ 1.42
PCDH8-202ENST00000377942 FOXD4L4Q8WXT5 416 aaPredicted RBP23.91■■□□□ 1.42
PCDH8-202ENST00000377942 NOB1Q9ULX3 412 aaKnown RBP23.9■■□□□ 1.42
PCDH8-202ENST00000377942 AMOTL2Q9Y2J4 779 aa23.9■■□□□ 1.42
PCDH8-202ENST00000377942 ASXL2Q76L83 1435 aa23.9■■□□□ 1.42
PCDH8-202ENST00000377942 ERICH2A1L162 156 aa23.9■■□□□ 1.42
PCDH8-202ENST00000377942 C14orf93Q9H972 538 aaKnown RBP23.9■■□□□ 1.42
PCDH8-202ENST00000377942 WASLO00401 505 aaPredicted RBP23.9■■□□□ 1.42
PCDH8-202ENST00000377942 SCAF11Q99590 1463 aaKnown RBP23.9■■□□□ 1.42
PCDH8-202ENST00000377942 KDM5BQ9UGL1 1544 aa23.89■■□□□ 1.42
PCDH8-202ENST00000377942 DDX49Q9Y6V7 483 aaKnown RBP23.89■■□□□ 1.41
PCDH8-202ENST00000377942 UGGT2Q9NYU1 1516 aa23.89■■□□□ 1.41
PCDH8-202ENST00000377942 SRCIN1Q9C0H9 1055 aa23.88■■□□□ 1.41
PCDH8-202ENST00000377942 VPS53Q5VIR6 699 aa23.88■■□□□ 1.41
PCDH8-202ENST00000377942 C22orf23Q9BZE7 217 aa23.88■■□□□ 1.41
PCDH8-202ENST00000377942 ATF7IPQ6VMQ6 1270 aa23.88■■□□□ 1.41
PCDH8-202ENST00000377942 NUP153P49790 1475 aaKnown RBP23.88■■□□□ 1.41
PCDH8-202ENST00000377942 HIP1O00291 1037 aa23.87■■□□□ 1.41
PCDH8-202ENST00000377942 MCTP1Q6DN14 999 aa23.87■■□□□ 1.41
PCDH8-202ENST00000377942 DDX54Q8TDD1 881 aaKnown RBP23.87■■□□□ 1.41
PCDH8-202ENST00000377942 CHMP5Q9NZZ3 219 aa23.87■■□□□ 1.41
PCDH8-202ENST00000377942 NOS1P29475 1434 aa23.87■■□□□ 1.41
PCDH8-202ENST00000377942 HMGB2P26583 209 aaKnown RBP23.87■■□□□ 1.41
PCDH8-202ENST00000377942 RALYLQ86SE5 291 aaKnown RBP23.87■■□□□ 1.41
PCDH8-202ENST00000377942 WASHC4Q2M389 1173 aa23.87■■□□□ 1.41
PCDH8-202ENST00000377942 PHF8Q9UPP1 1060 aa23.87■■□□□ 1.41
PCDH8-202ENST00000377942 TMPOP42166 694 aaKnown RBP23.86■■□□□ 1.41
PCDH8-202ENST00000377942 TBC1D2BQ9UPU7 963 aa23.86■■□□□ 1.41
PCDH8-202ENST00000377942 DUOX2Q9NRD8 1548 aa23.85■■□□□ 1.41
PCDH8-202ENST00000377942 RTN4Q9NQC3 1192 aaKnown RBP23.85■■□□□ 1.41
PCDH8-202ENST00000377942 FANCIQ9NVI1 1328 aa23.85■■□□□ 1.41
PCDH8-202ENST00000377942 ITSN2Q9NZM3 1697 aa23.84■■□□□ 1.41
PCDH8-202ENST00000377942 ADAMTS12P58397 1594 aa23.84■■□□□ 1.41
PCDH8-202ENST00000377942 NUCB2P80303 420 aa23.84■■□□□ 1.41
PCDH8-202ENST00000377942 NFXL1Q6ZNB6 911 aa23.84■■□□□ 1.41
PCDH8-202ENST00000377942 FSD1Q9BTV5 496 aa23.84■■□□□ 1.41
PCDH8-202ENST00000377942 FBXW7Q969H0 707 aa23.84■■□□□ 1.41
PCDH8-202ENST00000377942 GNAT3A8MTJ3 354 aa23.84■■□□□ 1.41
PCDH8-202ENST00000377942 NUTM2BA6NNL0 878 aaPredicted RBP23.83■■□□□ 1.41
PCDH8-202ENST00000377942 NUTM2EB1AL46 878 aaPredicted RBP23.83■■□□□ 1.41
PCDH8-202ENST00000377942 PSMA5P28066 241 aa23.83■■□□□ 1.41
PCDH8-202ENST00000377942 NUTM2AQ8IVF1 878 aaPredicted RBP23.83■■□□□ 1.41
PCDH8-202ENST00000377942 NSD2O96028 1365 aa23.83■■□□□ 1.41
PCDH8-202ENST00000377942 SMC3Q9UQE7 1217 aa23.83■■□□□ 1.41
PCDH8-202ENST00000377942 WDR7Q9Y4E6 1490 aa23.83■■□□□ 1.41
PCDH8-202ENST00000377942 ABCC11Q96J66 1382 aa23.83■■□□□ 1.41
PCDH8-202ENST00000377942 BCAR3O75815 825 aa23.83■■□□□ 1.4
PCDH8-202ENST00000377942 ZC3H6P61129 1189 aaKnown RBP23.83■■□□□ 1.4
PCDH8-202ENST00000377942 CTDP1Q9Y5B0 961 aaPredicted RBP23.83■■□□□ 1.4
PCDH8-202ENST00000377942 CEBPAP49715 358 aaPredicted RBP23.82■■□□□ 1.4
PCDH8-202ENST00000377942 TNRQ92752 1358 aa23.82■■□□□ 1.4
PCDH8-202ENST00000377942 SLC4A3P48751 1232 aa23.82■■□□□ 1.4
PCDH8-202ENST00000377942 BTBD11A6QL63 1104 aa23.82■■□□□ 1.4
PCDH8-202ENST00000377942 XPCQ01831 940 aaPredicted RBP23.81■■□□□ 1.4
PCDH8-202ENST00000377942 ZNF518AQ6AHZ1 1483 aa23.81■■□□□ 1.4
PCDH8-202ENST00000377942 PDZRN3Q9UPQ7 1066 aa23.81■■□□□ 1.4
PCDH8-202ENST00000377942 A2MP01023 1474 aa23.8■■□□□ 1.4
PCDH8-202ENST00000377942 MVPQ14764 893 aaKnown RBP23.8■■□□□ 1.4
PCDH8-202ENST00000377942 AMOTQ4VCS5 1084 aa23.8■■□□□ 1.4
PCDH8-202ENST00000377942 SLFN5Q08AF3 891 aa23.79■■□□□ 1.4
PCDH8-202ENST00000377942 CTTNBP2Q8WZ74 1663 aa23.79■■□□□ 1.4
PCDH8-202ENST00000377942 DHX16O60231 1041 aaKnown RBP23.78■■□□□ 1.4
PCDH8-202ENST00000377942 KIAA0556O60303 1618 aa23.78■■□□□ 1.4
PCDH8-202ENST00000377942 SAFBQ15424 915 aaKnown RBP eCLIP23.78■■□□□ 1.4
PCDH8-202ENST00000377942 DMRT2Q9Y5R5 561 aa23.78■■□□□ 1.4
PCDH8-202ENST00000377942 GOLGA6L19H0YKK7 550 aa23.77■■□□□ 1.4
PCDH8-202ENST00000377942 TPD52L1Q16890 204 aaPredicted RBP23.77■■□□□ 1.4
PCDH8-202ENST00000377942 LRPPRCP42704 1394 aaKnown RBP23.77■■□□□ 1.4
PCDH8-202ENST00000377942 CCDC27Q2M243 656 aa23.77■■□□□ 1.4
PCDH8-202ENST00000377942 NME9Q86XW9 330 aa23.77■■□□□ 1.4
PCDH8-202ENST00000377942 BECN2A8MW95 431 aa23.77■■□□□ 1.4
PCDH8-202ENST00000377942 CCDC158Q5M9N0 1113 aa23.77■■□□□ 1.4
PCDH8-202ENST00000377942 GNL3LQ9NVN8 582 aaKnown RBP23.77■■□□□ 1.4
PCDH8-202ENST00000377942 RAD21O60216 631 aa23.76■■□□□ 1.39
PCDH8-202ENST00000377942 CCDC47Q96A33 483 aaKnown RBP23.76■■□□□ 1.39
PCDH8-202ENST00000377942 CNNM1Q9NRU3 951 aa23.76■■□□□ 1.39
PCDH8-202ENST00000377942 FAM177BA6PVY3 158 aa23.76■■□□□ 1.39
PCDH8-202ENST00000377942 CREBRFQ8IUR6 639 aa23.75■■□□□ 1.39
PCDH8-202ENST00000377942 LRRCC1Q9C099 1032 aa23.75■■□□□ 1.39
PCDH8-202ENST00000377942 CCDC184Q52MB2 194 aa23.75■■□□□ 1.39
PCDH8-202ENST00000377942 IFT57Q9NWB7 429 aa23.75■■□□□ 1.39
PCDH8-202ENST00000377942 HOOK1Q9UJC3 728 aaKnown RBP23.74■■□□□ 1.39
PCDH8-202ENST00000377942 MCM2P49736 904 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms