RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 KIAA1210Q9ULL0 1709 aa25.47■■□□□ 1.67
HLA-A-201ENST00000376802 ZRANB1Q9UGI0 708 aa25.46■■□□□ 1.67
HLA-A-201ENST00000376802 CCDC9Q9Y3X0 531 aaKnown RBP25.46■■□□□ 1.67
HLA-A-201ENST00000376802 NUDT16Q96DE0 195 aaKnown RBP25.45■■□□□ 1.66
HLA-A-201ENST00000376802 BTG4Q9NY30 223 aa25.45■■□□□ 1.66
HLA-A-201ENST00000376802 PAK3O75914 559 aaPredicted RBP25.42■■□□□ 1.66
HLA-A-201ENST00000376802 KRT27Q7Z3Y8 459 aa25.42■■□□□ 1.66
HLA-A-201ENST00000376802 CDK19Q9BWU1 502 aa25.42■■□□□ 1.66
HLA-A-201ENST00000376802 TOPAZ1Q8N9V7 1692 aa25.42■■□□□ 1.66
HLA-A-201ENST00000376802 DEFB132Q7Z7B7 95 aa25.4■■□□□ 1.66
HLA-A-201ENST00000376802 FAM98CQ17RN3 349 aaKnown RBP25.39■■□□□ 1.66
HLA-A-201ENST00000376802 NBPF1Q3BBV0 1214 aa25.39■■□□□ 1.66
HLA-A-201ENST00000376802 POLR3AO14802 1390 aaPredicted RBP25.39■■□□□ 1.65
HLA-A-201ENST00000376802 PHRF1Q9P1Y6 1649 aaKnown RBP25.38■■□□□ 1.65
HLA-A-201ENST00000376802 SPATA31A5Q5VU36 1347 aa25.36■■□□□ 1.65
HLA-A-201ENST00000376802 SPATA31A7Q8IWB4 1347 aa25.36■■□□□ 1.65
HLA-A-201ENST00000376802 NBPF8Q3BBV2 869 aa25.35■■□□□ 1.65
HLA-A-201ENST00000376802 PRDM11Q9NQV5 511 aa25.35■■□□□ 1.65
HLA-A-201ENST00000376802 CCDC61Q9Y6R9 512 aa25.35■■□□□ 1.65
HLA-A-201ENST00000376802 ACEP12821 1306 aa25.34■■□□□ 1.65
HLA-A-201ENST00000376802 PLEKHG3A1L390 1219 aa25.34■■□□□ 1.65
HLA-A-201ENST00000376802 KIAA0232Q92628 1395 aa25.33■■□□□ 1.65
HLA-A-201ENST00000376802 THSD7AQ9UPZ6 1657 aa25.33■■□□□ 1.65
HLA-A-201ENST00000376802 A0A0G2JS52 829 aa25.33■■□□□ 1.64
HLA-A-201ENST00000376802 MYT1Q01538 1121 aa25.33■■□□□ 1.64
HLA-A-201ENST00000376802 SF3B2Q13435 895 aaKnown RBP25.33■■□□□ 1.64
HLA-A-201ENST00000376802 NUTM2GQ5VZR2 741 aa25.32■■□□□ 1.64
HLA-A-201ENST00000376802 CHRNA2Q15822 529 aa25.3■■□□□ 1.64
HLA-A-201ENST00000376802 ZC3H6P61129 1189 aaKnown RBP25.28■■□□□ 1.64
HLA-A-201ENST00000376802 FAM182BQ5T319 152 aa25.28■■□□□ 1.64
HLA-A-201ENST00000376802 SPATA31A1Q5TZJ5 1347 aa25.28■■□□□ 1.64
HLA-A-201ENST00000376802 NRKQ7Z2Y5 1582 aa25.26■■□□□ 1.63
HLA-A-201ENST00000376802 CENPJQ9HC77 1338 aaPredicted RBP25.26■■□□□ 1.63
HLA-A-201ENST00000376802 QRICH2Q9H0J4 1663 aa25.26■■□□□ 1.63
HLA-A-201ENST00000376802 RGPD1P0DJD0 1748 aa25.25■■□□□ 1.63
HLA-A-201ENST00000376802 ABTB2Q8N961 1025 aa25.24■■□□□ 1.63
HLA-A-201ENST00000376802 PPIP5K1Q6PFW1 1433 aa25.24■■□□□ 1.63
HLA-A-201ENST00000376802 SRPK2P78362 688 aaKnown RBP25.23■■□□□ 1.63
HLA-A-201ENST00000376802 L3MBTL2Q969R5 705 aa25.23■■□□□ 1.63
HLA-A-201ENST00000376802 CABP2Q9NPB3 220 aa25.23■■□□□ 1.63
HLA-A-201ENST00000376802 STRN4Q9NRL3 753 aa25.23■■□□□ 1.63
HLA-A-201ENST00000376802 LMO7Q8WWI1 1683 aa25.23■■□□□ 1.63
HLA-A-201ENST00000376802 CAMTA1Q9Y6Y1 1673 aa25.23■■□□□ 1.63
HLA-A-201ENST00000376802 USP19O94966 1318 aa25.22■■□□□ 1.63
HLA-A-201ENST00000376802 BAG6P46379 1132 aa25.22■■□□□ 1.63
HLA-A-201ENST00000376802 TNS1Q9HBL0 1735 aaKnown RBP25.21■■□□□ 1.63
HLA-A-201ENST00000376802 CPDO75976 1380 aa25.21■■□□□ 1.63
HLA-A-201ENST00000376802 SSH2Q76I76 1423 aa25.19■■□□□ 1.62
HLA-A-201ENST00000376802 TRPM1Q7Z4N2 1603 aa25.19■■□□□ 1.62
HLA-A-201ENST00000376802 EN1Q05925 392 aaPredicted RBP25.18■■□□□ 1.62
HLA-A-201ENST00000376802 SIN3AQ96ST3 1273 aa25.17■■□□□ 1.62
HLA-A-201ENST00000376802 GCP02774 474 aa25.16■■□□□ 1.62
HLA-A-201ENST00000376802 NLRP13Q86W25 1043 aa25.16■■□□□ 1.62
HLA-A-201ENST00000376802 CABP1Q9NZU7 370 aa25.16■■□□□ 1.62
HLA-A-201ENST00000376802 DISP2A7MBM2 1401 aa25.16■■□□□ 1.62
HLA-A-201ENST00000376802 EVA1CP58658 441 aa25.15■■□□□ 1.62
HLA-A-201ENST00000376802 LARP1Q6PKG0 1096 aaKnown RBP25.15■■□□□ 1.62
HLA-A-201ENST00000376802 BARGINQ6ZT62 677 aa25.15■■□□□ 1.62
HLA-A-201ENST00000376802 USP35Q9P2H5 1018 aa25.15■■□□□ 1.62
HLA-A-201ENST00000376802 LRP5O75197 1615 aa25.15■■□□□ 1.62
HLA-A-201ENST00000376802 BRD4O60885 1362 aaPredicted RBP25.14■■□□□ 1.62
HLA-A-201ENST00000376802 USP6P35125 1406 aa25.14■■□□□ 1.62
HLA-A-201ENST00000376802 PSDA5PKW4 1024 aaPredicted RBP25.13■■□□□ 1.61
HLA-A-201ENST00000376802 FAM196AQ6ZSG2 479 aa25.12■■□□□ 1.61
HLA-A-201ENST00000376802 TRIM37O94972 964 aa25.11■■□□□ 1.61
HLA-A-201ENST00000376802 TCP11L2Q8N4U5 519 aa25.1■■□□□ 1.61
HLA-A-201ENST00000376802 COL5A2P05997 1499 aaPredicted RBP25.1■■□□□ 1.61
HLA-A-201ENST00000376802 PIK3C2AO00443 1686 aa25.09■■□□□ 1.61
HLA-A-201ENST00000376802 SLIT3O75094 1523 aa25.09■■□□□ 1.61
HLA-A-201ENST00000376802 EZH2Q15910 746 aaKnown RBP25.09■■□□□ 1.61
HLA-A-201ENST00000376802 CAMKK2Q96RR4 588 aa25.09■■□□□ 1.61
HLA-A-201ENST00000376802 EVC2Q86UK5 1308 aa25.08■■□□□ 1.61
HLA-A-201ENST00000376802 COL18A1P39060 1754 aa25.08■■□□□ 1.6
HLA-A-201ENST00000376802 NLRP6P59044 892 aa25.08■■□□□ 1.6
HLA-A-201ENST00000376802 NEUROD1Q13562 356 aa25.08■■□□□ 1.6
HLA-A-201ENST00000376802 THRAP3Q9Y2W1 955 aaKnown RBP25.07■■□□□ 1.6
HLA-A-201ENST00000376802 PARP4Q9UKK3 1724 aaKnown RBP25.06■■□□□ 1.6
HLA-A-201ENST00000376802 AKAP12Q02952 1782 aa25.06■■□□□ 1.6
HLA-A-201ENST00000376802 PDE3BQ13370 1112 aa25.06■■□□□ 1.6
HLA-A-201ENST00000376802 ROCK2O75116 1388 aaKnown RBP25.06■■□□□ 1.6
HLA-A-201ENST00000376802 AATKQ6ZMQ8 1374 aa25.05■■□□□ 1.6
HLA-A-201ENST00000376802 APBA3O96018 575 aa25.03■■□□□ 1.6
HLA-A-201ENST00000376802 CRB1P82279 1406 aa25.03■■□□□ 1.6
HLA-A-201ENST00000376802 R3HDM1Q15032 1099 aaKnown RBP25.03■■□□□ 1.6
HLA-A-201ENST00000376802 RREB1Q92766 1687 aa25.01■■□□□ 1.59
HLA-A-201ENST00000376802 RGPD5Q99666 1765 aa25■■□□□ 1.59
HLA-A-201ENST00000376802 ZBTB7CA1YPR0 619 aa25■■□□□ 1.59
HLA-A-201ENST00000376802 AXIN2Q9Y2T1 843 aa25■■□□□ 1.59
HLA-A-201ENST00000376802 CPSF1Q10570 1443 aaKnown RBP24.99■■□□□ 1.59
HLA-A-201ENST00000376802 PEAK1Q9H792 1746 aa24.99■■□□□ 1.59
HLA-A-201ENST00000376802 PARD3Q8TEW0 1356 aa24.99■■□□□ 1.59
HLA-A-201ENST00000376802 TTC21BQ7Z4L5 1316 aa24.99■■□□□ 1.59
HLA-A-201ENST00000376802 ZNF692Q9BU19 519 aaPredicted RBP24.99■■□□□ 1.59
HLA-A-201ENST00000376802 NUP188Q5SRE5 1749 aa24.98■■□□□ 1.59
HLA-A-201ENST00000376802 SBF2Q86WG5 1849 aa24.97■■□□□ 1.59
HLA-A-201ENST00000376802 WNK3Q9BYP7 1800 aa24.96■■□□□ 1.59
HLA-A-201ENST00000376802 ARHGEF25Q86VW2 580 aa24.96■■□□□ 1.59
HLA-A-201ENST00000376802 LRRC37A3O60309 1634 aa24.96■■□□□ 1.59
HLA-A-201ENST00000376802 MON2Q7Z3U7 1717 aa24.94■■□□□ 1.58
HLA-A-201ENST00000376802 TTC21AQ8NDW8 1320 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms