RNA–Protein interactions for RNA: ENST00000372542.5

SNX21-204, Transcript of sorting nexin family member 21, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX21, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-204ENST00000372542 PTCH1Q13635 1447 aa31.05■■■□□ 2.56
SNX21-204ENST00000372542 EXOC6Q8TAG9 804 aa31.05■■■□□ 2.56
SNX21-204ENST00000372542 ZNF692Q9BU19 519 aaPredicted RBP31.05■■■□□ 2.56
SNX21-204ENST00000372542 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.05■■■□□ 2.56
SNX21-204ENST00000372542 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.05■■■□□ 2.56
SNX21-204ENST00000372542 CEP170BQ9Y4F5 1589 aaPredicted RBP31.04■■■□□ 2.56
SNX21-204ENST00000372542 PLPPR3Q6T4P5 718 aa31.04■■■□□ 2.56
SNX21-204ENST00000372542 WDR63Q8IWG1 891 aa31.04■■■□□ 2.56
SNX21-204ENST00000372542 RIMS1Q86UR5 1692 aaKnown RBP31.04■■■□□ 2.56
SNX21-204ENST00000372542 TOPAZ1Q8N9V7 1692 aa31.04■■■□□ 2.56
SNX21-204ENST00000372542 SLC26A8Q96RN1 970 aa31.03■■■□□ 2.56
SNX21-204ENST00000372542 SPINK5Q9NQ38 1064 aaPredicted RBP31.03■■■□□ 2.56
SNX21-204ENST00000372542 PNNQ9H307 717 aaKnown RBP31.01■■■□□ 2.55
SNX21-204ENST00000372542 PRR36Q9H6K5 1346 aa31■■■□□ 2.55
SNX21-204ENST00000372542 DIAPH1O60610 1272 aaKnown RBP31■■■□□ 2.55
SNX21-204ENST00000372542 AMOTL2Q9Y2J4 779 aa30.99■■■□□ 2.55
SNX21-204ENST00000372542 AATKQ6ZMQ8 1374 aa30.98■■■□□ 2.55
SNX21-204ENST00000372542 PLIN1O60240 522 aa30.98■■■□□ 2.55
SNX21-204ENST00000372542 U2SURPO15042 1029 aaKnown RBP30.97■■■□□ 2.55
SNX21-204ENST00000372542 DMRT2Q9Y5R5 561 aa30.97■■■□□ 2.55
SNX21-204ENST00000372542 XRN1Q8IZH2 1706 aaKnown RBP30.96■■■□□ 2.55
SNX21-204ENST00000372542 PIK3R4Q99570 1358 aa30.96■■■□□ 2.55
SNX21-204ENST00000372542 MAP2P11137 1827 aaKnown RBP30.96■■■□□ 2.55
SNX21-204ENST00000372542 ADAMTSL3P82987 1691 aa30.95■■■□□ 2.55
SNX21-204ENST00000372542 PLEKHG3A1L390 1219 aa30.95■■■□□ 2.55
SNX21-204ENST00000372542 PLEKHF1Q96S99 279 aa30.95■■■□□ 2.55
SNX21-204ENST00000372542 POLKQ9UBT6 870 aa30.95■■■□□ 2.55
SNX21-204ENST00000372542 RRP7AQ9Y3A4 280 aaKnown RBP30.95■■■□□ 2.55
SNX21-204ENST00000372542 ZNF142P52746 1687 aaPredicted RBP30.95■■■□□ 2.54
SNX21-204ENST00000372542 NEUROD2Q15784 382 aa30.94■■■□□ 2.54
SNX21-204ENST00000372542 NME9Q86XW9 330 aa30.94■■■□□ 2.54
SNX21-204ENST00000372542 COG3Q96JB2 828 aa30.94■■■□□ 2.54
SNX21-204ENST00000372542 NRKQ7Z2Y5 1582 aa30.92■■■□□ 2.54
SNX21-204ENST00000372542 NCKAP5LQ9HCH0 1330 aa30.92■■■□□ 2.54
SNX21-204ENST00000372542 CRBNQ96SW2 442 aa30.92■■■□□ 2.54
SNX21-204ENST00000372542 RBM19Q9Y4C8 960 aaKnown RBP30.92■■■□□ 2.54
SNX21-204ENST00000372542 CDK12Q9NYV4 1490 aaPredicted RBP30.92■■■□□ 2.54
SNX21-204ENST00000372542 MAPK8IP3Q9UPT6 1336 aa30.92■■■□□ 2.54
SNX21-204ENST00000372542 MYH16Q9H6N6 1097 aa30.88■■■□□ 2.53
SNX21-204ENST00000372542 FCHSD2O94868 740 aa30.87■■■□□ 2.53
SNX21-204ENST00000372542 TMPOP42166 694 aaKnown RBP30.86■■■□□ 2.53
SNX21-204ENST00000372542 ACEP12821 1306 aa30.86■■■□□ 2.53
SNX21-204ENST00000372542 USP6P35125 1406 aa30.85■■■□□ 2.53
SNX21-204ENST00000372542 TTC21BQ7Z4L5 1316 aa30.84■■■□□ 2.53
SNX21-204ENST00000372542 SETD1BQ9UPS6 1966 aaKnown RBP30.84■■■□□ 2.53
SNX21-204ENST00000372542 C20orf194Q5TEA3 1177 aa30.84■■■□□ 2.53
SNX21-204ENST00000372542 LRRC7Q96NW7 1537 aa30.82■■■□□ 2.52
SNX21-204ENST00000372542 PPM1GO15355 546 aaPredicted RBP30.82■■■□□ 2.52
SNX21-204ENST00000372542 ANKLE2Q86XL3 938 aa30.82■■■□□ 2.52
SNX21-204ENST00000372542 ZRANB1Q9UGI0 708 aa30.82■■■□□ 2.52
SNX21-204ENST00000372542 IL16Q14005 1332 aa30.8■■■□□ 2.52
SNX21-204ENST00000372542 NEFMP07197 916 aa30.8■■■□□ 2.52
SNX21-204ENST00000372542 ANKARQ7Z5J8 1434 aa30.8■■■□□ 2.52
SNX21-204ENST00000372542 EMILIN1Q9Y6C2 1016 aa30.8■■■□□ 2.52
SNX21-204ENST00000372542 OVOS2A0A0J9YW53 1432 aa30.79■■■□□ 2.52
SNX21-204ENST00000372542 OVOS2Q6IE36 1432 aa30.79■■■□□ 2.52
SNX21-204ENST00000372542 BCAR3O75815 825 aa30.78■■■□□ 2.52
SNX21-204ENST00000372542 RSPH6AQ9H0K4 717 aa30.78■■■□□ 2.52
SNX21-204ENST00000372542 CT47B1P0C2W7 299 aaPredicted RBP30.77■■■□□ 2.52
SNX21-204ENST00000372542 FBLN1P23142 703 aa30.77■■■□□ 2.52
SNX21-204ENST00000372542 SSH2Q76I76 1423 aa30.77■■■□□ 2.52
SNX21-204ENST00000372542 NALCNQ8IZF0 1738 aa30.77■■■□□ 2.52
SNX21-204ENST00000372542 TTC21AQ8NDW8 1320 aa30.77■■■□□ 2.52
SNX21-204ENST00000372542 IL13P35225 146 aa30.77■■■□□ 2.52
SNX21-204ENST00000372542 DNAJC5Q9H3Z4 198 aa30.77■■■□□ 2.52
SNX21-204ENST00000372542 TRIM35Q9UPQ4 493 aa30.77■■■□□ 2.52
SNX21-204ENST00000372542 PDE3AQ14432 1141 aa30.76■■■□□ 2.51
SNX21-204ENST00000372542 CHD2O14647 1828 aaKnown RBP30.75■■■□□ 2.51
SNX21-204ENST00000372542 NUTM2FA1L443 756 aa30.75■■■□□ 2.51
SNX21-204ENST00000372542 KCNA6P17658 529 aa30.75■■■□□ 2.51
SNX21-204ENST00000372542 RIPK4P57078 832 aa30.74■■■□□ 2.51
SNX21-204ENST00000372542 FMN2Q9NZ56 1722 aa30.73■■■□□ 2.51
SNX21-204ENST00000372542 RARSP54136 660 aaKnown RBP30.73■■■□□ 2.51
SNX21-204ENST00000372542 PRKAR2BP31323 418 aa30.73■■■□□ 2.51
SNX21-204ENST00000372542 USP31Q70CQ4 1352 aa30.72■■■□□ 2.51
SNX21-204ENST00000372542 RGPD8O14715 1765 aaPredicted RBP30.71■■■□□ 2.51
SNX21-204ENST00000372542 RRS1Q15050 365 aaKnown RBP30.7■■■□□ 2.5
SNX21-204ENST00000372542 FANCIQ9NVI1 1328 aa30.69■■■□□ 2.5
SNX21-204ENST00000372542 CANXP27824 592 aaKnown RBP30.68■■■□□ 2.5
SNX21-204ENST00000372542 NFE2L2Q16236 605 aa30.67■■■□□ 2.5
SNX21-204ENST00000372542 NGDNQ8NEJ9 315 aaKnown RBP30.67■■■□□ 2.5
SNX21-204ENST00000372542 TCERG1O14776 1098 aaKnown RBP30.66■■■□□ 2.5
SNX21-204ENST00000372542 PMFBP1Q8TBY8 1022 aa30.65■■■□□ 2.5
SNX21-204ENST00000372542 CENPQQ7L2Z9 268 aaPredicted RBP30.64■■■□□ 2.5
SNX21-204ENST00000372542 HMOX1P09601 288 aa30.63■■■□□ 2.49
SNX21-204ENST00000372542 CALD1Q05682 793 aaKnown RBP30.63■■■□□ 2.49
SNX21-204ENST00000372542 KDM2BQ8NHM5 1336 aa30.63■■■□□ 2.49
SNX21-204ENST00000372542 AAMPQ13685 434 aa30.61■■■□□ 2.49
SNX21-204ENST00000372542 NPHP4O75161 1426 aaPredicted RBP30.6■■■□□ 2.49
SNX21-204ENST00000372542 TSR2Q969E8 191 aaKnown RBP30.6■■■□□ 2.49
SNX21-204ENST00000372542 LMOD3Q0VAK6 560 aa30.59■■■□□ 2.49
SNX21-204ENST00000372542 PHACTR3Q96KR7 559 aa30.59■■■□□ 2.49
SNX21-204ENST00000372542 USP54Q70EL1 1684 aa30.58■■■□□ 2.49
SNX21-204ENST00000372542 PEAK1Q9H792 1746 aa30.58■■■□□ 2.49
SNX21-204ENST00000372542 MS4A1P11836 297 aa30.58■■■□□ 2.49
SNX21-204ENST00000372542 EXOSC9Q06265 439 aaKnown RBP30.58■■■□□ 2.49
SNX21-204ENST00000372542 FRAT1Q92837 279 aaPredicted RBP30.58■■■□□ 2.49
SNX21-204ENST00000372542 PIK3C2AO00443 1686 aa30.58■■■□□ 2.49
SNX21-204ENST00000372542 EIF4A2Q14240 407 aaKnown RBP30.57■■■□□ 2.48
SNX21-204ENST00000372542 ADGRL3Q9HAR2 1447 aa30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms