RNA–Protein interactions for RNA: ENST00000377139.7

IRF3-203, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-203ENST00000377139 SSH2Q76I76 1423 aa24.3■■□□□ 1.48
IRF3-203ENST00000377139 TTC21BQ7Z4L5 1316 aa24.3■■□□□ 1.48
IRF3-203ENST00000377139 TTC21AQ8NDW8 1320 aa24.3■■□□□ 1.48
IRF3-203ENST00000377139 WDR43Q15061 677 aaKnown RBP eCLIP24.3■■□□□ 1.48
IRF3-203ENST00000377139 CFAP53Q96M91 514 aa24.29■■□□□ 1.48
IRF3-203ENST00000377139 NME9Q86XW9 330 aa24.28■■□□□ 1.48
IRF3-203ENST00000377139 MTHFSP49914 203 aa24.28■■□□□ 1.48
IRF3-203ENST00000377139 COG3Q96JB2 828 aa24.28■■□□□ 1.48
IRF3-203ENST00000377139 PHF8Q9UPP1 1060 aa24.28■■□□□ 1.48
IRF3-203ENST00000377139 ZBED9Q6R2W3 1325 aa24.27■■□□□ 1.48
IRF3-203ENST00000377139 BLMP54132 1417 aaPredicted RBP24.26■■□□□ 1.47
IRF3-203ENST00000377139 KIF1AQ12756 1690 aa24.24■■□□□ 1.47
IRF3-203ENST00000377139 AATKQ6ZMQ8 1374 aa24.24■■□□□ 1.47
IRF3-203ENST00000377139 OVOS2A0A0J9YW53 1432 aa24.23■■□□□ 1.47
IRF3-203ENST00000377139 OVOS2Q6IE36 1432 aa24.23■■□□□ 1.47
IRF3-203ENST00000377139 SHPRHQ149N8 1683 aa24.23■■□□□ 1.47
IRF3-203ENST00000377139 ATF3P18847 181 aa24.23■■□□□ 1.47
IRF3-203ENST00000377139 XIRP1Q702N8 1843 aaKnown RBP24.23■■□□□ 1.47
IRF3-203ENST00000377139 MSH6P52701 1360 aa24.23■■□□□ 1.47
IRF3-203ENST00000377139 ESCO1Q5FWF5 840 aa24.22■■□□□ 1.47
IRF3-203ENST00000377139 C1orf167Q5SNV9 1468 aa24.22■■□□□ 1.47
IRF3-203ENST00000377139 LRRC7Q96NW7 1537 aa24.22■■□□□ 1.47
IRF3-203ENST00000377139 ADAMTS8Q9UP79 889 aa24.21■■□□□ 1.47
IRF3-203ENST00000377139 CADPS2Q86UW7 1296 aa24.21■■□□□ 1.47
IRF3-203ENST00000377139 MAP2P11137 1827 aaKnown RBP24.2■■□□□ 1.46
IRF3-203ENST00000377139 USP31Q70CQ4 1352 aa24.2■■□□□ 1.46
IRF3-203ENST00000377139 ZNF335Q9H4Z2 1342 aaPredicted RBP24.2■■□□□ 1.46
IRF3-203ENST00000377139 PIK3C2AO00443 1686 aa24.19■■□□□ 1.46
IRF3-203ENST00000377139 USP54Q70EL1 1684 aa24.19■■□□□ 1.46
IRF3-203ENST00000377139 MST1RQ04912 1400 aa24.19■■□□□ 1.46
IRF3-203ENST00000377139 SMG6Q86US8 1419 aaKnown RBP24.19■■□□□ 1.46
IRF3-203ENST00000377139 ZRANB1Q9UGI0 708 aa24.18■■□□□ 1.46
IRF3-203ENST00000377139 COL3A1P02461 1466 aaPredicted RBP24.17■■□□□ 1.46
IRF3-203ENST00000377139 PNPLA6Q8IY17 1366 aa24.17■■□□□ 1.46
IRF3-203ENST00000377139 CDK12Q9NYV4 1490 aaPredicted RBP24.15■■□□□ 1.46
IRF3-203ENST00000377139 ORAI2Q96SN7 254 aa24.15■■□□□ 1.46
IRF3-203ENST00000377139 POLKQ9UBT6 870 aa24.15■■□□□ 1.46
IRF3-203ENST00000377139 PSME1Q06323 249 aa24.14■■□□□ 1.46
IRF3-203ENST00000377139 NUDCQ9Y266 331 aa24.13■■□□□ 1.45
IRF3-203ENST00000377139 PAK3O75914 559 aaPredicted RBP24.1■■□□□ 1.45
IRF3-203ENST00000377139 MARF1Q9Y4F3 1742 aaKnown RBP24.1■■□□□ 1.45
IRF3-203ENST00000377139 DIAPH1O60610 1272 aaKnown RBP24.1■■□□□ 1.45
IRF3-203ENST00000377139 ABTB2Q8N961 1025 aa24.1■■□□□ 1.45
IRF3-203ENST00000377139 NLRP6P59044 892 aa24.09■■□□□ 1.45
IRF3-203ENST00000377139 FOXO3O43524 673 aa24.08■■□□□ 1.45
IRF3-203ENST00000377139 EMILIN1Q9Y6C2 1016 aa24.08■■□□□ 1.45
IRF3-203ENST00000377139 TRPM3Q9HCF6 1732 aaPredicted RBP24.08■■□□□ 1.45
IRF3-203ENST00000377139 PPM1GO15355 546 aaPredicted RBP24.07■■□□□ 1.44
IRF3-203ENST00000377139 FBLN1P23142 703 aa24.06■■□□□ 1.44
IRF3-203ENST00000377139 RRS1Q15050 365 aaKnown RBP24.06■■□□□ 1.44
IRF3-203ENST00000377139 NGEFQ8N5V2 710 aa24.06■■□□□ 1.44
IRF3-203ENST00000377139 U2AF1L5P0DN76 240 aaPredicted RBP24.04■■□□□ 1.44
IRF3-203ENST00000377139 U2AF1Q01081 240 aaKnown RBP eCLIP24.04■■□□□ 1.44
IRF3-203ENST00000377139 KRT28Q7Z3Y7 464 aa24.04■■□□□ 1.44
IRF3-203ENST00000377139 PDE3BQ13370 1112 aa24.03■■□□□ 1.44
IRF3-203ENST00000377139 RUNDC1Q96C34 613 aa24.03■■□□□ 1.44
IRF3-203ENST00000377139 NPHP3Q7Z494 1330 aa24.03■■□□□ 1.44
IRF3-203ENST00000377139 CCDC146Q8IYE0 955 aa24.02■■□□□ 1.44
IRF3-203ENST00000377139 KIF24Q5T7B8 1368 aa24.02■■□□□ 1.44
IRF3-203ENST00000377139 U2SURPO15042 1029 aaKnown RBP24.02■■□□□ 1.44
IRF3-203ENST00000377139 PNNQ9H307 717 aaKnown RBP24.02■■□□□ 1.44
IRF3-203ENST00000377139 PEAK1Q9H792 1746 aa24■■□□□ 1.43
IRF3-203ENST00000377139 SBNO1A3KN83 1393 aa24■■□□□ 1.43
IRF3-203ENST00000377139 ALS2Q96Q42 1657 aa24■■□□□ 1.43
IRF3-203ENST00000377139 FLT4P35916 1363 aa23.99■■□□□ 1.43
IRF3-203ENST00000377139 MAP3K19Q56UN5 1328 aa23.99■■□□□ 1.43
IRF3-203ENST00000377139 SENP3-EIF4A1A0A087X0R7 540 aa23.99■■□□□ 1.43
IRF3-203ENST00000377139 NUTM2GQ5VZR2 741 aa23.99■■□□□ 1.43
IRF3-203ENST00000377139 KCNH5Q8NCM2 988 aa23.99■■□□□ 1.43
IRF3-203ENST00000377139 SALL2Q9Y467 1007 aaPredicted RBP23.99■■□□□ 1.43
IRF3-203ENST00000377139 IQSEC2Q5JU85 1478 aa23.98■■□□□ 1.43
IRF3-203ENST00000377139 APAF1O14727 1248 aa23.98■■□□□ 1.43
IRF3-203ENST00000377139 IL13P35225 146 aa23.98■■□□□ 1.43
IRF3-203ENST00000377139 XPCQ01831 940 aaPredicted RBP23.98■■□□□ 1.43
IRF3-203ENST00000377139 SLAIN2Q9P270 581 aa23.98■■□□□ 1.43
IRF3-203ENST00000377139 SOX12O15370 315 aa23.97■■□□□ 1.43
IRF3-203ENST00000377139 SLIT3O75094 1523 aa23.97■■□□□ 1.43
IRF3-203ENST00000377139 LTBP4Q8N2S1 1624 aa23.97■■□□□ 1.43
IRF3-203ENST00000377139 BRINP3Q76B58 766 aa23.96■■□□□ 1.43
IRF3-203ENST00000377139 NFAT5O94916 1531 aa23.96■■□□□ 1.43
IRF3-203ENST00000377139 NCBP3Q53F19 620 aaKnown RBP23.95■■□□□ 1.43
IRF3-203ENST00000377139 RTL1A6NKG5 1358 aa23.95■■□□□ 1.42
IRF3-203ENST00000377139 PXDNQ92626 1479 aa23.95■■□□□ 1.42
IRF3-203ENST00000377139 FCHSD2O94868 740 aa23.95■■□□□ 1.42
IRF3-203ENST00000377139 LTN1O94822 1766 aa23.94■■□□□ 1.42
IRF3-203ENST00000377139 AMPHP49418 695 aa23.94■■□□□ 1.42
IRF3-203ENST00000377139 USP19O94966 1318 aa23.93■■□□□ 1.42
IRF3-203ENST00000377139 PHRF1Q9P1Y6 1649 aaKnown RBP23.93■■□□□ 1.42
IRF3-203ENST00000377139 ZNF521Q96K83 1311 aa23.93■■□□□ 1.42
IRF3-203ENST00000377139 TNS3Q68CZ2 1445 aa23.93■■□□□ 1.42
IRF3-203ENST00000377139 TCP11L2Q8N4U5 519 aa23.92■■□□□ 1.42
IRF3-203ENST00000377139 PLEKHF1Q96S99 279 aa23.92■■□□□ 1.42
IRF3-203ENST00000377139 MAPK8IP3Q9UPT6 1336 aa23.92■■□□□ 1.42
IRF3-203ENST00000377139 EIF4A2Q14240 407 aaKnown RBP23.92■■□□□ 1.42
IRF3-203ENST00000377139 LMOD2Q6P5Q4 547 aa23.92■■□□□ 1.42
IRF3-203ENST00000377139 NEFMP07197 916 aa23.91■■□□□ 1.42
IRF3-203ENST00000377139 RGPD1P0DJD0 1748 aa23.9■■□□□ 1.42
IRF3-203ENST00000377139 HSP90AB2PQ58FF8 381 aa23.9■■□□□ 1.42
IRF3-203ENST00000377139 RSPH6AQ9H0K4 717 aa23.9■■□□□ 1.42
IRF3-203ENST00000377139 ARHGEF10O15013 1369 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms