RNA–Protein interactions for RNA: ENST00000371974.7

SURF1-201, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SURF1, Length 1,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-201ENST00000371974 TESK2Q96S53 571 aa35.65■■■■□ 3.3
SURF1-201ENST00000371974 ALS2Q96Q42 1657 aa35.64■■■■□ 3.3
SURF1-201ENST00000371974 PUS7Q96PZ0 661 aaKnown RBP35.62■■■■□ 3.29
SURF1-201ENST00000371974 BRD4O60885 1362 aaPredicted RBP35.61■■■■□ 3.29
SURF1-201ENST00000371974 ZNF692Q9BU19 519 aaPredicted RBP35.6■■■■□ 3.29
SURF1-201ENST00000371974 FNBP4Q8N3X1 1017 aaPredicted RBP35.58■■■■□ 3.29
SURF1-201ENST00000371974 ABTB2Q8N961 1025 aa35.57■■■■□ 3.28
SURF1-201ENST00000371974 USP21Q9UK80 565 aa35.56■■■■□ 3.28
SURF1-201ENST00000371974 MARF1Q9Y4F3 1742 aaKnown RBP35.56■■■■□ 3.28
SURF1-201ENST00000371974 USP6P35125 1406 aa35.56■■■■□ 3.28
SURF1-201ENST00000371974 TMF1P82094 1093 aa35.55■■■■□ 3.28
SURF1-201ENST00000371974 TMC1Q8TDI8 760 aa35.55■■■■□ 3.28
SURF1-201ENST00000371974 NUTM2GQ5VZR2 741 aa35.53■■■■□ 3.28
SURF1-201ENST00000371974 QTRT2Q9H974 415 aaKnown RBP35.53■■■■□ 3.28
SURF1-201ENST00000371974 ABCA3Q99758 1704 aa35.51■■■■□ 3.27
SURF1-201ENST00000371974 RXRBP28702 533 aa35.5■■■■□ 3.27
SURF1-201ENST00000371974 CPSF1Q10570 1443 aaKnown RBP35.49■■■■□ 3.27
SURF1-201ENST00000371974 NLRP13Q86W25 1043 aa35.49■■■■□ 3.27
SURF1-201ENST00000371974 SLC12A5Q9H2X9 1139 aa35.48■■■■□ 3.27
SURF1-201ENST00000371974 KTN1Q86UP2 1357 aaKnown RBP35.48■■■■□ 3.27
SURF1-201ENST00000371974 CDCA8Q53HL2 280 aa35.47■■■■□ 3.27
SURF1-201ENST00000371974 HDGFL2Q7Z4V5 671 aaPredicted RBP35.47■■■■□ 3.27
SURF1-201ENST00000371974 TRPC5Q9UL62 973 aaPredicted RBP35.47■■■■□ 3.27
SURF1-201ENST00000371974 SSH2Q76I76 1423 aa35.47■■■■□ 3.27
SURF1-201ENST00000371974 SOCS7O14512 581 aa35.46■■■■□ 3.27
SURF1-201ENST00000371974 EIF4G2P78344 907 aaKnown RBP eCLIP35.45■■■■□ 3.27
SURF1-201ENST00000371974 TERF2IPQ9NYB0 399 aa35.45■■■■□ 3.27
SURF1-201ENST00000371974 AKAP12Q02952 1782 aa35.45■■■■□ 3.27
SURF1-201ENST00000371974 NINLQ9Y2I6 1382 aa35.44■■■■□ 3.26
SURF1-201ENST00000371974 TTC21BQ7Z4L5 1316 aa35.44■■■■□ 3.26
SURF1-201ENST00000371974 BCL9LQ86UU0 1499 aa35.43■■■■□ 3.26
SURF1-201ENST00000371974 FAM83GA6ND36 823 aa35.43■■■■□ 3.26
SURF1-201ENST00000371974 RBM6P78332 1123 aaKnown RBP35.43■■■■□ 3.26
SURF1-201ENST00000371974 SLIT2O94813 1529 aa35.42■■■■□ 3.26
SURF1-201ENST00000371974 TTC21AQ8NDW8 1320 aa35.42■■■■□ 3.26
SURF1-201ENST00000371974 NLRP6P59044 892 aa35.42■■■■□ 3.26
SURF1-201ENST00000371974 UNC5CLQ8IV45 518 aa35.42■■■■□ 3.26
SURF1-201ENST00000371974 CRYBG1Q9Y4K1 1723 aa35.42■■■■□ 3.26
SURF1-201ENST00000371974 USP19O94966 1318 aa35.4■■■■□ 3.26
SURF1-201ENST00000371974 PRDM11Q9NQV5 511 aa35.39■■■■□ 3.26
SURF1-201ENST00000371974 CD163L1Q9NR16 1453 aa35.39■■■■□ 3.26
SURF1-201ENST00000371974 ATRNO75882 1429 aa35.38■■■■□ 3.25
SURF1-201ENST00000371974 PHRF1Q9P1Y6 1649 aaKnown RBP35.36■■■■□ 3.25
SURF1-201ENST00000371974 HSPA5P11021 654 aaKnown RBP35.36■■■■□ 3.25
SURF1-201ENST00000371974 ZC3H6P61129 1189 aaKnown RBP35.36■■■■□ 3.25
SURF1-201ENST00000371974 GCP02774 474 aa35.35■■■■□ 3.25
SURF1-201ENST00000371974 KIAA0232Q92628 1395 aa35.35■■■■□ 3.25
SURF1-201ENST00000371974 MON2Q7Z3U7 1717 aa35.35■■■■□ 3.25
SURF1-201ENST00000371974 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.34■■■■□ 3.25
SURF1-201ENST00000371974 A0A1W2PP64 1363 aa35.34■■■■□ 3.25
SURF1-201ENST00000371974 BTG4Q9NY30 223 aa35.33■■■■□ 3.25
SURF1-201ENST00000371974 CDK12Q9NYV4 1490 aaPredicted RBP35.33■■■■□ 3.25
SURF1-201ENST00000371974 COL14A1Q05707 1796 aaKnown RBP35.33■■■■□ 3.25
SURF1-201ENST00000371974 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.32■■■■□ 3.25
SURF1-201ENST00000371974 NRKQ7Z2Y5 1582 aa35.32■■■■□ 3.24
SURF1-201ENST00000371974 PLCH1Q4KWH8 1693 aa35.32■■■■□ 3.24
SURF1-201ENST00000371974 NWD2Q9ULI1 1742 aa35.32■■■■□ 3.24
SURF1-201ENST00000371974 EDC4Q6P2E9 1401 aaKnown RBP35.32■■■■□ 3.24
SURF1-201ENST00000371974 PIK3C2AO00443 1686 aa35.31■■■■□ 3.24
SURF1-201ENST00000371974 GJD4Q96KN9 370 aaPredicted RBP35.31■■■■□ 3.24
SURF1-201ENST00000371974 CHRNA2Q15822 529 aa35.28■■■■□ 3.24
SURF1-201ENST00000371974 VPS72Q15906 364 aa35.28■■■■□ 3.24
SURF1-201ENST00000371974 CPDO75976 1380 aa35.27■■■■□ 3.24
SURF1-201ENST00000371974 ANKRD36BQ8N2N9 1353 aa35.27■■■■□ 3.24
SURF1-201ENST00000371974 KCNH5Q8NCM2 988 aa35.26■■■■□ 3.24
SURF1-201ENST00000371974 CCDC9Q9Y3X0 531 aaKnown RBP35.26■■■■□ 3.24
SURF1-201ENST00000371974 SLIT3O75094 1523 aa35.25■■■■□ 3.23
SURF1-201ENST00000371974 NME9Q86XW9 330 aa35.24■■■■□ 3.23
SURF1-201ENST00000371974 USP31Q70CQ4 1352 aa35.23■■■■□ 3.23
SURF1-201ENST00000371974 RGS12O14924 1447 aa35.21■■■■□ 3.23
SURF1-201ENST00000371974 ZBTB7CA1YPR0 619 aa35.19■■■■□ 3.22
SURF1-201ENST00000371974 POLR3GLQ9BT43 218 aa35.19■■■■□ 3.22
SURF1-201ENST00000371974 ZRANB1Q9UGI0 708 aa35.19■■■■□ 3.22
SURF1-201ENST00000371974 NRAPQ86VF7 1730 aa35.18■■■■□ 3.22
SURF1-201ENST00000371974 SOX12O15370 315 aa35.17■■■■□ 3.22
SURF1-201ENST00000371974 EVA1CP58658 441 aa35.16■■■■□ 3.22
SURF1-201ENST00000371974 STRN4Q9NRL3 753 aa35.15■■■■□ 3.22
SURF1-201ENST00000371974 GLI3P10071 1580 aa35.14■■■■□ 3.22
SURF1-201ENST00000371974 AATKQ6ZMQ8 1374 aa35.13■■■■□ 3.21
SURF1-201ENST00000371974 ARHGEF25Q86VW2 580 aa35.12■■■■□ 3.21
SURF1-201ENST00000371974 USP54Q70EL1 1684 aa35.11■■■■□ 3.21
SURF1-201ENST00000371974 CAMTA1Q9Y6Y1 1673 aa35.11■■■■□ 3.21
SURF1-201ENST00000371974 SPATA31A5Q5VU36 1347 aa35.1■■■■□ 3.21
SURF1-201ENST00000371974 SPATA31A7Q8IWB4 1347 aa35.1■■■■□ 3.21
SURF1-201ENST00000371974 COG3Q96JB2 828 aa35.1■■■■□ 3.21
SURF1-201ENST00000371974 MYOM1P52179 1685 aa35.1■■■■□ 3.21
SURF1-201ENST00000371974 LMO7Q8WWI1 1683 aa35.09■■■■□ 3.21
SURF1-201ENST00000371974 OVOS2A0A0J9YW53 1432 aa35.07■■■■□ 3.21
SURF1-201ENST00000371974 OVOS2Q6IE36 1432 aa35.07■■■■□ 3.21
SURF1-201ENST00000371974 NFAT5O94916 1531 aa35.07■■■■□ 3.21
SURF1-201ENST00000371974 ONECUT3O60422 494 aaPredicted RBP35.07■■■■□ 3.2
SURF1-201ENST00000371974 CARD14Q9BXL6 1004 aa35.05■■■■□ 3.2
SURF1-201ENST00000371974 FYB1O15117 783 aa35.04■■■■□ 3.2
SURF1-201ENST00000371974 FAM98CQ17RN3 349 aaKnown RBP35.04■■■■□ 3.2
SURF1-201ENST00000371974 SEPT12Q8IYM1 358 aa35.04■■■■□ 3.2
SURF1-201ENST00000371974 SPATA31A1Q5TZJ5 1347 aa35.04■■■■□ 3.2
SURF1-201ENST00000371974 C11orf95C9JLR9 678 aaPredicted RBP35.03■■■■□ 3.2
SURF1-201ENST00000371974 LARP1Q6PKG0 1096 aaKnown RBP35.03■■■■□ 3.2
SURF1-201ENST00000371974 A0A0G2JS52 829 aa35.02■■■■□ 3.2
SURF1-201ENST00000371974 MYT1Q01538 1121 aa35.02■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms