RNA–Protein interactions for RNA: ENST00000375128.4

XPA-201, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XPA, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-201ENST00000375128 MYOM1P52179 1685 aa30.17■■■□□ 2.42
XPA-201ENST00000375128 A0A1W2PP64 1363 aa30.17■■■□□ 2.42
XPA-201ENST00000375128 MON2Q7Z3U7 1717 aa30.16■■■□□ 2.42
XPA-201ENST00000375128 PLEKHG5O94827 1062 aa30.15■■■□□ 2.42
XPA-201ENST00000375128 ARHGEF10O15013 1369 aa30.14■■■□□ 2.42
XPA-201ENST00000375128 BRD4O60885 1362 aaPredicted RBP30.14■■■□□ 2.42
XPA-201ENST00000375128 ANKRD36BQ8N2N9 1353 aa30.14■■■□□ 2.42
XPA-201ENST00000375128 ALS2Q96Q42 1657 aa30.13■■■□□ 2.41
XPA-201ENST00000375128 ABTB2Q8N961 1025 aa30.13■■■□□ 2.41
XPA-201ENST00000375128 NUTM2BA6NNL0 878 aaPredicted RBP30.12■■■□□ 2.41
XPA-201ENST00000375128 NUTM2EB1AL46 878 aaPredicted RBP30.12■■■□□ 2.41
XPA-201ENST00000375128 TTC21BQ7Z4L5 1316 aa30.12■■■□□ 2.41
XPA-201ENST00000375128 NUTM2AQ8IVF1 878 aaPredicted RBP30.12■■■□□ 2.41
XPA-201ENST00000375128 SSH2Q76I76 1423 aa30.11■■■□□ 2.41
XPA-201ENST00000375128 CCDC7Q96M83 1385 aa30.11■■■□□ 2.41
XPA-201ENST00000375128 SPATA31A6Q5VVP1 1343 aa30.11■■■□□ 2.41
XPA-201ENST00000375128 NUTM2GQ5VZR2 741 aa30.11■■■□□ 2.41
XPA-201ENST00000375128 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.11■■■□□ 2.41
XPA-201ENST00000375128 WASHC2AQ641Q2 1341 aa30.1■■■□□ 2.41
XPA-201ENST00000375128 COL22A1Q8NFW1 1626 aaPredicted RBP30.09■■■□□ 2.41
XPA-201ENST00000375128 NRKQ7Z2Y5 1582 aa30.08■■■□□ 2.41
XPA-201ENST00000375128 TTC21AQ8NDW8 1320 aa30.07■■■□□ 2.4
XPA-201ENST00000375128 EDC4Q6P2E9 1401 aaKnown RBP30.07■■■□□ 2.4
XPA-201ENST00000375128 CABLES1Q8TDN4 633 aa30.06■■■□□ 2.4
XPA-201ENST00000375128 HAP1P54257 671 aaPredicted RBP30.05■■■□□ 2.4
XPA-201ENST00000375128 NLRP6P59044 892 aa30.05■■■□□ 2.4
XPA-201ENST00000375128 PANK3Q9H999 370 aa30.05■■■□□ 2.4
XPA-201ENST00000375128 NLRP13Q86W25 1043 aa30.03■■■□□ 2.4
XPA-201ENST00000375128 CARD14Q9BXL6 1004 aa30.03■■■□□ 2.4
XPA-201ENST00000375128 PIK3C2AO00443 1686 aa30.02■■■□□ 2.4
XPA-201ENST00000375128 NME9Q86XW9 330 aa30.01■■■□□ 2.39
XPA-201ENST00000375128 ADAMTS2O95450 1211 aa30■■■□□ 2.39
XPA-201ENST00000375128 MEX3CQ5U5Q3 659 aaKnown RBP30■■■□□ 2.39
XPA-201ENST00000375128 LRP6O75581 1613 aa30■■■□□ 2.39
XPA-201ENST00000375128 NSD3Q9BZ95 1437 aa30■■■□□ 2.39
XPA-201ENST00000375128 MED1Q15648 1581 aaPredicted RBP29.99■■■□□ 2.39
XPA-201ENST00000375128 ZRANB1Q9UGI0 708 aa29.97■■■□□ 2.39
XPA-201ENST00000375128 ABCA3Q99758 1704 aa29.97■■■□□ 2.39
XPA-201ENST00000375128 CRYBG1Q9Y4K1 1723 aa29.94■■■□□ 2.38
XPA-201ENST00000375128 USP19O94966 1318 aa29.93■■■□□ 2.38
XPA-201ENST00000375128 PHRF1Q9P1Y6 1649 aaKnown RBP29.93■■■□□ 2.38
XPA-201ENST00000375128 FYB1O15117 783 aa29.92■■■□□ 2.38
XPA-201ENST00000375128 USP31Q70CQ4 1352 aa29.92■■■□□ 2.38
XPA-201ENST00000375128 GGNBP2Q9H3C7 697 aa29.91■■■□□ 2.38
XPA-201ENST00000375128 KIF20BQ96Q89 1820 aa29.91■■■□□ 2.38
XPA-201ENST00000375128 MARF1Q9Y4F3 1742 aaKnown RBP29.91■■■□□ 2.38
XPA-201ENST00000375128 SOX12O15370 315 aa29.9■■■□□ 2.38
XPA-201ENST00000375128 GCP02774 474 aa29.9■■■□□ 2.38
XPA-201ENST00000375128 COG3Q96JB2 828 aa29.9■■■□□ 2.38
XPA-201ENST00000375128 C8orf37Q96NL8 207 aa29.9■■■□□ 2.38
XPA-201ENST00000375128 KNSTRNQ9Y448 316 aa29.89■■■□□ 2.38
XPA-201ENST00000375128 CGNL1Q0VF96 1302 aa29.89■■■□□ 2.38
XPA-201ENST00000375128 ZC3H6P61129 1189 aaKnown RBP29.88■■■□□ 2.37
XPA-201ENST00000375128 SLIT3O75094 1523 aa29.87■■■□□ 2.37
XPA-201ENST00000375128 KCNH5Q8NCM2 988 aa29.87■■■□□ 2.37
XPA-201ENST00000375128 NGLY1Q96IV0 654 aa29.87■■■□□ 2.37
XPA-201ENST00000375128 PHF23Q9BUL5 403 aaPredicted RBP29.87■■■□□ 2.37
XPA-201ENST00000375128 USP54Q70EL1 1684 aa29.86■■■□□ 2.37
XPA-201ENST00000375128 OVOS2A0A0J9YW53 1432 aa29.85■■■□□ 2.37
XPA-201ENST00000375128 OVOS2Q6IE36 1432 aa29.85■■■□□ 2.37
XPA-201ENST00000375128 ZNF316A6NFI3 1004 aaPredicted RBP29.85■■■□□ 2.37
XPA-201ENST00000375128 ZBTB7CA1YPR0 619 aa29.84■■■□□ 2.37
XPA-201ENST00000375128 PRDM11Q9NQV5 511 aa29.83■■■□□ 2.37
XPA-201ENST00000375128 KIAA0232Q92628 1395 aa29.83■■■□□ 2.37
XPA-201ENST00000375128 FAM83GA6ND36 823 aa29.81■■■□□ 2.36
XPA-201ENST00000375128 PER1O15534 1290 aaPredicted RBP29.81■■■□□ 2.36
XPA-201ENST00000375128 DDX10Q13206 875 aaKnown RBP29.79■■■□□ 2.36
XPA-201ENST00000375128 AFF2P51816 1311 aa29.79■■■□□ 2.36
XPA-201ENST00000375128 CHRNA2Q15822 529 aa29.79■■■□□ 2.36
XPA-201ENST00000375128 CPDO75976 1380 aa29.76■■■□□ 2.35
XPA-201ENST00000375128 CNGB1Q14028 1251 aaPredicted RBP29.76■■■□□ 2.35
XPA-201ENST00000375128 NFAT5O94916 1531 aa29.76■■■□□ 2.35
XPA-201ENST00000375128 COL14A1Q05707 1796 aaKnown RBP29.76■■■□□ 2.35
XPA-201ENST00000375128 ANKRD26Q9UPS8 1709 aa29.75■■■□□ 2.35
XPA-201ENST00000375128 NSD2O96028 1365 aa29.75■■■□□ 2.35
XPA-201ENST00000375128 AMER1Q5JTC6 1135 aaPredicted RBP29.75■■■□□ 2.35
XPA-201ENST00000375128 FBLN1P23142 703 aa29.74■■■□□ 2.35
XPA-201ENST00000375128 FNBP4Q8N3X1 1017 aaPredicted RBP29.74■■■□□ 2.35
XPA-201ENST00000375128 USP21Q9UK80 565 aa29.74■■■□□ 2.35
XPA-201ENST00000375128 PLCH1Q4KWH8 1693 aa29.74■■■□□ 2.35
XPA-201ENST00000375128 CC2D1BQ5T0F9 858 aaKnown RBP29.73■■■□□ 2.35
XPA-201ENST00000375128 ARHGEF25Q86VW2 580 aa29.73■■■□□ 2.35
XPA-201ENST00000375128 BTG4Q9NY30 223 aa29.72■■■□□ 2.35
XPA-201ENST00000375128 LTN1O94822 1766 aa29.72■■■□□ 2.35
XPA-201ENST00000375128 ZNF772Q68DY9 489 aaPredicted RBP29.71■■■□□ 2.35
XPA-201ENST00000375128 MORC1Q86VD1 984 aa29.71■■■□□ 2.35
XPA-201ENST00000375128 SLIT2O94813 1529 aa29.71■■■□□ 2.35
XPA-201ENST00000375128 TNNT2P45379 298 aaPredicted RBP29.71■■■□□ 2.35
XPA-201ENST00000375128 RGS17Q9UGC6 210 aaPredicted RBP29.71■■■□□ 2.35
XPA-201ENST00000375128 NWD2Q9ULI1 1742 aa29.69■■■□□ 2.34
XPA-201ENST00000375128 RRS1Q15050 365 aaKnown RBP29.68■■■□□ 2.34
XPA-201ENST00000375128 UNC5CLQ8IV45 518 aa29.68■■■□□ 2.34
XPA-201ENST00000375128 AATKQ6ZMQ8 1374 aa29.68■■■□□ 2.34
XPA-201ENST00000375128 BCL9LQ86UU0 1499 aa29.67■■■□□ 2.34
XPA-201ENST00000375128 MAP3K19Q56UN5 1328 aa29.65■■■□□ 2.34
XPA-201ENST00000375128 EVA1CP58658 441 aa29.65■■■□□ 2.34
XPA-201ENST00000375128 COL18A1P39060 1754 aa29.65■■■□□ 2.34
XPA-201ENST00000375128 LMO7Q8WWI1 1683 aa29.65■■■□□ 2.34
XPA-201ENST00000375128 NPC1L1Q9UHC9 1359 aa29.64■■■□□ 2.34
XPA-201ENST00000375128 AMPHP49418 695 aa29.64■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms