RNA–Protein interactions for RNA: ENST00000373017.5

LCN2-203, Transcript of lipocalin 2, humanhuman

APPRIS P2 TSL 5 BASIC

Gene LCN2, Length 848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-203ENST00000373017 NBPF8Q3BBV2 869 aa23.84■■□□□ 1.41
LCN2-203ENST00000373017 RALGAPBQ86X10 1494 aa23.83■■□□□ 1.41
LCN2-203ENST00000373017 HAP1P54257 671 aaPredicted RBP23.83■■□□□ 1.41
LCN2-203ENST00000373017 UNC5CLQ8IV45 518 aa23.83■■□□□ 1.41
LCN2-203ENST00000373017 TRIM26Q12899 539 aaPredicted RBP23.82■■□□□ 1.4
LCN2-203ENST00000373017 COL14A1Q05707 1796 aaKnown RBP23.82■■□□□ 1.4
LCN2-203ENST00000373017 GJD4Q96KN9 370 aaPredicted RBP23.81■■□□□ 1.4
LCN2-203ENST00000373017 CCDC61Q9Y6R9 512 aa23.81■■□□□ 1.4
LCN2-203ENST00000373017 ACEP12821 1306 aa23.81■■□□□ 1.4
LCN2-203ENST00000373017 ROCK2O75116 1388 aaKnown RBP23.8■■□□□ 1.4
LCN2-203ENST00000373017 FAM83GA6ND36 823 aa23.8■■□□□ 1.4
LCN2-203ENST00000373017 CABP2Q9NPB3 220 aa23.8■■□□□ 1.4
LCN2-203ENST00000373017 PLEKHG3A1L390 1219 aa23.79■■□□□ 1.4
LCN2-203ENST00000373017 PAK3O75914 559 aaPredicted RBP23.79■■□□□ 1.4
LCN2-203ENST00000373017 PPIP5K1Q6PFW1 1433 aa23.78■■□□□ 1.4
LCN2-203ENST00000373017 SRPK2P78362 688 aaKnown RBP23.77■■□□□ 1.4
LCN2-203ENST00000373017 NRKQ7Z2Y5 1582 aa23.74■■□□□ 1.39
LCN2-203ENST00000373017 AKAP12Q02952 1782 aa23.73■■□□□ 1.39
LCN2-203ENST00000373017 VPS72Q15906 364 aa23.73■■□□□ 1.39
LCN2-203ENST00000373017 NUTM2GQ5VZR2 741 aa23.73■■□□□ 1.39
LCN2-203ENST00000373017 ATAD2Q6PL18 1390 aa23.72■■□□□ 1.39
LCN2-203ENST00000373017 TONSLQ96HA7 1378 aa23.7■■□□□ 1.38
LCN2-203ENST00000373017 BTG4Q9NY30 223 aa23.7■■□□□ 1.38
LCN2-203ENST00000373017 PIK3C2AO00443 1686 aa23.69■■□□□ 1.38
LCN2-203ENST00000373017 KIAA0232Q92628 1395 aa23.68■■□□□ 1.38
LCN2-203ENST00000373017 CABP1Q9NZU7 370 aa23.68■■□□□ 1.38
LCN2-203ENST00000373017 USP6P35125 1406 aa23.67■■□□□ 1.38
LCN2-203ENST00000373017 EVC2Q86UK5 1308 aa23.67■■□□□ 1.38
LCN2-203ENST00000373017 LMO7Q8WWI1 1683 aa23.66■■□□□ 1.38
LCN2-203ENST00000373017 SSH2Q76I76 1423 aa23.66■■□□□ 1.38
LCN2-203ENST00000373017 USP19O94966 1318 aa23.65■■□□□ 1.38
LCN2-203ENST00000373017 ABTB2Q8N961 1025 aa23.65■■□□□ 1.38
LCN2-203ENST00000373017 PRDM11Q9NQV5 511 aa23.65■■□□□ 1.38
LCN2-203ENST00000373017 CCDC9Q9Y3X0 531 aaKnown RBP23.65■■□□□ 1.38
LCN2-203ENST00000373017 ONECUT3O60422 494 aaPredicted RBP23.64■■□□□ 1.37
LCN2-203ENST00000373017 CHRNA2Q15822 529 aa23.64■■□□□ 1.37
LCN2-203ENST00000373017 SEPT12Q8IYM1 358 aa23.64■■□□□ 1.37
LCN2-203ENST00000373017 SBNO2Q9Y2G9 1366 aa23.64■■□□□ 1.37
LCN2-203ENST00000373017 ZC3H6P61129 1189 aaKnown RBP23.63■■□□□ 1.37
LCN2-203ENST00000373017 MON2Q7Z3U7 1717 aa23.63■■□□□ 1.37
LCN2-203ENST00000373017 CARD11Q9BXL7 1154 aa23.63■■□□□ 1.37
LCN2-203ENST00000373017 THSD7AQ9UPZ6 1657 aa23.63■■□□□ 1.37
LCN2-203ENST00000373017 CAMTA1Q9Y6Y1 1673 aa23.61■■□□□ 1.37
LCN2-203ENST00000373017 SLIT3O75094 1523 aa23.6■■□□□ 1.37
LCN2-203ENST00000373017 BRD4O60885 1362 aaPredicted RBP23.6■■□□□ 1.37
LCN2-203ENST00000373017 SPATA31A5Q5VU36 1347 aa23.59■■□□□ 1.37
LCN2-203ENST00000373017 SPATA31A7Q8IWB4 1347 aa23.59■■□□□ 1.37
LCN2-203ENST00000373017 FAM98CQ17RN3 349 aaKnown RBP23.59■■□□□ 1.37
LCN2-203ENST00000373017 CPDO75976 1380 aa23.58■■□□□ 1.37
LCN2-203ENST00000373017 CPSF1Q10570 1443 aaKnown RBP23.58■■□□□ 1.36
LCN2-203ENST00000373017 COL18A1P39060 1754 aa23.57■■□□□ 1.36
LCN2-203ENST00000373017 NLRP13Q86W25 1043 aa23.56■■□□□ 1.36
LCN2-203ENST00000373017 CD163L1Q9NR16 1453 aa23.56■■□□□ 1.36
LCN2-203ENST00000373017 RGPD5Q99666 1765 aa23.55■■□□□ 1.36
LCN2-203ENST00000373017 GCP02774 474 aa23.55■■□□□ 1.36
LCN2-203ENST00000373017 SPATA31A1Q5TZJ5 1347 aa23.54■■□□□ 1.36
LCN2-203ENST00000373017 KRT27Q7Z3Y8 459 aa23.53■■□□□ 1.36
LCN2-203ENST00000373017 STRN4Q9NRL3 753 aa23.53■■□□□ 1.36
LCN2-203ENST00000373017 TTC21BQ7Z4L5 1316 aa23.53■■□□□ 1.36
LCN2-203ENST00000373017 USP54Q70EL1 1684 aa23.52■■□□□ 1.36
LCN2-203ENST00000373017 NLRP6P59044 892 aa23.52■■□□□ 1.36
LCN2-203ENST00000373017 BLMP54132 1417 aaPredicted RBP23.51■■□□□ 1.35
LCN2-203ENST00000373017 A0A0G2JS52 829 aa23.51■■□□□ 1.35
LCN2-203ENST00000373017 MYT1Q01538 1121 aa23.51■■□□□ 1.35
LCN2-203ENST00000373017 COL5A2P05997 1499 aaPredicted RBP23.5■■□□□ 1.35
LCN2-203ENST00000373017 CCDC125Q86Z20 511 aa23.49■■□□□ 1.35
LCN2-203ENST00000373017 TESK2Q96S53 571 aa23.49■■□□□ 1.35
LCN2-203ENST00000373017 ZNF692Q9BU19 519 aaPredicted RBP23.49■■□□□ 1.35
LCN2-203ENST00000373017 KTN1Q86UP2 1357 aaKnown RBP23.49■■□□□ 1.35
LCN2-203ENST00000373017 LARP1Q6PKG0 1096 aaKnown RBP23.48■■□□□ 1.35
LCN2-203ENST00000373017 NFAT5O94916 1531 aa23.48■■□□□ 1.35
LCN2-203ENST00000373017 TNS1Q9HBL0 1735 aaKnown RBP23.47■■□□□ 1.35
LCN2-203ENST00000373017 FAM182BQ5T319 152 aa23.47■■□□□ 1.35
LCN2-203ENST00000373017 WNK3Q9BYP7 1800 aa23.47■■□□□ 1.35
LCN2-203ENST00000373017 ST20-MTHFSA0A0A6YYL1 179 aa23.46■■□□□ 1.35
LCN2-203ENST00000373017 RGPD1P0DJD0 1748 aa23.46■■□□□ 1.35
LCN2-203ENST00000373017 USP35Q9P2H5 1018 aa23.46■■□□□ 1.35
LCN2-203ENST00000373017 TTC21AQ8NDW8 1320 aa23.45■■□□□ 1.34
LCN2-203ENST00000373017 SLC12A5Q9H2X9 1139 aa23.45■■□□□ 1.34
LCN2-203ENST00000373017 PARP4Q9UKK3 1724 aaKnown RBP23.45■■□□□ 1.34
LCN2-203ENST00000373017 AATKQ6ZMQ8 1374 aa23.44■■□□□ 1.34
LCN2-203ENST00000373017 EVA1CP58658 441 aa23.44■■□□□ 1.34
LCN2-203ENST00000373017 DEFB132Q7Z7B7 95 aa23.44■■□□□ 1.34
LCN2-203ENST00000373017 ZRANB1Q9UGI0 708 aa23.44■■□□□ 1.34
LCN2-203ENST00000373017 LTN1O94822 1766 aa23.44■■□□□ 1.34
LCN2-203ENST00000373017 SRCAPQ6ZRS2 3230 aa23.43■■□□□ 1.34
LCN2-203ENST00000373017 ZBTB7CA1YPR0 619 aa23.43■■□□□ 1.34
LCN2-203ENST00000373017 TMC1Q8TDI8 760 aa23.42■■□□□ 1.34
LCN2-203ENST00000373017 A0A1W2PP64 1363 aa23.41■■□□□ 1.34
LCN2-203ENST00000373017 BARGINQ6ZT62 677 aa23.41■■□□□ 1.34
LCN2-203ENST00000373017 PCGF6Q9BYE7 350 aa23.41■■□□□ 1.34
LCN2-203ENST00000373017 AXIN2Q9Y2T1 843 aa23.41■■□□□ 1.34
LCN2-203ENST00000373017 SOX12O15370 315 aa23.4■■□□□ 1.34
LCN2-203ENST00000373017 ARHGEF25Q86VW2 580 aa23.4■■□□□ 1.34
LCN2-203ENST00000373017 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.4■■□□□ 1.34
LCN2-203ENST00000373017 USP31Q70CQ4 1352 aa23.4■■□□□ 1.34
LCN2-203ENST00000373017 USP47Q96K76 1375 aa23.4■■□□□ 1.34
LCN2-203ENST00000373017 NME9Q86XW9 330 aa23.39■■□□□ 1.33
LCN2-203ENST00000373017 PUS7Q96PZ0 661 aaKnown RBP23.39■■□□□ 1.33
LCN2-203ENST00000373017 LRRC37A3O60309 1634 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms