RNA–Protein interactions for RNA: ENST00000376177.6

DDX39B-201, Transcript of DExD-box helicase 39B, humanhuman

TSL 5 BASIC

Gene DDX39B, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-201ENST00000376177 UTRNP46939 3433 aa16.46■□□□□ 0.23
DDX39B-201ENST00000376177 SLC4A1APQ9BWU0 796 aaKnown RBP16.45■□□□□ 0.22
DDX39B-201ENST00000376177 PHRF1Q9P1Y6 1649 aaKnown RBP16.43■□□□□ 0.22
DDX39B-201ENST00000376177 SPATA31A1Q5TZJ5 1347 aa16.42■□□□□ 0.22
DDX39B-201ENST00000376177 CHRNA2Q15822 529 aa16.41■□□□□ 0.22
DDX39B-201ENST00000376177 FAM196AQ6ZSG2 479 aa16.41■□□□□ 0.22
DDX39B-201ENST00000376177 PRAM1Q96QH2 718 aa16.41■□□□□ 0.22
DDX39B-201ENST00000376177 PPP1R1BQ9UD71 204 aaPredicted RBP16.41■□□□□ 0.22
DDX39B-201ENST00000376177 CASZ1Q86V15 1759 aa16.4■□□□□ 0.22
DDX39B-201ENST00000376177 NRKQ7Z2Y5 1582 aa16.4■□□□□ 0.22
DDX39B-201ENST00000376177 PARD3Q8TEW0 1356 aa16.4■□□□□ 0.22
DDX39B-201ENST00000376177 ANKRD30BQ9BXX2 1392 aa16.4■□□□□ 0.22
DDX39B-201ENST00000376177 PRR36Q9H6K5 1346 aa16.4■□□□□ 0.22
DDX39B-201ENST00000376177 STRN4Q9NRL3 753 aa16.4■□□□□ 0.22
DDX39B-201ENST00000376177 MYOM1P52179 1685 aa16.39■□□□□ 0.21
DDX39B-201ENST00000376177 CFAP70Q5T0N1 1121 aa16.39■□□□□ 0.21
DDX39B-201ENST00000376177 SIRT1Q96EB6 747 aa16.39■□□□□ 0.21
DDX39B-201ENST00000376177 PRDM11Q9NQV5 511 aa16.39■□□□□ 0.21
DDX39B-201ENST00000376177 USP35Q9P2H5 1018 aa16.39■□□□□ 0.21
DDX39B-201ENST00000376177 ANKARQ7Z5J8 1434 aa16.38■□□□□ 0.21
DDX39B-201ENST00000376177 KIAA0232Q92628 1395 aa16.38■□□□□ 0.21
DDX39B-201ENST00000376177 ACIN1Q9UKV3 1341 aaKnown RBP16.38■□□□□ 0.21
DDX39B-201ENST00000376177 KCNQ2O43526 872 aa16.38■□□□□ 0.21
DDX39B-201ENST00000376177 HIRIP3Q9BW71 556 aaPredicted RBP16.38■□□□□ 0.21
DDX39B-201ENST00000376177 PCGF6Q9BYE7 350 aa16.38■□□□□ 0.21
DDX39B-201ENST00000376177 SPON1Q9HCB6 807 aa16.38■□□□□ 0.21
DDX39B-201ENST00000376177 NINLQ9Y2I6 1382 aa16.37■□□□□ 0.21
DDX39B-201ENST00000376177 PDGFDQ9GZP0 370 aaPredicted RBP16.37■□□□□ 0.21
DDX39B-201ENST00000376177 SBF2Q86WG5 1849 aa16.37■□□□□ 0.21
DDX39B-201ENST00000376177 ZNF784Q8NCA9 323 aaPredicted RBP16.36■□□□□ 0.21
DDX39B-201ENST00000376177 C14orf93Q9H972 538 aaKnown RBP16.36■□□□□ 0.21
DDX39B-201ENST00000376177 NBPF8Q3BBV2 869 aa16.35■□□□□ 0.21
DDX39B-201ENST00000376177 NBPF14Q5TI25 921 aa16.35■□□□□ 0.21
DDX39B-201ENST00000376177 PAK3O75914 559 aaPredicted RBP16.35■□□□□ 0.21
DDX39B-201ENST00000376177 GPRASP1Q5JY77 1395 aa16.33■□□□□ 0.21
DDX39B-201ENST00000376177 DHX57Q6P158 1386 aaKnown RBP16.33■□□□□ 0.21
DDX39B-201ENST00000376177 PEAK1Q9H792 1746 aa16.33■□□□□ 0.21
DDX39B-201ENST00000376177 CHD4Q14839 1912 aa16.33■□□□□ 0.2
DDX39B-201ENST00000376177 DLC1Q96QB1 1528 aa16.33■□□□□ 0.2
DDX39B-201ENST00000376177 SENP3-EIF4A1A0A087X0R7 540 aa16.33■□□□□ 0.2
DDX39B-201ENST00000376177 ZC3H6P61129 1189 aaKnown RBP16.33■□□□□ 0.2
DDX39B-201ENST00000376177 ANO8Q9HCE9 1232 aaPredicted RBP16.33■□□□□ 0.2
DDX39B-201ENST00000376177 PARP4Q9UKK3 1724 aaKnown RBP16.33■□□□□ 0.2
DDX39B-201ENST00000376177 TULP4Q9NRJ4 1543 aa16.32■□□□□ 0.2
DDX39B-201ENST00000376177 TRIM26Q12899 539 aaPredicted RBP16.32■□□□□ 0.2
DDX39B-201ENST00000376177 NUTM2GQ5VZR2 741 aa16.32■□□□□ 0.2
DDX39B-201ENST00000376177 MINK1Q8N4C8 1332 aaPredicted RBP16.32■□□□□ 0.2
DDX39B-201ENST00000376177 SSH2Q76I76 1423 aa16.32■□□□□ 0.2
DDX39B-201ENST00000376177 PDE3BQ13370 1112 aa16.31■□□□□ 0.2
DDX39B-201ENST00000376177 POGKQ9P215 609 aa16.31■□□□□ 0.2
DDX39B-201ENST00000376177 LMO7Q8WWI1 1683 aa16.31■□□□□ 0.2
DDX39B-201ENST00000376177 RGPD3A6NKT7 1758 aaPredicted RBP16.31■□□□□ 0.2
DDX39B-201ENST00000376177 RGPD4Q7Z3J3 1758 aa16.31■□□□□ 0.2
DDX39B-201ENST00000376177 CEP350Q5VT06 3117 aa16.31■□□□□ 0.2
DDX39B-201ENST00000376177 ADGRB1O14514 1584 aa16.3■□□□□ 0.2
DDX39B-201ENST00000376177 DCAF8L1A6NGE4 600 aa16.3■□□□□ 0.2
DDX39B-201ENST00000376177 LARP1Q6PKG0 1096 aaKnown RBP16.3■□□□□ 0.2
DDX39B-201ENST00000376177 PTF1AQ7RTS3 328 aa16.3■□□□□ 0.2
DDX39B-201ENST00000376177 ITSN1Q15811 1721 aa16.29■□□□□ 0.2
DDX39B-201ENST00000376177 ZEB1P37275 1124 aaPredicted RBP16.29■□□□□ 0.2
DDX39B-201ENST00000376177 BARGINQ6ZT62 677 aa16.29■□□□□ 0.2
DDX39B-201ENST00000376177 ZBTB7AO95365 584 aa16.28■□□□□ 0.2
DDX39B-201ENST00000376177 NGDNQ8NEJ9 315 aaKnown RBP16.28■□□□□ 0.2
DDX39B-201ENST00000376177 TRAK1Q9UPV9 953 aa16.28■□□□□ 0.2
DDX39B-201ENST00000376177 IFFO2Q5TF58 517 aa16.27■□□□□ 0.2
DDX39B-201ENST00000376177 LRRC37A3O60309 1634 aa16.27■□□□□ 0.19
DDX39B-201ENST00000376177 PTGER2P43116 358 aa16.25■□□□□ 0.19
DDX39B-201ENST00000376177 EVA1CP58658 441 aa16.25■□□□□ 0.19
DDX39B-201ENST00000376177 C1QTNF8P60827 252 aa16.25■□□□□ 0.19
DDX39B-201ENST00000376177 ATF5Q9Y2D1 282 aaPredicted RBP16.25■□□□□ 0.19
DDX39B-201ENST00000376177 ATP7BP35670 1465 aa16.25■□□□□ 0.19
DDX39B-201ENST00000376177 WASLO00401 505 aaPredicted RBP16.24■□□□□ 0.19
DDX39B-201ENST00000376177 MPHOSPH9Q99550 1183 aa16.24■□□□□ 0.19
DDX39B-201ENST00000376177 WNK3Q9BYP7 1800 aa16.24■□□□□ 0.19
DDX39B-201ENST00000376177 TCP11L2Q8N4U5 519 aa16.24■□□□□ 0.19
DDX39B-201ENST00000376177 TOPAZ1Q8N9V7 1692 aa16.23■□□□□ 0.19
DDX39B-201ENST00000376177 ARHGEF28Q8N1W1 1705 aaKnown RBP16.23■□□□□ 0.19
DDX39B-201ENST00000376177 GOLGB1Q14789 3259 aaKnown RBP16.23■□□□□ 0.19
DDX39B-201ENST00000376177 PROM2Q8N271 834 aa16.23■□□□□ 0.19
DDX39B-201ENST00000376177 FHDC1Q9C0D6 1143 aaPredicted RBP16.22■□□□□ 0.19
DDX39B-201ENST00000376177 AKAP12Q02952 1782 aa16.21■□□□□ 0.19
DDX39B-201ENST00000376177 OVOS2A0A0G2JMS6 1433 aa16.2■□□□□ 0.18
DDX39B-201ENST00000376177 OVOS2A0A0J9YW53 1432 aa16.2■□□□□ 0.18
DDX39B-201ENST00000376177 COL5A2P05997 1499 aaPredicted RBP16.2■□□□□ 0.18
DDX39B-201ENST00000376177 OVOS2Q6IE36 1432 aa16.2■□□□□ 0.18
DDX39B-201ENST00000376177 SYT17Q9BSW7 474 aa16.2■□□□□ 0.18
DDX39B-201ENST00000376177 EIF3AQ14152 1382 aaKnown RBP16.2■□□□□ 0.18
DDX39B-201ENST00000376177 PLSCR1O15162 318 aa16.19■□□□□ 0.18
DDX39B-201ENST00000376177 NUDT16Q96DE0 195 aaKnown RBP16.19■□□□□ 0.18
DDX39B-201ENST00000376177 BCL11BQ9C0K0 894 aaPredicted RBP16.18■□□□□ 0.18
DDX39B-201ENST00000376177 RGPD5Q99666 1765 aa16.17■□□□□ 0.18
DDX39B-201ENST00000376177 CPDO75976 1380 aa16.16■□□□□ 0.18
DDX39B-201ENST00000376177 ACEP12821 1306 aa16.16■□□□□ 0.18
DDX39B-201ENST00000376177 SGIP1Q9BQI5 828 aa16.16■□□□□ 0.18
DDX39B-201ENST00000376177 THRAP3Q9Y2W1 955 aaKnown RBP16.15■□□□□ 0.18
DDX39B-201ENST00000376177 USP19O94966 1318 aa16.15■□□□□ 0.18
DDX39B-201ENST00000376177 CRB1P82279 1406 aa16.14■□□□□ 0.17
DDX39B-201ENST00000376177 COL18A1P39060 1754 aa16.14■□□□□ 0.17
DDX39B-201ENST00000376177 POLR3AO14802 1390 aaPredicted RBP16.14■□□□□ 0.17
DDX39B-201ENST00000376177 ABTB2Q8N961 1025 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms