RNA–Protein interactions for RNA: ENST00000377142.4

NKX2-2-201, Transcript of NK2 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-2, Length 2,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2-201ENST00000377142 NCBP3Q53F19 620 aaKnown RBP22.98■■□□□ 1.27
NKX2-2-201ENST00000377142 PNPLA6Q8IY17 1366 aa22.97■■□□□ 1.27
NKX2-2-201ENST00000377142 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.97■■□□□ 1.27
NKX2-2-201ENST00000377142 NRKQ7Z2Y5 1582 aa22.96■■□□□ 1.27
NKX2-2-201ENST00000377142 PRR36Q9H6K5 1346 aa22.96■■□□□ 1.27
NKX2-2-201ENST00000377142 U2AF1L5P0DN76 240 aaPredicted RBP22.96■■□□□ 1.27
NKX2-2-201ENST00000377142 U2AF1Q01081 240 aaKnown RBP eCLIP22.96■■□□□ 1.27
NKX2-2-201ENST00000377142 WWC1Q8IX03 1113 aa22.95■■□□□ 1.26
NKX2-2-201ENST00000377142 TCP11L2Q8N4U5 519 aa22.95■■□□□ 1.26
NKX2-2-201ENST00000377142 ZNF692Q9BU19 519 aaPredicted RBP22.95■■□□□ 1.26
NKX2-2-201ENST00000377142 CCDC136Q96JN2 1154 aa22.94■■□□□ 1.26
NKX2-2-201ENST00000377142 AMOTL2Q9Y2J4 779 aa22.94■■□□□ 1.26
NKX2-2-201ENST00000377142 MAP2P11137 1827 aaKnown RBP22.94■■□□□ 1.26
NKX2-2-201ENST00000377142 PIK3R4Q99570 1358 aa22.93■■□□□ 1.26
NKX2-2-201ENST00000377142 CCDC27Q2M243 656 aa22.93■■□□□ 1.26
NKX2-2-201ENST00000377142 PHF23Q9BUL5 403 aaPredicted RBP22.93■■□□□ 1.26
NKX2-2-201ENST00000377142 SPINK5Q9NQ38 1064 aaPredicted RBP22.91■■□□□ 1.26
NKX2-2-201ENST00000377142 NCKAP5LQ9HCH0 1330 aa22.91■■□□□ 1.26
NKX2-2-201ENST00000377142 AATKQ6ZMQ8 1374 aa22.9■■□□□ 1.26
NKX2-2-201ENST00000377142 DIAPH1O60610 1272 aaKnown RBP22.9■■□□□ 1.26
NKX2-2-201ENST00000377142 EXOC6Q8TAG9 804 aa22.89■■□□□ 1.26
NKX2-2-201ENST00000377142 DNAJC5Q9H3Z4 198 aa22.89■■□□□ 1.26
NKX2-2-201ENST00000377142 CDK12Q9NYV4 1490 aaPredicted RBP22.89■■□□□ 1.26
NKX2-2-201ENST00000377142 U2SURPO15042 1029 aaKnown RBP22.89■■□□□ 1.25
NKX2-2-201ENST00000377142 WDR63Q8IWG1 891 aa22.89■■□□□ 1.25
NKX2-2-201ENST00000377142 PLEKHG3A1L390 1219 aa22.88■■□□□ 1.25
NKX2-2-201ENST00000377142 NME9Q86XW9 330 aa22.88■■□□□ 1.25
NKX2-2-201ENST00000377142 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.88■■□□□ 1.25
NKX2-2-201ENST00000377142 SETD1BQ9UPS6 1966 aaKnown RBP22.88■■□□□ 1.25
NKX2-2-201ENST00000377142 POLKQ9UBT6 870 aa22.88■■□□□ 1.25
NKX2-2-201ENST00000377142 DMRT2Q9Y5R5 561 aa22.88■■□□□ 1.25
NKX2-2-201ENST00000377142 COG3Q96JB2 828 aa22.87■■□□□ 1.25
NKX2-2-201ENST00000377142 PNNQ9H307 717 aaKnown RBP22.87■■□□□ 1.25
NKX2-2-201ENST00000377142 RRP7AQ9Y3A4 280 aaKnown RBP22.87■■□□□ 1.25
NKX2-2-201ENST00000377142 NEUROD2Q15784 382 aa22.86■■□□□ 1.25
NKX2-2-201ENST00000377142 PLIN1O60240 522 aa22.86■■□□□ 1.25
NKX2-2-201ENST00000377142 PLEKHF1Q96S99 279 aa22.86■■□□□ 1.25
NKX2-2-201ENST00000377142 USP6P35125 1406 aa22.85■■□□□ 1.25
NKX2-2-201ENST00000377142 MAPK8IP3Q9UPT6 1336 aa22.85■■□□□ 1.25
NKX2-2-201ENST00000377142 ACEP12821 1306 aa22.84■■□□□ 1.25
NKX2-2-201ENST00000377142 CHD2O14647 1828 aaKnown RBP22.84■■□□□ 1.25
NKX2-2-201ENST00000377142 NALCNQ8IZF0 1738 aa22.84■■□□□ 1.25
NKX2-2-201ENST00000377142 LRRC7Q96NW7 1537 aa22.84■■□□□ 1.25
NKX2-2-201ENST00000377142 ANKLE2Q86XL3 938 aa22.83■■□□□ 1.24
NKX2-2-201ENST00000377142 FMN2Q9NZ56 1722 aa22.82■■□□□ 1.24
NKX2-2-201ENST00000377142 TTC21BQ7Z4L5 1316 aa22.82■■□□□ 1.24
NKX2-2-201ENST00000377142 ANKARQ7Z5J8 1434 aa22.82■■□□□ 1.24
NKX2-2-201ENST00000377142 RGPD8O14715 1765 aaPredicted RBP22.81■■□□□ 1.24
NKX2-2-201ENST00000377142 OVOS2A0A0J9YW53 1432 aa22.8■■□□□ 1.24
NKX2-2-201ENST00000377142 OVOS2Q6IE36 1432 aa22.8■■□□□ 1.24
NKX2-2-201ENST00000377142 CRBNQ96SW2 442 aa22.8■■□□□ 1.24
NKX2-2-201ENST00000377142 ZRANB1Q9UGI0 708 aa22.8■■□□□ 1.24
NKX2-2-201ENST00000377142 PPM1GO15355 546 aaPredicted RBP22.79■■□□□ 1.24
NKX2-2-201ENST00000377142 FCHSD2O94868 740 aa22.79■■□□□ 1.24
NKX2-2-201ENST00000377142 TMPOP42166 694 aaKnown RBP22.79■■□□□ 1.24
NKX2-2-201ENST00000377142 SSH2Q76I76 1423 aa22.79■■□□□ 1.24
NKX2-2-201ENST00000377142 KCNA6P17658 529 aa22.78■■□□□ 1.24
NKX2-2-201ENST00000377142 MYH16Q9H6N6 1097 aa22.78■■□□□ 1.24
NKX2-2-201ENST00000377142 EMILIN1Q9Y6C2 1016 aa22.78■■□□□ 1.24
NKX2-2-201ENST00000377142 NUTM2FA1L443 756 aa22.78■■□□□ 1.24
NKX2-2-201ENST00000377142 FBLN1P23142 703 aa22.77■■□□□ 1.24
NKX2-2-201ENST00000377142 TTC21AQ8NDW8 1320 aa22.76■■□□□ 1.23
NKX2-2-201ENST00000377142 C20orf194Q5TEA3 1177 aa22.75■■□□□ 1.23
NKX2-2-201ENST00000377142 RSPH6AQ9H0K4 717 aa22.75■■□□□ 1.23
NKX2-2-201ENST00000377142 NEFMP07197 916 aa22.74■■□□□ 1.23
NKX2-2-201ENST00000377142 IL13P35225 146 aa22.73■■□□□ 1.23
NKX2-2-201ENST00000377142 IL16Q14005 1332 aa22.73■■□□□ 1.23
NKX2-2-201ENST00000377142 RBM19Q9Y4C8 960 aaKnown RBP22.73■■□□□ 1.23
NKX2-2-201ENST00000377142 USP31Q70CQ4 1352 aa22.73■■□□□ 1.23
NKX2-2-201ENST00000377142 TRIM35Q9UPQ4 493 aa22.72■■□□□ 1.23
NKX2-2-201ENST00000377142 BCAR3O75815 825 aa22.72■■□□□ 1.23
NKX2-2-201ENST00000377142 PRKAR2BP31323 418 aa22.71■■□□□ 1.23
NKX2-2-201ENST00000377142 RRS1Q15050 365 aaKnown RBP22.71■■□□□ 1.23
NKX2-2-201ENST00000377142 NPHP4O75161 1426 aaPredicted RBP22.71■■□□□ 1.23
NKX2-2-201ENST00000377142 RIPK4P57078 832 aa22.7■■□□□ 1.22
NKX2-2-201ENST00000377142 NGDNQ8NEJ9 315 aaKnown RBP22.7■■□□□ 1.22
NKX2-2-201ENST00000377142 PIK3C2AO00443 1686 aa22.69■■□□□ 1.22
NKX2-2-201ENST00000377142 USP54Q70EL1 1684 aa22.69■■□□□ 1.22
NKX2-2-201ENST00000377142 CT47B1P0C2W7 299 aaPredicted RBP22.69■■□□□ 1.22
NKX2-2-201ENST00000377142 PMFBP1Q8TBY8 1022 aa22.69■■□□□ 1.22
NKX2-2-201ENST00000377142 PEAK1Q9H792 1746 aa22.68■■□□□ 1.22
NKX2-2-201ENST00000377142 FANCIQ9NVI1 1328 aa22.68■■□□□ 1.22
NKX2-2-201ENST00000377142 RARSP54136 660 aaKnown RBP22.67■■□□□ 1.22
NKX2-2-201ENST00000377142 PDE3AQ14432 1141 aa22.67■■□□□ 1.22
NKX2-2-201ENST00000377142 NWD1Q149M9 1564 aa22.66■■□□□ 1.22
NKX2-2-201ENST00000377142 HMOX1P09601 288 aa22.66■■□□□ 1.22
NKX2-2-201ENST00000377142 ADGRL3Q9HAR2 1447 aa22.65■■□□□ 1.22
NKX2-2-201ENST00000377142 NFE2L2Q16236 605 aa22.65■■□□□ 1.22
NKX2-2-201ENST00000377142 CANXP27824 592 aaKnown RBP22.64■■□□□ 1.22
NKX2-2-201ENST00000377142 RGPD1P0DJD0 1748 aa22.64■■□□□ 1.21
NKX2-2-201ENST00000377142 DLG5Q8TDM6 1919 aa22.62■■□□□ 1.21
NKX2-2-201ENST00000377142 MARF1Q9Y4F3 1742 aaKnown RBP22.62■■□□□ 1.21
NKX2-2-201ENST00000377142 CALD1Q05682 793 aaKnown RBP22.61■■□□□ 1.21
NKX2-2-201ENST00000377142 EIF4A2Q14240 407 aaKnown RBP22.61■■□□□ 1.21
NKX2-2-201ENST00000377142 TSR2Q969E8 191 aaKnown RBP22.61■■□□□ 1.21
NKX2-2-201ENST00000377142 PHACTR3Q96KR7 559 aa22.6■■□□□ 1.21
NKX2-2-201ENST00000377142 SBNO1A3KN83 1393 aa22.59■■□□□ 1.21
NKX2-2-201ENST00000377142 LMOD3Q0VAK6 560 aa22.59■■□□□ 1.21
NKX2-2-201ENST00000377142 KDM2BQ8NHM5 1336 aa22.59■■□□□ 1.21
NKX2-2-201ENST00000377142 FLT4P35916 1363 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms