RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 CABP1Q9NZU7 370 aa25.67■■□□□ 1.7
PBX3-205ENST00000373492 HSPA5P11021 654 aaKnown RBP25.66■■□□□ 1.7
PBX3-205ENST00000373492 ZEB1P37275 1124 aaPredicted RBP25.65■■□□□ 1.7
PBX3-205ENST00000373492 ALS2Q96Q42 1657 aa25.64■■□□□ 1.7
PBX3-205ENST00000373492 HAP1P54257 671 aaPredicted RBP25.64■■□□□ 1.7
PBX3-205ENST00000373492 FNBP4Q8N3X1 1017 aaPredicted RBP25.64■■□□□ 1.7
PBX3-205ENST00000373492 SOCS7O14512 581 aa25.63■■□□□ 1.69
PBX3-205ENST00000373492 CABLES1Q8TDN4 633 aa25.63■■□□□ 1.69
PBX3-205ENST00000373492 PUS7Q96PZ0 661 aaKnown RBP25.63■■□□□ 1.69
PBX3-205ENST00000373492 BRD4O60885 1362 aaPredicted RBP25.63■■□□□ 1.69
PBX3-205ENST00000373492 CDCA8Q53HL2 280 aa25.62■■□□□ 1.69
PBX3-205ENST00000373492 USP21Q9UK80 565 aa25.6■■□□□ 1.69
PBX3-205ENST00000373492 MARF1Q9Y4F3 1742 aaKnown RBP25.6■■□□□ 1.69
PBX3-205ENST00000373492 ZNF692Q9BU19 519 aaPredicted RBP25.59■■□□□ 1.69
PBX3-205ENST00000373492 MON2Q7Z3U7 1717 aa25.59■■□□□ 1.69
PBX3-205ENST00000373492 QTRT2Q9H974 415 aaKnown RBP25.58■■□□□ 1.69
PBX3-205ENST00000373492 USP6P35125 1406 aa25.57■■□□□ 1.68
PBX3-205ENST00000373492 PLEKHG5O94827 1062 aa25.57■■□□□ 1.68
PBX3-205ENST00000373492 RXRBP28702 533 aa25.57■■□□□ 1.68
PBX3-205ENST00000373492 MYOM1P52179 1685 aa25.56■■□□□ 1.68
PBX3-205ENST00000373492 ABTB2Q8N961 1025 aa25.56■■□□□ 1.68
PBX3-205ENST00000373492 ABCA3Q99758 1704 aa25.55■■□□□ 1.68
PBX3-205ENST00000373492 TMC1Q8TDI8 760 aa25.55■■□□□ 1.68
PBX3-205ENST00000373492 TRPC5Q9UL62 973 aaPredicted RBP25.55■■□□□ 1.68
PBX3-205ENST00000373492 NINLQ9Y2I6 1382 aa25.55■■□□□ 1.68
PBX3-205ENST00000373492 BCL9LQ86UU0 1499 aa25.53■■□□□ 1.68
PBX3-205ENST00000373492 SLIT2O94813 1529 aa25.53■■□□□ 1.68
PBX3-205ENST00000373492 RBM6P78332 1123 aaKnown RBP25.53■■□□□ 1.68
PBX3-205ENST00000373492 CPSF1Q10570 1443 aaKnown RBP25.53■■□□□ 1.68
PBX3-205ENST00000373492 SSH2Q76I76 1423 aa25.53■■□□□ 1.68
PBX3-205ENST00000373492 NUTM2GQ5VZR2 741 aa25.51■■□□□ 1.67
PBX3-205ENST00000373492 UNC5CLQ8IV45 518 aa25.51■■□□□ 1.67
PBX3-205ENST00000373492 FAM83GA6ND36 823 aa25.5■■□□□ 1.67
PBX3-205ENST00000373492 ATRNO75882 1429 aa25.5■■□□□ 1.67
PBX3-205ENST00000373492 NRKQ7Z2Y5 1582 aa25.5■■□□□ 1.67
PBX3-205ENST00000373492 NLRP13Q86W25 1043 aa25.5■■□□□ 1.67
PBX3-205ENST00000373492 CDK12Q9NYV4 1490 aaPredicted RBP25.5■■□□□ 1.67
PBX3-205ENST00000373492 CRYBG1Q9Y4K1 1723 aa25.49■■□□□ 1.67
PBX3-205ENST00000373492 KTN1Q86UP2 1357 aaKnown RBP25.48■■□□□ 1.67
PBX3-205ENST00000373492 USP19O94966 1318 aa25.48■■□□□ 1.67
PBX3-205ENST00000373492 HDGFL2Q7Z4V5 671 aaPredicted RBP25.48■■□□□ 1.67
PBX3-205ENST00000373492 SLC12A5Q9H2X9 1139 aa25.48■■□□□ 1.67
PBX3-205ENST00000373492 TTC21BQ7Z4L5 1316 aa25.47■■□□□ 1.67
PBX3-205ENST00000373492 POLR3GLQ9BT43 218 aa25.47■■□□□ 1.67
PBX3-205ENST00000373492 TERF2IPQ9NYB0 399 aa25.47■■□□□ 1.67
PBX3-205ENST00000373492 TTC21AQ8NDW8 1320 aa25.46■■□□□ 1.67
PBX3-205ENST00000373492 CD163L1Q9NR16 1453 aa25.46■■□□□ 1.67
PBX3-205ENST00000373492 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.45■■□□□ 1.66
PBX3-205ENST00000373492 NLRP6P59044 892 aa25.44■■□□□ 1.66
PBX3-205ENST00000373492 PRDM11Q9NQV5 511 aa25.44■■□□□ 1.66
PBX3-205ENST00000373492 NWD2Q9ULI1 1742 aa25.43■■□□□ 1.66
PBX3-205ENST00000373492 PHRF1Q9P1Y6 1649 aaKnown RBP25.43■■□□□ 1.66
PBX3-205ENST00000373492 PIK3C2AO00443 1686 aa25.42■■□□□ 1.66
PBX3-205ENST00000373492 COL14A1Q05707 1796 aaKnown RBP25.42■■□□□ 1.66
PBX3-205ENST00000373492 GCP02774 474 aa25.42■■□□□ 1.66
PBX3-205ENST00000373492 GJD4Q96KN9 370 aaPredicted RBP25.42■■□□□ 1.66
PBX3-205ENST00000373492 A0A1W2PP64 1363 aa25.42■■□□□ 1.66
PBX3-205ENST00000373492 KIAA0232Q92628 1395 aa25.42■■□□□ 1.66
PBX3-205ENST00000373492 KIF20BQ96Q89 1820 aa25.42■■□□□ 1.66
PBX3-205ENST00000373492 ZC3H6P61129 1189 aaKnown RBP25.41■■□□□ 1.66
PBX3-205ENST00000373492 VPS72Q15906 364 aa25.41■■□□□ 1.66
PBX3-205ENST00000373492 BTG4Q9NY30 223 aa25.41■■□□□ 1.66
PBX3-205ENST00000373492 PLCH1Q4KWH8 1693 aa25.41■■□□□ 1.66
PBX3-205ENST00000373492 ANKRD36BQ8N2N9 1353 aa25.41■■□□□ 1.66
PBX3-205ENST00000373492 CPDO75976 1380 aa25.4■■□□□ 1.66
PBX3-205ENST00000373492 RGS12O14924 1447 aa25.38■■□□□ 1.65
PBX3-205ENST00000373492 EDC4Q6P2E9 1401 aaKnown RBP25.38■■□□□ 1.65
PBX3-205ENST00000373492 C11orf95C9JLR9 678 aaPredicted RBP25.38■■□□□ 1.65
PBX3-205ENST00000373492 USP54Q70EL1 1684 aa25.37■■□□□ 1.65
PBX3-205ENST00000373492 SLIT3O75094 1523 aa25.37■■□□□ 1.65
PBX3-205ENST00000373492 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.36■■□□□ 1.65
PBX3-205ENST00000373492 KIF7Q2M1P5 1343 aa25.36■■□□□ 1.65
PBX3-205ENST00000373492 CHRNA2Q15822 529 aa25.35■■□□□ 1.65
PBX3-205ENST00000373492 KCNH5Q8NCM2 988 aa25.35■■□□□ 1.65
PBX3-205ENST00000373492 USP31Q70CQ4 1352 aa25.34■■□□□ 1.65
PBX3-205ENST00000373492 NRAPQ86VF7 1730 aa25.33■■□□□ 1.65
PBX3-205ENST00000373492 CCDC9Q9Y3X0 531 aaKnown RBP25.33■■□□□ 1.65
PBX3-205ENST00000373492 GLI3P10071 1580 aa25.31■■□□□ 1.64
PBX3-205ENST00000373492 NME9Q86XW9 330 aa25.31■■□□□ 1.64
PBX3-205ENST00000373492 CCDC7Q96M83 1385 aa25.31■■□□□ 1.64
PBX3-205ENST00000373492 ONECUT3O60422 494 aaPredicted RBP25.29■■□□□ 1.64
PBX3-205ENST00000373492 ANKRD26Q9UPS8 1709 aa25.29■■□□□ 1.64
PBX3-205ENST00000373492 SPATA31A5Q5VU36 1347 aa25.28■■□□□ 1.64
PBX3-205ENST00000373492 SPATA31A7Q8IWB4 1347 aa25.28■■□□□ 1.64
PBX3-205ENST00000373492 AATKQ6ZMQ8 1374 aa25.28■■□□□ 1.64
PBX3-205ENST00000373492 EVA1CP58658 441 aa25.27■■□□□ 1.64
PBX3-205ENST00000373492 ZRANB1Q9UGI0 708 aa25.27■■□□□ 1.64
PBX3-205ENST00000373492 WASHC2AQ641Q2 1341 aa25.27■■□□□ 1.64
PBX3-205ENST00000373492 LMO7Q8WWI1 1683 aa25.26■■□□□ 1.63
PBX3-205ENST00000373492 LTN1O94822 1766 aa25.26■■□□□ 1.63
PBX3-205ENST00000373492 ARHGEF25Q86VW2 580 aa25.26■■□□□ 1.63
PBX3-205ENST00000373492 NSD3Q9BZ95 1437 aa25.26■■□□□ 1.63
PBX3-205ENST00000373492 CAMTA1Q9Y6Y1 1673 aa25.26■■□□□ 1.63
PBX3-205ENST00000373492 STRN4Q9NRL3 753 aa25.25■■□□□ 1.63
PBX3-205ENST00000373492 PANK3Q9H999 370 aa25.24■■□□□ 1.63
PBX3-205ENST00000373492 NFAT5O94916 1531 aa25.23■■□□□ 1.63
PBX3-205ENST00000373492 ZBTB7CA1YPR0 619 aa25.23■■□□□ 1.63
PBX3-205ENST00000373492 SOX12O15370 315 aa25.23■■□□□ 1.63
PBX3-205ENST00000373492 SEPT12Q8IYM1 358 aa25.23■■□□□ 1.63
PBX3-205ENST00000373492 CARD14Q9BXL6 1004 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms