RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 SLC4A2P04920 1241 aa21.43■■□□□ 1.02
CNTNAP3-204ENST00000377656 SUPT6HQ7KZ85 1726 aaKnown RBP21.42■■□□□ 1.02
CNTNAP3-204ENST00000377656 HECW1Q76N89 1606 aa21.42■■□□□ 1.02
CNTNAP3-204ENST00000377656 WWC1Q8IX03 1113 aa21.42■■□□□ 1.02
CNTNAP3-204ENST00000377656 AKNAQ7Z591 1439 aa21.41■■□□□ 1.02
CNTNAP3-204ENST00000377656 NOB1Q9ULX3 412 aaKnown RBP21.41■■□□□ 1.02
CNTNAP3-204ENST00000377656 ERC1Q8IUD2 1116 aa21.41■■□□□ 1.02
CNTNAP3-204ENST00000377656 FYB1O15117 783 aa21.41■■□□□ 1.02
CNTNAP3-204ENST00000377656 CT47B1P0C2W7 299 aaPredicted RBP21.41■■□□□ 1.02
CNTNAP3-204ENST00000377656 RPGRIP1LQ68CZ1 1315 aa21.41■■□□□ 1.02
CNTNAP3-204ENST00000377656 DAPK1P53355 1430 aa21.41■■□□□ 1.02
CNTNAP3-204ENST00000377656 NEK4P51957 841 aa21.4■■□□□ 1.02
CNTNAP3-204ENST00000377656 HOMER1Q86YM7 354 aa21.4■■□□□ 1.02
CNTNAP3-204ENST00000377656 WDR63Q8IWG1 891 aa21.4■■□□□ 1.02
CNTNAP3-204ENST00000377656 RBM42Q9BTD8 480 aaKnown RBP21.4■■□□□ 1.02
CNTNAP3-204ENST00000377656 HIP1O00291 1037 aa21.4■■□□□ 1.02
CNTNAP3-204ENST00000377656 CCDC184Q52MB2 194 aa21.4■■□□□ 1.02
CNTNAP3-204ENST00000377656 RSPH6AQ9H0K4 717 aa21.4■■□□□ 1.02
CNTNAP3-204ENST00000377656 RAPGEF3O95398 923 aa21.4■■□□□ 1.02
CNTNAP3-204ENST00000377656 C1orf115Q9H7X2 142 aa21.4■■□□□ 1.02
CNTNAP3-204ENST00000377656 BCAR3O75815 825 aa21.4■■□□□ 1.02
CNTNAP3-204ENST00000377656 XBP1P17861 261 aa21.4■■□□□ 1.02
CNTNAP3-204ENST00000377656 KIF6Q6ZMV9 814 aa21.39■■□□□ 1.02
CNTNAP3-204ENST00000377656 NFKBIBQ15653 356 aa21.39■■□□□ 1.02
CNTNAP3-204ENST00000377656 CCDC43Q96MW1 224 aaKnown RBP21.39■■□□□ 1.02
CNTNAP3-204ENST00000377656 ANKRD30BQ9BXX2 1392 aa21.39■■□□□ 1.01
CNTNAP3-204ENST00000377656 HSP90AA2PQ14568 343 aaPredicted RBP21.39■■□□□ 1.01
CNTNAP3-204ENST00000377656 SART3Q15020 963 aaKnown RBP21.39■■□□□ 1.01
CNTNAP3-204ENST00000377656 DNAJC2Q99543 621 aaKnown RBP21.39■■□□□ 1.01
CNTNAP3-204ENST00000377656 FAM177BA6PVY3 158 aa21.39■■□□□ 1.01
CNTNAP3-204ENST00000377656 MCM2P49736 904 aa21.39■■□□□ 1.01
CNTNAP3-204ENST00000377656 GPS2Q13227 327 aa21.39■■□□□ 1.01
CNTNAP3-204ENST00000377656 BRMS1Q9HCU9 246 aa21.39■■□□□ 1.01
CNTNAP3-204ENST00000377656 STRN4Q9NRL3 753 aa21.38■■□□□ 1.01
CNTNAP3-204ENST00000377656 ZNF530Q6P9A1 599 aaPredicted RBP21.38■■□□□ 1.01
CNTNAP3-204ENST00000377656 SDF4Q9BRK5 362 aa21.38■■□□□ 1.01
CNTNAP3-204ENST00000377656 RTEL1-TNFRSF6BF6WH68 1400 aa21.38■■□□□ 1.01
CNTNAP3-204ENST00000377656 CCT4P50991 539 aaKnown RBP21.38■■□□□ 1.01
CNTNAP3-204ENST00000377656 SLC26A8Q96RN1 970 aa21.37■■□□□ 1.01
CNTNAP3-204ENST00000377656 DNMBPQ6XZF7 1577 aa21.37■■□□□ 1.01
CNTNAP3-204ENST00000377656 ERBINQ96RT1 1412 aa21.37■■□□□ 1.01
CNTNAP3-204ENST00000377656 PCF11O94913 1555 aaKnown RBP21.36■■□□□ 1.01
CNTNAP3-204ENST00000377656 PDCP20941 246 aa21.36■■□□□ 1.01
CNTNAP3-204ENST00000377656 RABEP1Q15276 862 aa21.36■■□□□ 1.01
CNTNAP3-204ENST00000377656 ATF7IPQ6VMQ6 1270 aa21.36■■□□□ 1.01
CNTNAP3-204ENST00000377656 SRCIN1Q9C0H9 1055 aa21.36■■□□□ 1.01
CNTNAP3-204ENST00000377656 ATAD2Q6PL18 1390 aa21.35■■□□□ 1.01
CNTNAP3-204ENST00000377656 SAMD1Q6SPF0 538 aaPredicted RBP21.35■■□□□ 1.01
CNTNAP3-204ENST00000377656 ANO8Q9HCE9 1232 aaPredicted RBP21.35■■□□□ 1.01
CNTNAP3-204ENST00000377656 SNAPC4Q5SXM2 1469 aa21.33■■□□□ 1.01
CNTNAP3-204ENST00000377656 ABCA10Q8WWZ4 1543 aa21.33■■□□□ 1.01
CNTNAP3-204ENST00000377656 CABP4P57796 275 aa21.33■■□□□ 1.01
CNTNAP3-204ENST00000377656 AEBP2Q6ZN18 517 aaPredicted RBP21.33■■□□□ 1.01
CNTNAP3-204ENST00000377656 NAT10Q9H0A0 1025 aaKnown RBP21.33■■□□□ 1.01
CNTNAP3-204ENST00000377656 ANKLE2Q86XL3 938 aa21.33■■□□□ 1
CNTNAP3-204ENST00000377656 TOM1L2Q6ZVM7 507 aa21.32■■□□□ 1
CNTNAP3-204ENST00000377656 MBD3O95983 291 aa21.32■■□□□ 1
CNTNAP3-204ENST00000377656 CCDC158Q5M9N0 1113 aa21.32■■□□□ 1
CNTNAP3-204ENST00000377656 CNNM1Q9NRU3 951 aa21.31■■□□□ 1
CNTNAP3-204ENST00000377656 SPG7Q9UQ90 795 aa21.31■■□□□ 1
CNTNAP3-204ENST00000377656 OLFM4Q6UX06 510 aa21.31■■□□□ 1
CNTNAP3-204ENST00000377656 LRRCC1Q9C099 1032 aa21.31■■□□□ 1
CNTNAP3-204ENST00000377656 EPRSP07814 1512 aaKnown RBP21.31■■□□□ 1
CNTNAP3-204ENST00000377656 FCHSD2O94868 740 aa21.3■■□□□ 1
CNTNAP3-204ENST00000377656 KLHL34Q8N239 644 aa21.3■■□□□ 1
CNTNAP3-204ENST00000377656 BACH2Q9BYV9 841 aa21.3■■□□□ 1
CNTNAP3-204ENST00000377656 MTMR7Q9Y216 660 aa21.3■■□□□ 1
CNTNAP3-204ENST00000377656 MRE11P49959 708 aa21.3■■□□□ 1
CNTNAP3-204ENST00000377656 MVPQ14764 893 aaKnown RBP21.3■■□□□ 1
CNTNAP3-204ENST00000377656 DDX54Q8TDD1 881 aaKnown RBP21.29■■□□□ 1
CNTNAP3-204ENST00000377656 IFT57Q9NWB7 429 aa21.29■■□□□ 1
CNTNAP3-204ENST00000377656 CCDC61Q9Y6R9 512 aa21.29■■□□□ 1
CNTNAP3-204ENST00000377656 ZNF428Q96B54 188 aa21.29■■□□□ 1
CNTNAP3-204ENST00000377656 TRAK2O60296 914 aa21.28■■□□□ 1
CNTNAP3-204ENST00000377656 FAM43AQ8N2R8 423 aa21.28■■□□□ 1
CNTNAP3-204ENST00000377656 RRS1Q15050 365 aaKnown RBP21.28■■□□□ 1
CNTNAP3-204ENST00000377656 ATP2B1P20020 1258 aa21.28■■□□□ 1
CNTNAP3-204ENST00000377656 NASPP49321 788 aaPredicted RBP21.28■■□□□ 1
CNTNAP3-204ENST00000377656 RNF214Q8ND24 703 aa21.28■■□□□ 1
CNTNAP3-204ENST00000377656 KINO60870 393 aaKnown RBP21.27■■□□□ 1
CNTNAP3-204ENST00000377656 SLC3A2P08195 630 aaKnown RBP21.27■■□□□ 1
CNTNAP3-204ENST00000377656 PRDM11Q9NQV5 511 aa21.27■■□□□ 1
CNTNAP3-204ENST00000377656 GNL3LQ9NVN8 582 aaKnown RBP21.27■■□□□ 1
CNTNAP3-204ENST00000377656 PEG3Q9GZU2 1588 aa21.27■■□□□ 1
CNTNAP3-204ENST00000377656 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.27■■□□□ 1
CNTNAP3-204ENST00000377656 TTC39AQ5SRH9 613 aa21.27■□□□□ 0.99
CNTNAP3-204ENST00000377656 IKQ13123 557 aaPredicted RBP21.26■□□□□ 0.99
CNTNAP3-204ENST00000377656 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.26■□□□□ 0.99
CNTNAP3-204ENST00000377656 RRP12Q5JTH9 1297 aaKnown RBP21.26■□□□□ 0.99
CNTNAP3-204ENST00000377656 SIL1Q9H173 461 aa21.26■□□□□ 0.99
CNTNAP3-204ENST00000377656 KIAA0586Q9BVV6 1533 aa21.25■□□□□ 0.99
CNTNAP3-204ENST00000377656 CAVIN1Q6NZI2 390 aaKnown RBP21.25■□□□□ 0.99
CNTNAP3-204ENST00000377656 CWC22Q9HCG8 908 aaKnown RBP21.25■□□□□ 0.99
CNTNAP3-204ENST00000377656 BICRAQ9NZM4 1560 aa21.25■□□□□ 0.99
CNTNAP3-204ENST00000377656 CYP46A1Q9Y6A2 500 aa21.25■□□□□ 0.99
CNTNAP3-204ENST00000377656 LETM1O95202 739 aaPredicted RBP21.25■□□□□ 0.99
CNTNAP3-204ENST00000377656 KDM4AO75164 1064 aa21.24■□□□□ 0.99
CNTNAP3-204ENST00000377656 OFD1O75665 1012 aa21.24■□□□□ 0.99
CNTNAP3-204ENST00000377656 NUDT16Q96DE0 195 aaKnown RBP21.24■□□□□ 0.99
CNTNAP3-204ENST00000377656 PRPF40AO75400 957 aaKnown RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms