RNA–Protein interactions for RNA: ENST00000372390.8

TSC22D3-205, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 1,812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-205ENST00000372390 USP6P35125 1406 aa28.28■■■□□ 2.12
TSC22D3-205ENST00000372390 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.27■■■□□ 2.12
TSC22D3-205ENST00000372390 EDC4Q6P2E9 1401 aaKnown RBP28.26■■■□□ 2.11
TSC22D3-205ENST00000372390 PXDNQ92626 1479 aa28.26■■■□□ 2.11
TSC22D3-205ENST00000372390 BRD4O60885 1362 aaPredicted RBP28.25■■■□□ 2.11
TSC22D3-205ENST00000372390 KIF20BQ96Q89 1820 aa28.25■■■□□ 2.11
TSC22D3-205ENST00000372390 DDX17Q92841 729 aaKnown RBP28.25■■■□□ 2.11
TSC22D3-205ENST00000372390 CGNL1Q0VF96 1302 aa28.24■■■□□ 2.11
TSC22D3-205ENST00000372390 XPCQ01831 940 aaPredicted RBP28.23■■■□□ 2.11
TSC22D3-205ENST00000372390 KRT28Q7Z3Y7 464 aa28.23■■■□□ 2.11
TSC22D3-205ENST00000372390 PHLPP1O60346 1717 aa28.23■■■□□ 2.11
TSC22D3-205ENST00000372390 NPC1L1Q9UHC9 1359 aa28.23■■■□□ 2.11
TSC22D3-205ENST00000372390 SSH2Q76I76 1423 aa28.22■■■□□ 2.11
TSC22D3-205ENST00000372390 SOS2Q07890 1332 aaPredicted RBP28.22■■■□□ 2.11
TSC22D3-205ENST00000372390 TTC21BQ7Z4L5 1316 aa28.21■■■□□ 2.11
TSC22D3-205ENST00000372390 PARD3Q8TEW0 1356 aa28.21■■■□□ 2.11
TSC22D3-205ENST00000372390 TRPM3Q9HCF6 1732 aaPredicted RBP28.2■■■□□ 2.11
TSC22D3-205ENST00000372390 FYB1O15117 783 aa28.2■■■□□ 2.11
TSC22D3-205ENST00000372390 GGNBP2Q9H3C7 697 aa28.2■■■□□ 2.11
TSC22D3-205ENST00000372390 SBNO1A3KN83 1393 aa28.2■■■□□ 2.1
TSC22D3-205ENST00000372390 NME9Q86XW9 330 aa28.2■■■□□ 2.1
TSC22D3-205ENST00000372390 FBXO41Q8TF61 875 aa28.19■■■□□ 2.1
TSC22D3-205ENST00000372390 ZRANB1Q9UGI0 708 aa28.19■■■□□ 2.1
TSC22D3-205ENST00000372390 COL16A1Q07092 1604 aaPredicted RBP28.18■■■□□ 2.1
TSC22D3-205ENST00000372390 ANKRD26Q9UPS8 1709 aa28.18■■■□□ 2.1
TSC22D3-205ENST00000372390 PAK3O75914 559 aaPredicted RBP28.18■■■□□ 2.1
TSC22D3-205ENST00000372390 TNS3Q68CZ2 1445 aa28.17■■■□□ 2.1
TSC22D3-205ENST00000372390 TTC21AQ8NDW8 1320 aa28.17■■■□□ 2.1
TSC22D3-205ENST00000372390 RALBP1Q15311 655 aa28.15■■■□□ 2.1
TSC22D3-205ENST00000372390 PIK3C2AO00443 1686 aa28.14■■■□□ 2.1
TSC22D3-205ENST00000372390 NSD2O96028 1365 aa28.14■■■□□ 2.1
TSC22D3-205ENST00000372390 SPATA31A3Q5VYP0 1347 aa28.13■■■□□ 2.09
TSC22D3-205ENST00000372390 LRRC59Q96AG4 307 aaKnown RBP28.13■■■□□ 2.09
TSC22D3-205ENST00000372390 ALS2Q96Q42 1657 aa28.13■■■□□ 2.09
TSC22D3-205ENST00000372390 ARHGEF10O15013 1369 aa28.12■■■□□ 2.09
TSC22D3-205ENST00000372390 MORC1Q86VD1 984 aa28.12■■■□□ 2.09
TSC22D3-205ENST00000372390 TNNT2P45379 298 aaPredicted RBP28.11■■■□□ 2.09
TSC22D3-205ENST00000372390 CCDC184Q52MB2 194 aa28.1■■■□□ 2.09
TSC22D3-205ENST00000372390 LMOD2Q6P5Q4 547 aa28.1■■■□□ 2.09
TSC22D3-205ENST00000372390 ABTB2Q8N961 1025 aa28.09■■■□□ 2.09
TSC22D3-205ENST00000372390 MYBBP1AQ9BQG0 1328 aaKnown RBP28.09■■■□□ 2.09
TSC22D3-205ENST00000372390 HSPA1LP34931 641 aa28.08■■■□□ 2.09
TSC22D3-205ENST00000372390 MARF1Q9Y4F3 1742 aaKnown RBP28.08■■■□□ 2.09
TSC22D3-205ENST00000372390 NUTM2GQ5VZR2 741 aa28.07■■■□□ 2.08
TSC22D3-205ENST00000372390 PPP2R1AP30153 589 aa28.06■■■□□ 2.08
TSC22D3-205ENST00000372390 OVOS2A0A0J9YW53 1432 aa28.06■■■□□ 2.08
TSC22D3-205ENST00000372390 OVOS2Q6IE36 1432 aa28.06■■■□□ 2.08
TSC22D3-205ENST00000372390 FBLN1P23142 703 aa28.04■■■□□ 2.08
TSC22D3-205ENST00000372390 COG3Q96JB2 828 aa28.04■■■□□ 2.08
TSC22D3-205ENST00000372390 MED1Q15648 1581 aaPredicted RBP28.03■■■□□ 2.08
TSC22D3-205ENST00000372390 USP54Q70EL1 1684 aa28.03■■■□□ 2.08
TSC22D3-205ENST00000372390 CCER2I3L3R5 266 aa28.03■■■□□ 2.08
TSC22D3-205ENST00000372390 NLRP6P59044 892 aa28.03■■■□□ 2.08
TSC22D3-205ENST00000372390 USP31Q70CQ4 1352 aa28.02■■■□□ 2.08
TSC22D3-205ENST00000372390 PNPLA6Q8IY17 1366 aa28.02■■■□□ 2.08
TSC22D3-205ENST00000372390 JCADQ9P266 1359 aa28.02■■■□□ 2.08
TSC22D3-205ENST00000372390 NLRP13Q86W25 1043 aa28.02■■■□□ 2.08
TSC22D3-205ENST00000372390 SHPRHQ149N8 1683 aa28.02■■■□□ 2.08
TSC22D3-205ENST00000372390 COL22A1Q8NFW1 1626 aaPredicted RBP28.01■■■□□ 2.07
TSC22D3-205ENST00000372390 MAP2P11137 1827 aaKnown RBP27.97■■■□□ 2.07
TSC22D3-205ENST00000372390 USP19O94966 1318 aa27.97■■■□□ 2.07
TSC22D3-205ENST00000372390 MRS2Q9HD23 443 aa27.97■■■□□ 2.07
TSC22D3-205ENST00000372390 SOX12O15370 315 aa27.96■■■□□ 2.07
TSC22D3-205ENST00000372390 PLEKHG5O94827 1062 aa27.96■■■□□ 2.07
TSC22D3-205ENST00000372390 SLIT3O75094 1523 aa27.95■■■□□ 2.06
TSC22D3-205ENST00000372390 CRYBG1Q9Y4K1 1723 aa27.95■■■□□ 2.06
TSC22D3-205ENST00000372390 PHRF1Q9P1Y6 1649 aaKnown RBP27.95■■■□□ 2.06
TSC22D3-205ENST00000372390 ABCA3Q99758 1704 aa27.94■■■□□ 2.06
TSC22D3-205ENST00000372390 MTHFSP49914 203 aa27.92■■■□□ 2.06
TSC22D3-205ENST00000372390 HAP1P54257 671 aaPredicted RBP27.92■■■□□ 2.06
TSC22D3-205ENST00000372390 RRS1Q15050 365 aaKnown RBP27.91■■■□□ 2.06
TSC22D3-205ENST00000372390 KCNH5Q8NCM2 988 aa27.91■■■□□ 2.06
TSC22D3-205ENST00000372390 SPATA31A6Q5VVP1 1343 aa27.91■■■□□ 2.06
TSC22D3-205ENST00000372390 CABLES1Q8TDN4 633 aa27.9■■■□□ 2.06
TSC22D3-205ENST00000372390 POLKQ9UBT6 870 aa27.9■■■□□ 2.06
TSC22D3-205ENST00000372390 EMILIN1Q9Y6C2 1016 aa27.9■■■□□ 2.06
TSC22D3-205ENST00000372390 AATKQ6ZMQ8 1374 aa27.9■■■□□ 2.06
TSC22D3-205ENST00000372390 GCP02774 474 aa27.88■■■□□ 2.05
TSC22D3-205ENST00000372390 NFAT5O94916 1531 aa27.87■■■□□ 2.05
TSC22D3-205ENST00000372390 PEAK1Q9H792 1746 aa27.86■■■□□ 2.05
TSC22D3-205ENST00000372390 PPM1GO15355 546 aaPredicted RBP27.85■■■□□ 2.05
TSC22D3-205ENST00000372390 SMG6Q86US8 1419 aaKnown RBP27.84■■■□□ 2.05
TSC22D3-205ENST00000372390 LTN1O94822 1766 aa27.83■■■□□ 2.05
TSC22D3-205ENST00000372390 NUTM2BA6NNL0 878 aaPredicted RBP27.83■■■□□ 2.05
TSC22D3-205ENST00000372390 NUTM2EB1AL46 878 aaPredicted RBP27.83■■■□□ 2.05
TSC22D3-205ENST00000372390 NUTM2AQ8IVF1 878 aaPredicted RBP27.83■■■□□ 2.05
TSC22D3-205ENST00000372390 MAP3K19Q56UN5 1328 aa27.83■■■□□ 2.04
TSC22D3-205ENST00000372390 PNISRQ8TF01 805 aaKnown RBP27.81■■■□□ 2.04
TSC22D3-205ENST00000372390 COL3A1P02461 1466 aaPredicted RBP27.81■■■□□ 2.04
TSC22D3-205ENST00000372390 CPDO75976 1380 aa27.8■■■□□ 2.04
TSC22D3-205ENST00000372390 FAM9BQ8IZU0 186 aa27.8■■■□□ 2.04
TSC22D3-205ENST00000372390 CDK12Q9NYV4 1490 aaPredicted RBP27.79■■■□□ 2.04
TSC22D3-205ENST00000372390 KIAA0232Q92628 1395 aa27.79■■■□□ 2.04
TSC22D3-205ENST00000372390 ZC3H6P61129 1189 aaKnown RBP27.78■■■□□ 2.04
TSC22D3-205ENST00000372390 ILDR1Q86SU0 546 aaPredicted RBP27.78■■■□□ 2.04
TSC22D3-205ENST00000372390 LRP6O75581 1613 aa27.78■■■□□ 2.04
TSC22D3-205ENST00000372390 PRDM11Q9NQV5 511 aa27.77■■■□□ 2.04
TSC22D3-205ENST00000372390 ADAMTS2O95450 1211 aa27.76■■■□□ 2.04
TSC22D3-205ENST00000372390 CFAP53Q96M91 514 aa27.76■■■□□ 2.04
TSC22D3-205ENST00000372390 ZBTB7CA1YPR0 619 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms